RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 RNF223E7ERA6 249 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 HBP1O60381 514 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 DDAH1O94760 285 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 CALM1P0DP23 149 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 CALM2P0DP24 149 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 CALM3P0DP25 149 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 ZSCAN20P17040 1043 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 SP100P23497 879 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 CA8P35219 290 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 ACTR2P61160 394 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 PLCB3Q01970 1234 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 PLCB4Q15147 1175 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 SLC35G1Q2M3R5 365 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 FAM102BQ5T8I3 360 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 MTHFD1LQ6UB35 978 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 COLGALT1Q8NBJ5 622 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 NKD2Q969F2 451 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 ZBTB10Q96DT7 871 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 S1PR5Q9H228 398 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 ELAC1Q9H777 363 aaKnown RBP11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 KCNH7Q9NS40 1196 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 TMEM161AQ9NX61 479 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 PCDHA6Q9UN73 950 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 ST3GAL5Q9UNP4 418 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 PCDHA8Q9Y5H6 950 aa11.11□□□□□ -0.63
TNFRSF9-203ENST00000492571 E7EWF7 191 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 ZNF76P36508 570 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 MTHFRP42898 656 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 RBM10P98175 930 aaKnown RBP11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 NUCB1Q02818 461 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 ATAT1Q5SQI0 421 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 SMC5Q8IY18 1101 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 CKAP2LQ8IYA6 745 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 ZNF654Q8IZM8 581 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 TRAPPC12Q8WVT3 735 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 ZNF558Q96NG5 402 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 TMEM117Q9H0C3 514 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 ADAM7Q9H2U9 754 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 TMX1Q9H3N1 280 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 ERVK-5Q9HDB9 667 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 SPG21Q9NZD8 308 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 TCEAL9Q9UHQ7 104 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 NOC2LQ9Y3T9 749 aaKnown RBP11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 CFAP54Q96N23 3096 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 ZDBF2Q9HCK1 2354 aa11.1□□□□□ -0.63
TNFRSF9-203ENST00000492571 NFASCO94856 1347 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 TTC3P53804 2025 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 NLRC5Q86WI3 1866 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 C9IYK1 514 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 FSCN2O14926 492 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 FOSP01100 380 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 CYP21A2P08686 494 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 NBL1P41271 181 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 ID4P47928 161 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 ALDH7A1P49419 539 aaKnown RBP11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 CLCN5P51795 746 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 CRYBB1P53674 252 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 APOBRQ0VD83 1088 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 SMC1AQ14683 1233 aaKnown RBP11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 ZNF484Q5JVG2 852 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 SYCE2Q6PIF2 218 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 KCNT2Q6UVM3 1135 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 ASCL5Q7RTU5 278 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 HEATR3Q7Z4Q2 680 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 LRRC43Q8N309 656 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 METTL13Q8N6R0 699 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 VN1R2Q8NFZ6 395 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 IGDCC4Q8TDY8 1250 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 PCYT2Q99447 389 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 MXRA8Q9BRK3 442 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 SENP2Q9HC62 589 aa11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 DBR1Q9UK59 544 aaKnown RBP11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 PTPRZ1P23471 2315 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF9-203ENST00000492571 MYH6P13533 1939 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 CARNS1A5YM72 827 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 PRR23AA6NEV1 266 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 NRG2O14511 850 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 PDGFBP01127 241 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 FGFR1P11362 822 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 TMOD1P28289 359 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 UBE2SQ16763 222 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 KIZQ2M2Z5 673 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 CEP55Q53EZ4 464 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 MIS18BP1Q6P0N0 1132 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 PDXDC2PQ6P474 469 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 SYNE3Q6ZMZ3 975 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 TEX2Q8IWB9 1127 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 KIAA0319LQ8IZA0 1049 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 MRPL43Q8N983 215 aaKnown RBP11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 TDRD5Q8NAT2 981 aaKnown RBP11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 NLRP7Q8WX94 980 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 ACSF2Q96CM8 615 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 MTA3Q9BTC8 594 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 SLC12A7Q9Y666 1083 aa11.08□□□□□ -0.64
TNFRSF9-203ENST00000492571 COL1A2P08123 1366 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 HIDE1A8MVS5 230 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 C2CD4DB7Z1M9 353 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 MGEA5O60502 916 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 BRD1O95696 1058 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms