RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ALG13Q9NP73 1137 aaKnown RBP11.92□□□□□ -0.5
NELFE-213ENST00000494956 RGS18Q9NS28 235 aa11.92□□□□□ -0.5
NELFE-213ENST00000494956 LRFN2Q9ULH4 789 aa11.92□□□□□ -0.5
NELFE-213ENST00000494956 BRWD1Q9NSI6 2320 aa11.92□□□□□ -0.5
NELFE-213ENST00000494956 A0A087WZ62 844 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 IGKV6-21A0A0C4DH24 114 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 TBKBP1A7MCY6 615 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 GPR182O15218 404 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 CD2BP2O95400 341 aaKnown RBP11.91□□□□□ -0.5
NELFE-213ENST00000494956 STAG3L1P0CL83 205 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 BMP1P13497 986 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 EIF4BP23588 611 aaKnown RBP11.91□□□□□ -0.5
NELFE-213ENST00000494956 DNAJB1P25685 340 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 TMOD1P28289 359 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 GTF2F1P35269 517 aaKnown RBP eCLIP11.91□□□□□ -0.5
NELFE-213ENST00000494956 QARSP47897 775 aaKnown RBP11.91□□□□□ -0.5
NELFE-213ENST00000494956 TCEAL5Q5H9L2 206 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 NLRP7Q8WX94 980 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 CLP1Q92989 425 aaKnown RBP11.91□□□□□ -0.5
NELFE-213ENST00000494956 HLA-CQ95604 372 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 SAMD11Q96NU1 681 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 FDXACB1Q9BRP7 624 aaPredicted RBP11.91□□□□□ -0.5
NELFE-213ENST00000494956 LXNQ9BS40 222 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 RNF19AQ9NV58 838 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 LMCD1Q9NZU5 365 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 PCDHB7Q9Y5E2 793 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 PCDHGC5Q9Y5F6 944 aa11.91□□□□□ -0.5
NELFE-213ENST00000494956 C5orf67F2Z3F1 127 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 TBX3O15119 743 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 MAFO75444 373 aaPredicted RBP11.9□□□□□ -0.5
NELFE-213ENST00000494956 ITGB1P05556 798 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 P4HBP07237 508 aaKnown RBP11.9□□□□□ -0.5
NELFE-213ENST00000494956 DARSP14868 501 aaKnown RBP11.9□□□□□ -0.5
NELFE-213ENST00000494956 MCM7P33993 719 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 TXKP42681 527 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 CAMK1Q14012 370 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 TRIM29Q14134 588 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 NBR1Q14596 966 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 EPHA7Q15375 998 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 CALCRLQ16602 461 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 LONRF3Q496Y0 759 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 SLC24A5Q71RS6 500 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 RHPN2Q8IUC4 686 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 TPH2Q8IWU9 490 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 CMTR2Q8IYT2 770 aaKnown RBP11.9□□□□□ -0.5
NELFE-213ENST00000494956 TMEM143Q96AN5 459 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 C8orf76Q96K31 380 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 CEP170P1Q96L14 293 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 CYP26B1Q9NR63 512 aa11.9□□□□□ -0.5
NELFE-213ENST00000494956 SUCLA2Q9P2R7 463 aaPredicted RBP11.9□□□□□ -0.5
NELFE-213ENST00000494956 POTEMA6NI47 508 aa11.89□□□□□ -0.51
NELFE-213ENST00000494956 EIF5BO60841 1220 aaKnown RBP11.89□□□□□ -0.51
NELFE-213ENST00000494956 KCNA5P22460 613 aa11.89□□□□□ -0.51
NELFE-213ENST00000494956 IRS1P35568 1242 aa11.89□□□□□ -0.51
NELFE-213ENST00000494956 RBM25P49756 843 aaKnown RBP11.89□□□□□ -0.51
NELFE-213ENST00000494956 ZNF174Q15697 407 aa11.89□□□□□ -0.51
NELFE-213ENST00000494956 EP400NLQ6ZTU2 488 aa11.89□□□□□ -0.51
NELFE-213ENST00000494956 ECHDC2Q86YB7 292 aa11.89□□□□□ -0.51
NELFE-213ENST00000494956 KLHL23Q8NBE8 558 aa11.89□□□□□ -0.51
NELFE-213ENST00000494956 RNF169Q8NCN4 708 aa11.89□□□□□ -0.51
NELFE-213ENST00000494956 SYMPKQ92797 1274 aaKnown RBP11.89□□□□□ -0.51
NELFE-213ENST00000494956 NLRP4Q96MN2 994 aa11.89□□□□□ -0.51
NELFE-213ENST00000494956 UHRF1Q96T88 793 aaPredicted RBP11.89□□□□□ -0.51
NELFE-213ENST00000494956 EIF2AK1Q9BQI3 630 aaKnown RBP11.89□□□□□ -0.51
NELFE-213ENST00000494956 UBE2ZQ9H832 354 aaPredicted RBP11.89□□□□□ -0.51
NELFE-213ENST00000494956 TTC12Q9H892 705 aaPredicted RBP11.89□□□□□ -0.51
NELFE-213ENST00000494956 C1orf112Q9NSG2 853 aa11.89□□□□□ -0.51
NELFE-213ENST00000494956 PLAGL2Q9UPG8 496 aa11.89□□□□□ -0.51
NELFE-213ENST00000494956 CUL9Q8IWT3 2517 aa11.89□□□□□ -0.51
NELFE-213ENST00000494956 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.88□□□□□ -0.51
NELFE-213ENST00000494956 H3BQ06 376 aaPredicted RBP11.88□□□□□ -0.51
NELFE-213ENST00000494956 NEMFO60524 1076 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 SLITRK3O94933 977 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 BAG4O95429 457 aaKnown RBP11.88□□□□□ -0.51
NELFE-213ENST00000494956 YWHABP31946 246 aaKnown RBP11.88□□□□□ -0.51
NELFE-213ENST00000494956 PBX3P40426 434 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 FAM189BP81408 668 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 PTPROQ16827 1216 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 XKR9Q5GH70 373 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 ODR4Q5SWX8 454 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 SPOUT1Q5T280 376 aaKnown RBP11.88□□□□□ -0.51
NELFE-213ENST00000494956 LRRC55Q6ZSA7 311 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 ADGRD2Q7Z7M1 963 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 C4orf19Q8IY42 314 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 SLFN12Q8IYM2 578 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 IL27Q8NEV9 243 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 SPPL3Q8TCT6 385 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 ZSCAN31Q96LW9 406 aaPredicted RBP11.88□□□□□ -0.51
NELFE-213ENST00000494956 MTMR9Q96QG7 549 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 NAP1L4Q99733 375 aaKnown RBP11.88□□□□□ -0.51
NELFE-213ENST00000494956 C11orf84Q9BUA3 381 aaPredicted RBP11.88□□□□□ -0.51
NELFE-213ENST00000494956 GCOM2Q9BZD3 368 aaPredicted RBP11.88□□□□□ -0.51
NELFE-213ENST00000494956 CWH43Q9H720 699 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 MINDY3Q9H8M7 445 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 ATP6V0A4Q9HBG4 840 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 XPNPEP1Q9NQW7 623 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 TYW1Q9NV66 732 aaKnown RBP11.88□□□□□ -0.51
NELFE-213ENST00000494956 TMEM161AQ9NX61 479 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 PCDHA12Q9UN75 941 aa11.88□□□□□ -0.51
NELFE-213ENST00000494956 COG5Q9UP83 839 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms