RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 PLPPR4Q7Z2D5 763 aa8.87□□□□□ -0.99
FDPS-218ENST00000492887 FAM114A1Q8IWE2 563 aa8.87□□□□□ -0.99
FDPS-218ENST00000492887 ADSSL1Q8N142 457 aa8.87□□□□□ -0.99
FDPS-218ENST00000492887 DEPTORQ8TB45 409 aa8.87□□□□□ -0.99
FDPS-218ENST00000492887 ENOX1Q8TC92 643 aaKnown RBP8.87□□□□□ -0.99
FDPS-218ENST00000492887 ATP8B4Q8TF62 1192 aa8.87□□□□□ -0.99
FDPS-218ENST00000492887 BICD1Q96G01 975 aa8.87□□□□□ -0.99
FDPS-218ENST00000492887 SCLT1Q96NL6 688 aa8.87□□□□□ -0.99
FDPS-218ENST00000492887 PCYT2Q99447 389 aa8.87□□□□□ -0.99
FDPS-218ENST00000492887 JPH2Q9BR39 696 aaPredicted RBP8.87□□□□□ -0.99
FDPS-218ENST00000492887 KATNAL1Q9BW62 490 aa8.87□□□□□ -0.99
FDPS-218ENST00000492887 CFHR5Q9BXR6 569 aa8.87□□□□□ -0.99
FDPS-218ENST00000492887 SUGCTQ9HAC7 445 aa8.87□□□□□ -0.99
FDPS-218ENST00000492887 KMT5AQ9NQR1 393 aa8.87□□□□□ -0.99
FDPS-218ENST00000492887 FANCLQ9NW38 375 aa8.87□□□□□ -0.99
FDPS-218ENST00000492887 RALGAPA2Q2PPJ7 1873 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 FRMD3A2A2Y4 597 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 SLC16A4O15374 487 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 ADCY6O43306 1168 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 ADCY5O95622 1261 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 GNRH1P01148 92 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 CYBAP13498 195 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 PLS3P13797 630 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 ATP4AP20648 1035 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 CCND3P30281 292 aaPredicted RBP8.86□□□□□ -0.99
FDPS-218ENST00000492887 MATR3P43243 847 aaKnown RBP eCLIP8.86□□□□□ -0.99
FDPS-218ENST00000492887 MTIF2P46199 727 aaKnown RBP8.86□□□□□ -0.99
FDPS-218ENST00000492887 SOX10P56693 466 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 TRIM32Q13049 653 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 PPFIA1Q13136 1202 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 ALCAMQ13740 583 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 PPP2R5AQ15172 486 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 CCDC40Q4G0X9 1142 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 FILIP1LQ4L180 1135 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 ZNF484Q5JVG2 852 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 EXOC8Q8IYI6 725 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 GUF1Q8N442 669 aaKnown RBP8.86□□□□□ -0.99
FDPS-218ENST00000492887 CSGALNACT2Q8N6G5 542 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 METTL13Q8N6R0 699 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 RETREG2Q8NC44 543 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 SLC17A8Q8NDX2 589 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 GLIS3Q8NEA6 775 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 TRAPPC12Q8WVT3 735 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 TCP11Q8WWU5 503 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 EMID1Q96A84 441 aaPredicted RBP8.86□□□□□ -0.99
FDPS-218ENST00000492887 TMEM143Q96AN5 459 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 FGFBP2Q9BYJ0 223 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 SCUBE2Q9NQ36 999 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 SAMSN1Q9NSI8 373 aaKnown RBP8.86□□□□□ -0.99
FDPS-218ENST00000492887 NRBP1Q9UHY1 535 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 EXOC7Q9UPT5 735 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 PPME1Q9Y570 386 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 PCDHB13Q9Y5F0 798 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 COL1A2P08123 1366 aa8.86□□□□□ -0.99
FDPS-218ENST00000492887 PDCD11Q14690 1871 aaKnown RBP8.85□□□□□ -0.99
FDPS-218ENST00000492887 KCNJ18B7U540 433 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 H0YCG3 227 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 H3BRB1 525 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 EIF3DO15371 548 aaKnown RBP eCLIP8.85□□□□□ -0.99
FDPS-218ENST00000492887 SEPT4O43236 478 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 ATMINO43313 823 aaPredicted RBP8.85□□□□□ -0.99
FDPS-218ENST00000492887 GAS2O43903 313 aaKnown RBP8.85□□□□□ -0.99
FDPS-218ENST00000492887 DUSP11O75319 330 aaKnown RBP8.85□□□□□ -0.99
FDPS-218ENST00000492887 PPFIA4O75335 1185 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 STBD1O95210 358 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 PRKCSHP14314 528 aaPredicted RBP8.85□□□□□ -0.99
FDPS-218ENST00000492887 PSEN2P49810 448 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 MNX1P50219 401 aaPredicted RBP8.85□□□□□ -0.99
FDPS-218ENST00000492887 DNM2P50570 870 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 CASP5P51878 434 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 PRMT2P55345 433 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 UBASH3AP57075 661 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 C1QTNF8P60827 252 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 FANCCQ00597 558 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 LRRC63Q05C16 580 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 SPAG1Q07617 926 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 CACNB2Q08289 660 aaPredicted RBP8.85□□□□□ -0.99
FDPS-218ENST00000492887 STRN3Q13033 797 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 KCNJ12Q14500 433 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 MFSD10Q14728 455 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 NCAPHQ15003 741 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 FSCN1Q16658 493 aaKnown RBP8.85□□□□□ -0.99
FDPS-218ENST00000492887 COBLL1Q53SF7 1204 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 ANKRD40Q6AI12 368 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 HS2ST1Q7LGA3 356 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 ZBTB8OSQ8IWT0 167 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 LRRC71Q8N4P6 559 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 SPC24Q8NBT2 197 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 SLAIN1Q8ND83 568 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 TRPV1Q8NER1 839 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 PSPC1Q8WXF1 523 aaKnown RBP8.85□□□□□ -0.99
FDPS-218ENST00000492887 TRIM44Q96DX7 344 aaPredicted RBP8.85□□□□□ -0.99
FDPS-218ENST00000492887 CNOT6LQ96LI5 555 aaKnown RBP8.85□□□□□ -0.99
FDPS-218ENST00000492887 ACCSQ96QU6 501 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 MAP7D2Q96T17 732 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 PPP1R16BQ96T49 567 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 KIFC3Q9BVG8 833 aa8.85□□□□□ -0.99
FDPS-218ENST00000492887 SRRTQ9BXP5 876 aaKnown RBP8.85□□□□□ -0.99
FDPS-218ENST00000492887 NIFKQ9BYG3 293 aaKnown RBP8.85□□□□□ -0.99
FDPS-218ENST00000492887 TUT1Q9H6E5 874 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms