RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 TEX2Q8IWB9 1127 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 CCDC148Q8NFR7 591 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 VN1R2Q8NFZ6 395 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 BICD2Q8TD16 824 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 HELQQ8TDG4 1101 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 MRPS27Q92552 414 aaKnown RBP10.88□□□□□ -0.67
UBR4-216ENST00000494503 TMEM117Q9H0C3 514 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 NRBP2Q9NSY0 501 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 SEPT9Q9UHD8 586 aaPredicted RBP10.88□□□□□ -0.67
UBR4-216ENST00000494503 MAFBQ9Y5Q3 323 aaPredicted RBP10.88□□□□□ -0.67
UBR4-216ENST00000494503 MYO10Q9HD67 2058 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 HIDE1A8MVS5 230 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 ADAMTS3O15072 1205 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 ZC3H11AO75152 810 aaKnown RBP eCLIP10.87□□□□□ -0.67
UBR4-216ENST00000494503 CSDE1O75534 798 aaKnown RBP10.87□□□□□ -0.67
UBR4-216ENST00000494503 CYP3A4P08684 503 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 PTPN5P54829 565 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 MTERF2Q49AM1 385 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 IER5LQ5T953 404 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 LRCH2Q5VUJ6 765 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 CES5AQ6NT32 575 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 ANKRD54Q6NXT1 300 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 FBXL6Q8N531 539 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 CCDC136Q96JN2 1154 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 TEKT3Q9BXF9 490 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 ZMYND12Q9H0C1 365 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 CWH43Q9H720 699 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 ELAC1Q9H777 363 aaKnown RBP10.87□□□□□ -0.67
UBR4-216ENST00000494503 DISC1Q9NRI5 854 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 FAM217BQ9NTX9 383 aaPredicted RBP10.87□□□□□ -0.67
UBR4-216ENST00000494503 FAM86C1Q9NVL1 165 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 SPG21Q9NZD8 308 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 VPS54Q9P1Q0 977 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 INPP5FQ9Y2H2 1132 aa10.87□□□□□ -0.67
UBR4-216ENST00000494503 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.86□□□□□ -0.67
UBR4-216ENST00000494503 ESYT2A0FGR8 921 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 NT5C1B-RDH14C9J2C7 533 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 FSCN2O14926 492 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 ATF7P17544 494 aaPredicted RBP10.86□□□□□ -0.67
UBR4-216ENST00000494503 EIF4BP23588 611 aaKnown RBP10.86□□□□□ -0.67
UBR4-216ENST00000494503 ALDH7A1P49419 539 aaKnown RBP10.86□□□□□ -0.67
UBR4-216ENST00000494503 RCAN1P53805 252 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 NLRP5P59047 1200 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 CCT2P78371 535 aaKnown RBP10.86□□□□□ -0.67
UBR4-216ENST00000494503 RNASELQ05823 741 aaKnown RBP10.86□□□□□ -0.67
UBR4-216ENST00000494503 SIGLEC14Q08ET2 396 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 SMC1AQ14683 1233 aaKnown RBP10.86□□□□□ -0.67
UBR4-216ENST00000494503 TPRNQ4KMQ1 711 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 TWF2Q6IBS0 349 aaKnown RBP10.86□□□□□ -0.67
UBR4-216ENST00000494503 LRRC55Q6ZSA7 311 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 ECHDC2Q86YB7 292 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 PRSS33Q8NF86 280 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 CASP10Q92851 521 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 GJA10Q969M2 543 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 TMEM169Q96HH4 297 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 CASD1Q96PB1 797 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 PHOX2BQ99453 314 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 SH2D3AQ9BRG2 576 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 GBP3Q9H0R5 595 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 NGRNQ9NPE2 291 aaKnown RBP10.86□□□□□ -0.67
UBR4-216ENST00000494503 DACT1Q9NYF0 836 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 CDH22Q9UJ99 828 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 LZTS1Q9Y250 596 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 NR2E1Q9Y466 385 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 KMT2EQ8IZD2 1858 aa10.86□□□□□ -0.67
UBR4-216ENST00000494503 MSH4O15457 936 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 PRPF3O43395 683 aaKnown RBP10.85□□□□□ -0.67
UBR4-216ENST00000494503 WEE2P0C1S8 567 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 DARSP14868 501 aaKnown RBP10.85□□□□□ -0.67
UBR4-216ENST00000494503 DNM2P50570 870 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 GPC3P51654 580 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 JAK3P52333 1124 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 PLCB3Q01970 1234 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 DSC3Q14574 896 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 PKN1Q16512 942 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 UGCGQ16739 394 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 PTPN21Q16825 1174 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 CLLU1OSQ5K130 101 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 RARS2Q5T160 578 aaKnown RBP10.85□□□□□ -0.67
UBR4-216ENST00000494503 MIER3Q7Z3K6 550 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 TRIM22Q8IYM9 498 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 ATOH1Q92858 354 aaPredicted RBP10.85□□□□□ -0.67
UBR4-216ENST00000494503 NLRP4Q96MN2 994 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 PRRX2Q99811 253 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 MRPL9Q9BYD2 267 aaKnown RBP10.85□□□□□ -0.67
UBR4-216ENST00000494503 GCOM2Q9BZD3 368 aaPredicted RBP10.85□□□□□ -0.67
UBR4-216ENST00000494503 SLKQ9H2G2 1235 aaPredicted RBP10.85□□□□□ -0.67
UBR4-216ENST00000494503 ADAMTS10Q9H324 1103 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 UNC45AQ9H3U1 944 aa10.85□□□□□ -0.67
UBR4-216ENST00000494503 NCOA5Q9HCD5 579 aaKnown RBP10.85□□□□□ -0.67
UBR4-216ENST00000494503 PIN4Q9Y237 131 aaKnown RBP10.85□□□□□ -0.67
UBR4-216ENST00000494503 TMEM150BA6NC51 233 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 DDX11L8A8MPP1 907 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 CPLX1O14810 134 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 ZNF862O60290 1169 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 CXCL14O95715 111 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 HOXB8P17481 243 aaPredicted RBP10.84□□□□□ -0.67
UBR4-216ENST00000494503 SFPQP23246 707 aaKnown RBP eCLIP10.84□□□□□ -0.67
UBR4-216ENST00000494503 SFNP31947 248 aa10.84□□□□□ -0.67
UBR4-216ENST00000494503 VCPP55072 806 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms