RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 POLD4Q9HCU8 107 aa12.17□□□□□ -0.46
PKP4-215ENST00000494945 TRPC6Q9Y210 931 aa12.17□□□□□ -0.46
PKP4-215ENST00000494945 ZBTB42B2RXF5 422 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 H0YCG3 227 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 H3BRB1 525 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 KPNA6O60684 536 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 PPP1R37O75864 691 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 ZNF286BP0CG31 522 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 CDK11BP21127 795 aaKnown RBP12.16□□□□□ -0.46
PKP4-215ENST00000494945 NMT1P30419 496 aaKnown RBP12.16□□□□□ -0.46
PKP4-215ENST00000494945 SMTNP53814 917 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 PMS1P54277 932 aaKnown RBP12.16□□□□□ -0.46
PKP4-215ENST00000494945 NKX3-2P78367 333 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 CACNB2Q08289 660 aaPredicted RBP12.16□□□□□ -0.46
PKP4-215ENST00000494945 CCDC173Q0VFZ6 552 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 DMP1Q13316 513 aaPredicted RBP12.16□□□□□ -0.46
PKP4-215ENST00000494945 PPP2R5AQ15172 486 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 KNOP1Q1ED39 458 aaKnown RBP12.16□□□□□ -0.46
PKP4-215ENST00000494945 ZCWPW2Q504Y3 356 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 FAM114A1Q8IWE2 563 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 CSGALNACT2Q8N6G5 542 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 RAET1EQ8TD07 263 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 TCP11Q8WWU5 503 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 IFT74Q96LB3 600 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 DUSP9Q99956 384 aaKnown RBP12.16□□□□□ -0.46
PKP4-215ENST00000494945 NTPCRQ9BSD7 190 aaKnown RBP12.16□□□□□ -0.46
PKP4-215ENST00000494945 STRA6Q9BX79 667 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 POLR3FQ9H1D9 316 aaPredicted RBP12.16□□□□□ -0.46
PKP4-215ENST00000494945 UPF3AQ9H1J1 476 aaKnown RBP12.16□□□□□ -0.46
PKP4-215ENST00000494945 KCTD10Q9H3F6 313 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 RNPEPQ9H4A4 650 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 TUT1Q9H6E5 874 aaKnown RBP12.16□□□□□ -0.46
PKP4-215ENST00000494945 GPRC5CQ9NQ84 441 aa12.16□□□□□ -0.46
PKP4-215ENST00000494945 SAMSN1Q9NSI8 373 aaKnown RBP12.16□□□□□ -0.46
PKP4-215ENST00000494945 IGKV6-21A0A0C4DH24 114 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 K7ENM7 598 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 PDXKO00764 312 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 MAGEB2O15479 319 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 AP5Z1O43299 807 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 CALUO43852 315 aaPredicted RBP12.15□□□□□ -0.46
PKP4-215ENST00000494945 PRPF6O94906 941 aaKnown RBP12.15□□□□□ -0.46
PKP4-215ENST00000494945 ADCY5O95622 1261 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 F2P00734 622 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 PRKAR2AP13861 404 aaKnown RBP12.15□□□□□ -0.46
PKP4-215ENST00000494945 ELNP15502 786 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 ARL2P36404 184 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 PEX3P56589 373 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 GJA9P57773 515 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 C1QTNF8P60827 252 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 GTF2BQ00403 316 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 FANCCQ00597 558 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 FSCN1Q16658 493 aaKnown RBP12.15□□□□□ -0.46
PKP4-215ENST00000494945 EDRF1Q3B7T1 1238 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 MAP3K21Q5TCX8 1036 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 IER5Q5VY09 327 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 NELFCDQ8IXH7 590 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 SLAIN1Q8ND83 568 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 ANKRD20A12PQ8NF67 263 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 KCNN1Q92952 543 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 PDLIM2Q96JY6 352 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 CTAGE1Q96RT6 745 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 PPP1R9BQ96SB3 815 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 KATNAL1Q9BW62 490 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 SRRTQ9BXP5 876 aaKnown RBP12.15□□□□□ -0.46
PKP4-215ENST00000494945 TRIM5Q9C035 493 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 TMEM206Q9H813 350 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 SPC25Q9HBM1 224 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 KMT5AQ9NQR1 393 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 TYW1Q9NV66 732 aaKnown RBP12.15□□□□□ -0.46
PKP4-215ENST00000494945 TRAF3IP3Q9Y228 551 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 TRIP11Q15643 1979 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 ZMYM2Q9UBW7 1377 aa12.15□□□□□ -0.46
PKP4-215ENST00000494945 PDCD11Q14690 1871 aaKnown RBP12.14□□□□□ -0.47
PKP4-215ENST00000494945 CCDC169A6NNP5 214 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 CBFA2T2O43439 604 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 SERPINC1P01008 464 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 RARBP10826 455 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 ATP1A3P13637 1013 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 INSRRP14616 1297 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 EEF1GP26641 437 aaKnown RBP12.14□□□□□ -0.47
PKP4-215ENST00000494945 CNGA1P29973 690 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 HOXD13P35453 343 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 NAMPTP43490 491 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 NPTX2P47972 431 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 ZNF75DP51815 510 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 FKBP3Q00688 224 aaKnown RBP12.14□□□□□ -0.47
PKP4-215ENST00000494945 TRIM32Q13049 653 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 NFIL3Q16649 462 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 HAUS6Q7Z4H7 955 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.14□□□□□ -0.47
PKP4-215ENST00000494945 ZC3H3Q8IXZ2 948 aaKnown RBP12.14□□□□□ -0.47
PKP4-215ENST00000494945 RETREG2Q8NC44 543 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 GOLGA5Q8TBA6 731 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 BSNDQ8WZ55 320 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 TMEM143Q96AN5 459 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 LENG1Q96BZ8 264 aaPredicted RBP12.14□□□□□ -0.47
PKP4-215ENST00000494945 MRFAP1L1Q96HT8 127 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 CEP63Q96MT8 703 aa12.14□□□□□ -0.47
PKP4-215ENST00000494945 ACCSQ96QU6 501 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms