RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 RNF146Q9NTX7 359 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 TCEAL9Q9UHQ7 104 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 AJAP1Q9UKB5 411 aaPredicted RBP14.25□□□□□ -0.13
GARNL3-220ENST00000496711 L1RE1Q9UN81 338 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 LCTP09848 1927 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 BTNL10A8MVZ5 291 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 NCK2O43639 380 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 YWHABP31946 246 aaKnown RBP14.25□□□□□ -0.13
GARNL3-220ENST00000496711 TERF2Q15554 542 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 CCDC181Q5TID7 509 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 ARHGEF16Q5VV41 709 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 CCDC70Q6NSX1 233 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 NSMFQ6X4W1 530 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 APOBEC3FQ8IUX4 373 aaKnown RBP14.25□□□□□ -0.13
GARNL3-220ENST00000496711 MSL3Q8N5Y2 521 aaKnown RBP14.25□□□□□ -0.13
GARNL3-220ENST00000496711 TIPINQ9BVW5 301 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 TLR10Q9BXR5 811 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 PACSIN1Q9BY11 444 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 TMEM206Q9H813 350 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 ZNF112Q9UJU3 913 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 PCDHGC5Q9Y5F6 944 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 WDR64B1ANS9 1081 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 EXOC3O60645 756 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 PALMO75781 387 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 PLS3P13797 630 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 FERP16591 822 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 OAS2P29728 719 aaKnown RBP14.24□□□□□ -0.13
GARNL3-220ENST00000496711 SFNP31947 248 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 KRT76Q01546 638 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 BFSP1Q12934 665 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 MAP9Q49MG5 647 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 XRRA1Q6P2D8 792 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 MAEAQ7L5Y9 396 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 VPS36Q86VN1 386 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 C4orf19Q8IY42 314 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 MMGT1Q8N4V1 131 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 ZNF280CQ8ND82 737 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 WRNIP1Q96S55 665 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 PICK1Q9NRD5 415 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 DAAM1Q9Y4D1 1078 aa14.24□□□□□ -0.13
GARNL3-220ENST00000496711 TESPA1A2RU30 521 aaPredicted RBP14.23□□□□□ -0.13
GARNL3-220ENST00000496711 EIF3JO75822 258 aaKnown RBP14.23□□□□□ -0.13
GARNL3-220ENST00000496711 STAT1P42224 750 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 PSMC5P62195 406 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 FAM193AP78312 1265 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 MYL7Q01449 175 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 GPS2Q13227 327 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 PLS1Q14651 629 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 UGCGQ16739 394 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 GJB7Q6PEY0 223 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 WNK4Q96J92 1243 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 C12orf42Q96LP6 360 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 ACCSQ96QU6 501 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 NAGPAQ9UK23 515 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 NENFQ9UMX5 172 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 PTPRFP10586 1907 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 TRIM49P0CI25 452 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 TRIM49CP0CI26 452 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 PTPRAP18433 802 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 CCND2P30279 289 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 PAFAH1B1P43034 410 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 OAZ1P54368 228 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 CBWD6Q4V339 395 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 CBWD3Q5JTY5 395 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 CBWD5Q5RIA9 395 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 C12orf56Q8IXR9 622 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 SPATA4Q8NEY3 305 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 REPS2Q8NFH8 660 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 TMEM174Q8WUU8 243 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 RUBCNQ92622 972 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 ZKSCAN4Q969J2 545 aaPredicted RBP14.23□□□□□ -0.13
GARNL3-220ENST00000496711 PSMB7Q99436 277 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 SUGCTQ9HAC7 445 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 ZNF541Q9H0D2 1346 aa14.23□□□□□ -0.13
GARNL3-220ENST00000496711 F8VZ95 297 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 BACH1O14867 736 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 ATP9AO75110 1047 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 CCNE2O96020 404 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 KRT13P13646 458 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 CXCR5P32302 372 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 MYH9P35579 1960 aaKnown RBP14.22□□□□□ -0.13
GARNL3-220ENST00000496711 SOX5P35711 763 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 BAATQ14032 418 aaPredicted RBP14.22□□□□□ -0.13
GARNL3-220ENST00000496711 CASP8Q14790 479 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 ANGEL2Q5VTE6 544 aaKnown RBP14.22□□□□□ -0.13
GARNL3-220ENST00000496711 SNRNP48Q6IEG0 339 aaKnown RBP14.22□□□□□ -0.13
GARNL3-220ENST00000496711 ALKBH5Q6P6C2 394 aaKnown RBP14.22□□□□□ -0.13
GARNL3-220ENST00000496711 FMNL3Q8IVF7 1028 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 RDM1Q8NG50 284 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 GPRASP2Q96D09 838 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 INTS2Q9H0H0 1204 aaKnown RBP14.22□□□□□ -0.13
GARNL3-220ENST00000496711 ST6GALNAC4Q9H4F1 302 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 RNF14Q9UBS8 474 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 RIPK3Q9Y572 518 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 CD2APQ9Y5K6 639 aa14.22□□□□□ -0.13
GARNL3-220ENST00000496711 GRID2IPA4D2P6 1211 aa14.21□□□□□ -0.13
GARNL3-220ENST00000496711 GFPT2O94808 682 aa14.21□□□□□ -0.13
GARNL3-220ENST00000496711 FTCDO95954 541 aa14.21□□□□□ -0.13
GARNL3-220ENST00000496711 RFX1P22670 979 aa14.21□□□□□ -0.13
GARNL3-220ENST00000496711 HMGCS2P54868 508 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms