RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 SPTLC1O15269 473 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 RPS6KA5O75582 802 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 CXCL14O95715 111 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 NT5C2P49902 561 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 EXOSC10Q01780 885 aaKnown RBP11.73□□□□□ -0.53
C9orf78-207ENST00000495934 BMS1Q14692 1282 aaKnown RBP11.73□□□□□ -0.53
C9orf78-207ENST00000495934 CCDC178Q5BJE1 867 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 POTEGQ6S5H5 508 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 FAM43BQ6ZT52 329 aaPredicted RBP11.73□□□□□ -0.53
C9orf78-207ENST00000495934 GPR149Q86SP6 731 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 CABP7Q86V35 215 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 IQCA1Q86XH1 822 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 LRRC43Q8N309 656 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 STAG2Q8N3U4 1231 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 GIMAP8Q8ND71 665 aaPredicted RBP11.73□□□□□ -0.53
C9orf78-207ENST00000495934 TRAPPC12Q8WVT3 735 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 RSAD2Q8WXG1 361 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 SECISBP2LQ93073 1101 aaKnown RBP11.73□□□□□ -0.53
C9orf78-207ENST00000495934 MTMR8Q96EF0 704 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 CASD1Q96PB1 797 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 USP18Q9UMW8 372 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 GINS2Q9Y248 185 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 NOC2LQ9Y3T9 749 aaKnown RBP11.73□□□□□ -0.53
C9orf78-207ENST00000495934 PCDHA2Q9Y5H9 948 aa11.73□□□□□ -0.53
C9orf78-207ENST00000495934 SPDYE4A6NLX3 237 aa11.72□□□□□ -0.53
C9orf78-207ENST00000495934 DMWDQ09019 674 aa11.72□□□□□ -0.53
C9orf78-207ENST00000495934 NONOQ15233 471 aaKnown RBP eCLIP11.72□□□□□ -0.53
C9orf78-207ENST00000495934 PPM1JQ5JR12 505 aa11.72□□□□□ -0.53
C9orf78-207ENST00000495934 PHLDB3Q6NSJ2 640 aa11.72□□□□□ -0.53
C9orf78-207ENST00000495934 HOMER1Q86YM7 354 aa11.72□□□□□ -0.53
C9orf78-207ENST00000495934 MAML2Q8IZL2 1156 aaPredicted RBP11.72□□□□□ -0.53
C9orf78-207ENST00000495934 SLC39A11Q8N1S5 342 aa11.72□□□□□ -0.53
C9orf78-207ENST00000495934 NCOA7Q8NI08 942 aa11.72□□□□□ -0.53
C9orf78-207ENST00000495934 AUTS2Q8WXX7 1259 aa11.72□□□□□ -0.53
C9orf78-207ENST00000495934 ELAC1Q9H777 363 aaKnown RBP11.72□□□□□ -0.53
C9orf78-207ENST00000495934 SFXN1Q9H9B4 322 aa11.72□□□□□ -0.53
C9orf78-207ENST00000495934 ST3GAL5Q9UNP4 418 aa11.72□□□□□ -0.53
C9orf78-207ENST00000495934 ASPMQ8IZT6 3477 aa11.72□□□□□ -0.53
C9orf78-207ENST00000495934 PATJQ8NI35 1801 aa11.72□□□□□ -0.53
C9orf78-207ENST00000495934 SMIM35A0A1B0GVV1 85 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 KLRF2D3W0D1 207 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 HOXA2O43364 376 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 ATP9AO75110 1047 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 SRFP11831 508 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 HOXB3P14651 431 aaPredicted RBP11.71□□□□□ -0.53
C9orf78-207ENST00000495934 CPA1P15085 419 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 KCNA2P16389 499 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 FAM189BP81408 668 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 TRAF1Q13077 416 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 LETM2Q2VYF4 491 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 ZNF528Q3MIS6 628 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 ODR4Q5SWX8 454 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 RNF20Q5VTR2 975 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 PCNX4Q63HM2 1172 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 NLRX1Q86UT6 975 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 ABI1Q8IZP0 508 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 VPS52Q8N1B4 723 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 NME8Q8N427 588 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 SLC22A17Q8WUG5 538 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 TMEM40Q8WWA1 233 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 BORCS6Q96GS4 357 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 ZBP1Q9H171 429 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 CDHR5Q9HBB8 845 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 ARHGEF3Q9NR81 526 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 SH2B1Q9NRF2 756 aaPredicted RBP11.71□□□□□ -0.53
C9orf78-207ENST00000495934 RNF19AQ9NV58 838 aa11.71□□□□□ -0.53
C9orf78-207ENST00000495934 SMG5Q9UPR3 1016 aaKnown RBP11.71□□□□□ -0.53
C9orf78-207ENST00000495934 LAMA4Q16363 1823 aa11.71□□□□□ -0.54
C9orf78-207ENST00000495934 SPEGQ15772 3267 aa11.71□□□□□ -0.54
C9orf78-207ENST00000495934 GPR182O15218 404 aa11.7□□□□□ -0.54
C9orf78-207ENST00000495934 PRC1O43663 620 aa11.7□□□□□ -0.54
C9orf78-207ENST00000495934 N4BP1O75113 896 aaKnown RBP11.7□□□□□ -0.54
C9orf78-207ENST00000495934 GLULP15104 373 aa11.7□□□□□ -0.54
C9orf78-207ENST00000495934 METAP2P50579 478 aaKnown RBP eCLIP11.7□□□□□ -0.54
C9orf78-207ENST00000495934 TRDNQ13061 729 aa11.7□□□□□ -0.54
C9orf78-207ENST00000495934 PLCB4Q15147 1175 aa11.7□□□□□ -0.54
C9orf78-207ENST00000495934 RALYLQ86SE5 291 aaKnown RBP11.7□□□□□ -0.54
C9orf78-207ENST00000495934 SLC44A3Q8N4M1 653 aa11.7□□□□□ -0.54
C9orf78-207ENST00000495934 PJA1Q8NG27 643 aa11.7□□□□□ -0.54
C9orf78-207ENST00000495934 GPR152Q8TDT2 470 aa11.7□□□□□ -0.54
C9orf78-207ENST00000495934 ATRIPQ8WXE1 791 aa11.7□□□□□ -0.54
C9orf78-207ENST00000495934 TCEANC2Q96MN5 208 aa11.7□□□□□ -0.54
C9orf78-207ENST00000495934 PCYT2Q99447 389 aa11.7□□□□□ -0.54
C9orf78-207ENST00000495934 FOXQ1Q9C009 403 aa11.7□□□□□ -0.54
C9orf78-207ENST00000495934 PCDHGA2Q9Y5H1 932 aa11.7□□□□□ -0.54
C9orf78-207ENST00000495934 NT5C1B-RDH14C9J2C7 533 aa11.69□□□□□ -0.54
C9orf78-207ENST00000495934 SH2B2O14492 632 aaPredicted RBP11.69□□□□□ -0.54
C9orf78-207ENST00000495934 IFIT3O14879 490 aaKnown RBP11.69□□□□□ -0.54
C9orf78-207ENST00000495934 LRRN2O75325 713 aa11.69□□□□□ -0.54
C9orf78-207ENST00000495934 TGM1P22735 817 aa11.69□□□□□ -0.54
C9orf78-207ENST00000495934 GBP2P32456 591 aaPredicted RBP11.69□□□□□ -0.54
C9orf78-207ENST00000495934 MCM5P33992 734 aa11.69□□□□□ -0.54
C9orf78-207ENST00000495934 SLC35G1Q2M3R5 365 aa11.69□□□□□ -0.54
C9orf78-207ENST00000495934 MTHFD1LQ6UB35 978 aa11.69□□□□□ -0.54
C9orf78-207ENST00000495934 DHX32Q7L7V1 743 aaKnown RBP11.69□□□□□ -0.54
C9orf78-207ENST00000495934 TNPO1Q92973 898 aaKnown RBP11.69□□□□□ -0.54
C9orf78-207ENST00000495934 COL26A1Q96A83 441 aa11.69□□□□□ -0.54
C9orf78-207ENST00000495934 GPRASP2Q96D09 838 aa11.69□□□□□ -0.54
C9orf78-207ENST00000495934 TMEM169Q96HH4 297 aa11.69□□□□□ -0.54
C9orf78-207ENST00000495934 CDHR1Q96JP9 859 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 224.5 ms