RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 CDHR1Q96JP9 859 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 LBHD1Q9BQE6 289 aaPredicted RBP17.92■□□□□ 0.46
CBX4-204ENST00000495122 PDCD2LQ9BRP1 358 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 NOC4LQ9BVI4 516 aaKnown RBP17.92■□□□□ 0.46
CBX4-204ENST00000495122 EDEM3Q9BZQ6 932 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 KATNBL1Q9H079 304 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 UNC45AQ9H3U1 944 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 ABHD16BQ9H3Z7 469 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 AGO4Q9HCK5 861 aaKnown RBP17.92■□□□□ 0.46
CBX4-204ENST00000495122 PXMP2Q9NR77 195 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 KCNH7Q9NS40 1196 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 COL20A1Q9P218 1284 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 DBR1Q9UK59 544 aaKnown RBP17.92■□□□□ 0.46
CBX4-204ENST00000495122 FAM184BQ9ULE4 1060 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 CAPN11Q9UMQ6 739 aa17.92■□□□□ 0.46
CBX4-204ENST00000495122 PDXKO00764 312 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 DYNC1I1O14576 645 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 DUSP11O75319 330 aaKnown RBP17.91■□□□□ 0.46
CBX4-204ENST00000495122 ARP10275 920 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 GUCY2CP25092 1073 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 CASP14P31944 242 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 ADKP55263 362 aaKnown RBP17.91■□□□□ 0.46
CBX4-204ENST00000495122 KRT76Q01546 638 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 CNTN2Q02246 1040 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 TBC1D8BQ0IIM8 1120 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 MTMR1Q13613 665 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 ALCAMQ13740 583 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 NFIL3Q16649 462 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 MUM1L1Q5H9M0 696 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 CYP26C1Q6V0L0 522 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 EPM2AIP1Q7L775 607 aaPredicted RBP17.91■□□□□ 0.46
CBX4-204ENST00000495122 MIER3Q7Z3K6 550 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 NLRX1Q86UT6 975 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 KLHDC9Q8NEP7 349 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 KIF18AQ8NI77 898 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 DYDC2Q96IM9 177 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 RMDN3Q96TC7 470 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 DNAJC7Q99615 494 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 REEP2Q9BRK0 252 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 TSEN34Q9BSV6 310 aaKnown RBP17.91■□□□□ 0.46
CBX4-204ENST00000495122 BHMT2Q9H2M3 363 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 ZSWIM4Q9H7M6 989 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 ABHD10Q9NUJ1 306 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 PRKAG2Q9UGJ0 569 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 TRAF3IP3Q9Y228 551 aa17.91■□□□□ 0.46
CBX4-204ENST00000495122 LUC7L2Q9Y383 392 aaKnown RBP17.91■□□□□ 0.46
CBX4-204ENST00000495122 SOWAHBA6NEL2 793 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 POTEB2H3BUK9 544 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 CALUO43852 315 aaPredicted RBP17.9■□□□□ 0.46
CBX4-204ENST00000495122 DKC1O60832 514 aaKnown RBP eCLIP17.9■□□□□ 0.46
CBX4-204ENST00000495122 CCDC175P0C221 793 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 CST5P28325 142 aaPredicted RBP17.9■□□□□ 0.46
CBX4-204ENST00000495122 ZNF131P52739 623 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 VWA3BQ502W6 1294 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 MIIPQ5JXC2 388 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 ARHGEF16Q5VV41 709 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 CCSAPQ6IQ19 270 aaPredicted RBP17.9■□□□□ 0.46
CBX4-204ENST00000495122 RINT1Q6NUQ1 792 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 C1orf186Q6ZWK4 172 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 ZNF397Q8NF99 534 aaPredicted RBP17.9■□□□□ 0.46
CBX4-204ENST00000495122 OR8K1Q8NGG5 319 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 NSUN6Q8TEA1 469 aaKnown RBP17.9■□□□□ 0.46
CBX4-204ENST00000495122 SCFD1Q8WVM8 642 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 SENP7Q9BQF6 1050 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 UPF3AQ9H1J1 476 aaKnown RBP17.9■□□□□ 0.46
CBX4-204ENST00000495122 KCTD10Q9H3F6 313 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 PRDM5Q9NQX1 630 aaPredicted RBP17.9■□□□□ 0.46
CBX4-204ENST00000495122 PPP2R2CQ9Y2T4 447 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 ASTN1O14525 1302 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 PHLPP2Q6ZVD8 1323 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 TANC1Q9C0D5 1861 aa17.9■□□□□ 0.46
CBX4-204ENST00000495122 MYADML2A6NDP7 307 aa17.89■□□□□ 0.45
CBX4-204ENST00000495122 DHX15O43143 795 aaKnown RBP17.89■□□□□ 0.45
CBX4-204ENST00000495122 MAPTP10636 758 aaKnown RBP17.89■□□□□ 0.45
CBX4-204ENST00000495122 RPL13P26373 211 aaKnown RBP17.89■□□□□ 0.45
CBX4-204ENST00000495122 ACLYP53396 1101 aa17.89■□□□□ 0.45
CBX4-204ENST00000495122 PSMC6P62333 389 aa17.89■□□□□ 0.45
CBX4-204ENST00000495122 MRPS9P82933 396 aaKnown RBP17.89■□□□□ 0.45
CBX4-204ENST00000495122 CDK17Q00537 523 aa17.89■□□□□ 0.45
CBX4-204ENST00000495122 CYP4A11Q02928 519 aa17.89■□□□□ 0.45
CBX4-204ENST00000495122 KNOP1Q1ED39 458 aaKnown RBP17.89■□□□□ 0.45
CBX4-204ENST00000495122 TPH2Q8IWU9 490 aa17.89■□□□□ 0.45
CBX4-204ENST00000495122 SLC17A8Q8NDX2 589 aa17.89■□□□□ 0.45
CBX4-204ENST00000495122 HPS3Q969F9 1004 aa17.89■□□□□ 0.45
CBX4-204ENST00000495122 NDST4Q9H3R1 872 aa17.89■□□□□ 0.45
CBX4-204ENST00000495122 SCN10AQ9Y5Y9 1956 aa17.89■□□□□ 0.45
CBX4-204ENST00000495122 MOXD2PA6NHM9 499 aa17.88■□□□□ 0.45
CBX4-204ENST00000495122 USP27XA6NNY8 438 aa17.88■□□□□ 0.45
CBX4-204ENST00000495122 B4DLN1 442 aa17.88■□□□□ 0.45
CBX4-204ENST00000495122 CETN3O15182 167 aa17.88■□□□□ 0.45
CBX4-204ENST00000495122 SLC16A3O15427 465 aaKnown RBP17.88■□□□□ 0.45
CBX4-204ENST00000495122 FAM13AO94988 1023 aa17.88■□□□□ 0.45
CBX4-204ENST00000495122 KRT9P35527 623 aa17.88■□□□□ 0.45
CBX4-204ENST00000495122 ZBED6P86452 979 aa17.88■□□□□ 0.45
CBX4-204ENST00000495122 TLE2Q04725 743 aa17.88■□□□□ 0.45
CBX4-204ENST00000495122 ZNF746Q6NUN9 644 aaPredicted RBP17.88■□□□□ 0.45
CBX4-204ENST00000495122 NSMFQ6X4W1 530 aa17.88■□□□□ 0.45
CBX4-204ENST00000495122 SLC30A10Q6XR72 485 aa17.88■□□□□ 0.45
CBX4-204ENST00000495122 VSIG10LQ86VR7 867 aa17.88■□□□□ 0.45
CBX4-204ENST00000495122 SFR1Q86XK3 245 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms