RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 MKNK1Q9BUB5 465 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 ANO3Q9BYT9 981 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 EHMT1Q9H9B1 1298 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 CERS4Q9HA82 394 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 SLC28A3Q9HAS3 691 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 ETNK1Q9HBU6 452 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 XPNPEP3Q9NQH7 507 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 SEPT3Q9UH03 358 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 ZHX1Q9UKY1 873 aaPredicted RBP7.66□□□□□ -1.18
VPS52-219ENST00000493379 ELP1O95163 1332 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 SYNRGQ9UMZ2 1314 aa7.66□□□□□ -1.18
VPS52-219ENST00000493379 H0Y858 1186 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 DHX15O43143 795 aaKnown RBP7.65□□□□□ -1.18
VPS52-219ENST00000493379 DYNC1LI2O43237 492 aaPredicted RBP7.65□□□□□ -1.18
VPS52-219ENST00000493379 ICMTO60725 284 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 ATP9AO75110 1047 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 CABYRO75952 493 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 NFASCO94856 1347 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 PGK1P00558 417 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 MMP1P03956 469 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 KCNA2P16389 499 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 U2AF2P26368 475 aaKnown RBP eCLIP7.65□□□□□ -1.183e-10■■■□□ 16.6
VPS52-219ENST00000493379 SLC19A1P41440 591 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 RABGGTBP53611 331 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 EPHA4P54764 986 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 NLRP5P59047 1200 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 ZNF211Q13398 564 aaPredicted RBP7.65□□□□□ -1.18
VPS52-219ENST00000493379 NEDD9Q14511 834 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 KCNA10Q16322 511 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 LY6KQ17RY6 165 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 GNPTABQ3T906 1256 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 Q4G0T1 1027 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 PPP4R3AQ6IN85 833 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 B3GNT9Q6UX72 402 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 C16orf59Q7L2K0 433 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 EEPD1Q7L9B9 569 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 CYP2U1Q7Z449 544 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 TLK2Q86UE8 772 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 NLRX1Q86UT6 975 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 CCDC83Q8IWF9 413 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 GIMAP8Q8ND71 665 aaPredicted RBP7.65□□□□□ -1.18
VPS52-219ENST00000493379 PPTC7Q8NI37 304 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 LENG9Q96B70 501 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 TOX2Q96NM4 488 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 SPC25Q9HBM1 224 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 TLR9Q9NR96 1032 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 TMEM260Q9NX78 707 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 MSRAQ9UJ68 235 aa7.65□□□□□ -1.18
VPS52-219ENST00000493379 IGKV6D-21A0A0A0MT36 114 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 MYADML2A6NDP7 307 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 FAM86B1E9PN63 330 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 H3BRB1 525 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 HAS3O00219 553 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 PPFIA3O75145 1194 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 GH1P01241 217 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 ASGR1P07306 291 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 FAM86B2P0C5J1 330 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 MYCLP12524 364 aaPredicted RBP7.64□□□□□ -1.19
VPS52-219ENST00000493379 RAG1P15918 1043 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 CPT1AP50416 773 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 ACLYP53396 1101 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 MARSP56192 900 aaKnown RBP7.64□□□□□ -1.19
VPS52-219ENST00000493379 PURAQ00577 322 aaKnown RBP7.64□□□□□ -1.19
VPS52-219ENST00000493379 TLE2Q04725 743 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 FSCN1Q16658 493 aaKnown RBP7.64□□□□□ -1.19
VPS52-219ENST00000493379 GNASQ5JWF2 1037 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 JAKMIP3Q5VZ66 844 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 METTL7BQ6UX53 244 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 SEPT14Q6ZU15 432 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 ANKRD33Q7Z3H0 272 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 KRT25Q7Z3Z0 450 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 SESTD1Q86VW0 696 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 CYP2W1Q8TAV3 490 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 COPS5Q92905 334 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 FERMT2Q96AC1 680 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 FOXP1Q9H334 677 aaPredicted RBP7.64□□□□□ -1.19
VPS52-219ENST00000493379 TUT1Q9H6E5 874 aaKnown RBP7.64□□□□□ -1.19
VPS52-219ENST00000493379 KCNH7Q9NS40 1196 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 GJB4Q9NTQ9 266 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 RTEL1Q9NZ71 1219 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 SERTAD1Q9UHV2 236 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 KCNJ14Q9UNX9 436 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 DNMT3AQ9Y6K1 912 aaPredicted RBP7.64□□□□□ -1.19
VPS52-219ENST00000493379 MYH6P13533 1939 aa7.64□□□□□ -1.19
VPS52-219ENST00000493379 GRIN2DO15399 1336 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 A0A1W2PQ45 241 aaPredicted RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 A0A1W2PQY0 241 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 BTBD18B2RXH4 712 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 KBTBD13C9JR72 458 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 PROB1E7EW31 1015 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 K7ELQ4 463 aaPredicted RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 TBX3O15119 743 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 ZEB2O60315 1214 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 ARP10275 920 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 ACRP10323 421 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 GCFC2P16383 781 aaKnown RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 UBA1P22314 1058 aaKnown RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 HOXC8P31273 242 aa7.63□□□□□ -1.19
VPS52-219ENST00000493379 PTPN11Q06124 597 aaPredicted RBP7.63□□□□□ -1.19
VPS52-219ENST00000493379 MTMR1Q13613 665 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms