RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 TRIM32Q13049 653 aa15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 HSP90AA2PQ14568 343 aaPredicted RBP15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 BRDTQ58F21 947 aaPredicted RBP15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 TTI2Q6NXR4 508 aa15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 SARM1Q6SZW1 724 aa15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 EPM2AIP1Q7L775 607 aaPredicted RBP15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 EXOC8Q8IYI6 725 aa15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 LENG1Q96BZ8 264 aaPredicted RBP15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 CEP89Q96ST8 783 aa15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 C16orf70Q9BSU1 422 aa15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 AP5M1Q9H0R1 490 aa15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 C17orf75Q9HAS0 396 aa15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 SPTLC3Q9NUV7 552 aa15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 KAT6AQ92794 2004 aa15.54■□□□□ 0.08
PDZRN3-210ENST00000492909 UQCRHLA0A096LP55 91 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 H3BRB1 525 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 EIF3DO15371 548 aaKnown RBP eCLIP15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 DUSP11O75319 330 aaKnown RBP15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 UQCRHP07919 91 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 MYBP10242 640 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 MAPTP10636 758 aaKnown RBP15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 NMT1P30419 496 aaKnown RBP15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 CPT1AP50416 773 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 PRMT2P55345 433 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 LRRC63Q05C16 580 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 TBC1D8BQ0IIM8 1120 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 PKN2Q16513 984 aaKnown RBP15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 ANKRD40Q6AI12 368 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 ZNF720Q7Z2F6 126 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 FIZ1Q96SL8 496 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 TRIM5Q9C035 493 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 SEMA6BQ9H3T3 888 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 RNPEPQ9H4A4 650 aa15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 TUT1Q9H6E5 874 aaKnown RBP15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 SAMSN1Q9NSI8 373 aaKnown RBP15.53■□□□□ 0.08
PDZRN3-210ENST00000492909 SEPT4O43236 478 aa15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 MAFO75444 373 aaPredicted RBP15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 ZNF18P17022 549 aa15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 CDK11BP21127 795 aaKnown RBP15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 CNGA1P29973 690 aa15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 RTP1P59025 263 aa15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 CACNB2Q08289 660 aaPredicted RBP15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 DMP1Q13316 513 aaPredicted RBP15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 BMT2Q1RMZ1 405 aa15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 HSP90AA4PQ58FG1 418 aa15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 FOXR2Q6PJQ5 311 aa15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 NELFCDQ8IXH7 590 aa15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 CSGALNACT2Q8N6G5 542 aa15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 SLC17A8Q8NDX2 589 aa15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 ZNF507Q8TCN5 953 aa15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 TSG101Q99816 390 aa15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 PCDHB13Q9Y5F0 798 aa15.52■□□□□ 0.08
PDZRN3-210ENST00000492909 UBE4BO95155 1302 aa15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 ZBTB42B2RXF5 422 aa15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 K7ENM7 598 aa15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 PRPF6O94906 941 aaKnown RBP15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 HMGCRP04035 888 aa15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 ATP1A3P13637 1013 aa15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 GRK4P32298 578 aa15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 SMTNP53814 917 aa15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 PEX3P56589 373 aa15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 ALCAMQ13740 583 aa15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 KNOP1Q1ED39 458 aaKnown RBP15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 SLC9C1Q4G0N8 1177 aa15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 CDKAL1Q5VV42 579 aa15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 PXYLP1Q8TE99 480 aa15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 NOC3LQ8WTT2 800 aaKnown RBP15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 DUSP9Q99956 384 aaKnown RBP15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 JPH2Q9BR39 696 aaPredicted RBP15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 POLR3FQ9H1D9 316 aaPredicted RBP15.52■□□□□ 0.07
PDZRN3-210ENST00000492909 GAS2O43903 313 aaKnown RBP15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 PRKAR2AP13861 404 aaKnown RBP15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 SOX10P56693 466 aa15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 ZCWPW2Q504Y3 356 aa15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 ZC2HC1CQ53FD0 456 aaPredicted RBP15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 ZNF484Q5JVG2 852 aa15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 PPP4R3CPQ6ZMV5 832 aa15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 EVPLQ92817 2033 aa15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 TMEM143Q96AN5 459 aa15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 IFT74Q96LB3 600 aa15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 KCTD10Q9H3F6 313 aa15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 KCNF1Q9H3M0 494 aa15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 ST6GALNAC4Q9H4F1 302 aa15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 KCNG1Q9UIX4 513 aa15.51■□□□□ 0.07
PDZRN3-210ENST00000492909 DYNC1I1O14576 645 aa15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 PPP1R37O75864 691 aa15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 SERPINC1P01008 464 aa15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 INSRRP14616 1297 aa15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 NPTX2P47972 431 aa15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 NCKAP1LP55160 1127 aa15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 FANCCQ00597 558 aa15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 FSCN1Q16658 493 aaKnown RBP15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 HAUS6Q7Z4H7 955 aa15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 KIAA1524Q8TCG1 905 aa15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 SPIRE2Q8WWL2 714 aa15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 NTPCRQ9BSD7 190 aaKnown RBP15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 STRA6Q9BX79 667 aa15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 SRRTQ9BXP5 876 aaKnown RBP15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 THAP9Q9H5L6 903 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms