RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 NBR1Q14596 966 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 ZNF174Q15697 407 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 CLP1Q92989 425 aaKnown RBP13.8□□□□□ -0.2
TRIM59-207ENST00000496222 ADAM2Q99965 735 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 PRDM6Q9NQX0 595 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 RGS18Q9NS28 235 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 MTUS1Q9ULD2 1270 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 PPME1Q9Y570 386 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 RALGAPA2Q2PPJ7 1873 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 POTEMA6NI47 508 aa13.79□□□□□ -0.2
TRIM59-207ENST00000496222 GPR182O15218 404 aa13.79□□□□□ -0.2
TRIM59-207ENST00000496222 DKC1O60832 514 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRIM59-207ENST00000496222 CSDE1O75534 798 aaKnown RBP13.79□□□□□ -0.2
TRIM59-207ENST00000496222 GJB2P29033 226 aa13.79□□□□□ -0.2
TRIM59-207ENST00000496222 SARSP49591 514 aaKnown RBP13.79□□□□□ -0.2
TRIM59-207ENST00000496222 CUL4AQ13619 759 aa13.79□□□□□ -0.2
TRIM59-207ENST00000496222 EPC2Q52LR7 807 aa13.79□□□□□ -0.2
TRIM59-207ENST00000496222 TTC38Q5R3I4 469 aa13.79□□□□□ -0.2
TRIM59-207ENST00000496222 NPAS4Q8IUM7 802 aa13.79□□□□□ -0.2
TRIM59-207ENST00000496222 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRIM59-207ENST00000496222 TPH2Q8IWU9 490 aa13.79□□□□□ -0.2
TRIM59-207ENST00000496222 GDPD5Q8WTR4 605 aa13.79□□□□□ -0.2
TRIM59-207ENST00000496222 CEP170P1Q96L14 293 aa13.79□□□□□ -0.2
TRIM59-207ENST00000496222 XPNPEP1Q9NQW7 623 aa13.79□□□□□ -0.2
TRIM59-207ENST00000496222 SUCLA2Q9P2R7 463 aaPredicted RBP13.79□□□□□ -0.2
TRIM59-207ENST00000496222 ADGRA3Q8IWK6 1321 aa13.79□□□□□ -0.2
TRIM59-207ENST00000496222 FNDC1Q4ZHG4 1894 aaPredicted RBP13.78□□□□□ -0.2
TRIM59-207ENST00000496222 OR52Z1P0C646 297 aa13.78□□□□□ -0.2
TRIM59-207ENST00000496222 FGFR4P22455 802 aa13.78□□□□□ -0.2
TRIM59-207ENST00000496222 CDC42EP1Q00587 391 aa13.78□□□□□ -0.2
TRIM59-207ENST00000496222 CCDC85BQ15834 202 aaPredicted RBP13.78□□□□□ -0.2
TRIM59-207ENST00000496222 SLC24A5Q71RS6 500 aa13.78□□□□□ -0.2
TRIM59-207ENST00000496222 KSR1Q8IVT5 923 aa13.78□□□□□ -0.2
TRIM59-207ENST00000496222 TMEM192Q8IY95 271 aa13.78□□□□□ -0.2
TRIM59-207ENST00000496222 NEK9Q8TD19 979 aa13.78□□□□□ -0.2
TRIM59-207ENST00000496222 IFT122Q9HBG6 1241 aa13.78□□□□□ -0.2
TRIM59-207ENST00000496222 ANKEF1Q9NU02 776 aa13.78□□□□□ -0.2
TRIM59-207ENST00000496222 PCDHB6Q9Y5E3 794 aa13.78□□□□□ -0.2
TRIM59-207ENST00000496222 GTF3C3Q9Y5Q9 886 aa13.78□□□□□ -0.2
TRIM59-207ENST00000496222 KIAA1671Q9BY89 1806 aa13.78□□□□□ -0.2
TRIM59-207ENST00000496222 A0A087WWV3 80 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 A0A087WZ62 844 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 C5orf67F2Z3F1 127 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 H3BNC9 293 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 MED24O75448 989 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 RFC5P40937 340 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 TECP42680 631 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 GATMP50440 423 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 DNM2P50570 870 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 IL17AQ16552 155 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 ATG2AQ2TAZ0 1938 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 ODR4Q5SWX8 454 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 OTUD6AQ7L8S5 288 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 ZNF410Q86VK4 478 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 CATSPER3Q86XQ3 398 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 RHPN2Q8IUC4 686 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 FBXO22Q8NEZ5 403 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 PRPF31Q8WWY3 499 aaKnown RBP13.77□□□□□ -0.21
TRIM59-207ENST00000496222 PPM1EQ8WY54 764 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 TMEM143Q96AN5 459 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 SAMD11Q96NU1 681 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 JPH2Q9BR39 696 aaPredicted RBP13.77□□□□□ -0.21
TRIM59-207ENST00000496222 FDXACB1Q9BRP7 624 aaPredicted RBP13.77□□□□□ -0.21
TRIM59-207ENST00000496222 POLR3CQ9BUI4 534 aaPredicted RBP13.77□□□□□ -0.21
TRIM59-207ENST00000496222 C1orf112Q9NSG2 853 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 RNF19AQ9NV58 838 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 LMCD1Q9NZU5 365 aa13.77□□□□□ -0.21
TRIM59-207ENST00000496222 DENND3A2RUS2 1198 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 STAG3L1P0CL83 205 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 XRCC6P12956 609 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRIM59-207ENST00000496222 BMPR1AP36894 532 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 RARRES1P49788 294 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRIM59-207ENST00000496222 EMC2Q15006 297 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 XKR9Q5GH70 373 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 FAM102BQ5T8I3 360 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 EXOC8Q8IYI6 725 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 CMTR2Q8IYT2 770 aaKnown RBP13.76□□□□□ -0.21
TRIM59-207ENST00000496222 FIBCD1Q8N539 461 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 PIGOQ8TEQ8 1089 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 NLRP7Q8WX94 980 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 SLC7A3Q8WY07 619 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 GCOM2Q9BZD3 368 aaPredicted RBP13.76□□□□□ -0.21
TRIM59-207ENST00000496222 ELAC1Q9H777 363 aaKnown RBP13.76□□□□□ -0.21
TRIM59-207ENST00000496222 MINDY3Q9H8M7 445 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 TUFT1Q9NNX1 390 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.76□□□□□ -0.21
TRIM59-207ENST00000496222 KIF3AQ9Y496 699 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 COL4A3BPQ9Y5P4 624 aa13.76□□□□□ -0.21
TRIM59-207ENST00000496222 MRPL42Q9Y6G3 142 aaKnown RBP13.76□□□□□ -0.21
TRIM59-207ENST00000496222 GAS2O43903 313 aaKnown RBP13.75□□□□□ -0.21
TRIM59-207ENST00000496222 ATF7P17544 494 aaPredicted RBP13.75□□□□□ -0.21
TRIM59-207ENST00000496222 RPA1P27694 616 aa13.75□□□□□ -0.21
TRIM59-207ENST00000496222 POLGP54098 1239 aaPredicted RBP13.75□□□□□ -0.21
TRIM59-207ENST00000496222 LAMTOR4Q0VGL1 99 aa13.75□□□□□ -0.21
TRIM59-207ENST00000496222 PTGDRQ13258 359 aa13.75□□□□□ -0.21
TRIM59-207ENST00000496222 GNL2Q13823 731 aaKnown RBP13.75□□□□□ -0.21
TRIM59-207ENST00000496222 BTG3Q14201 252 aaPredicted RBP13.75□□□□□ -0.21
TRIM59-207ENST00000496222 ECM1Q16610 540 aa13.75□□□□□ -0.21
TRIM59-207ENST00000496222 ZNF598Q86UK7 904 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms