RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 HSP90AA2PQ14568 343 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-210ENST00000490808 KNOP1Q1ED39 458 aaKnown RBP11.3□□□□□ -0.6
HDAC3-210ENST00000490808 PADI6Q6TGC4 694 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 EXOC8Q8IYI6 725 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 BANK1Q8NDB2 785 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 PIGOQ8TEQ8 1089 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 CNOT6LQ96LI5 555 aaKnown RBP11.3□□□□□ -0.6
HDAC3-210ENST00000490808 PANX2Q96RD6 677 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 KATNBL1Q9H079 304 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 UNC93B1Q9H1C4 597 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 KCNF1Q9H3M0 494 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 METTL14Q9HCE5 456 aaKnown RBP11.3□□□□□ -0.6
HDAC3-210ENST00000490808 JPH1Q9HDC5 661 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-210ENST00000490808 TAB2Q9NYJ8 693 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 PKD2L1Q9P0L9 805 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 CGNQ9P2M7 1197 aaKnown RBP11.3□□□□□ -0.6
HDAC3-210ENST00000490808 OGDHLQ9ULD0 1010 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 KAT6AQ92794 2004 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 TRIOBPQ9H2D6 2365 aa11.3□□□□□ -0.6
HDAC3-210ENST00000490808 GOLGA6L9A6NEM1 432 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 H0YCG3 227 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 ZSCAN12O43309 604 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 ZEB2O60315 1214 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 GCNT3O95395 438 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
HDAC3-210ENST00000490808 CNGA1P29973 690 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 YWHABP31946 246 aaKnown RBP11.29□□□□□ -0.6
HDAC3-210ENST00000490808 MNX1P50219 401 aaPredicted RBP11.29□□□□□ -0.6
HDAC3-210ENST00000490808 SMTNP53814 917 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 SNRPFP62306 86 aaKnown RBP11.29□□□□□ -0.6
HDAC3-210ENST00000490808 ITGB3BPQ13352 177 aaPredicted RBP11.29□□□□□ -0.6
HDAC3-210ENST00000490808 MAN2A1Q16706 1144 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 BMT2Q1RMZ1 405 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 DUSP28Q4G0W2 176 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 HS2ST1Q7LGA3 356 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 RNF180Q86T96 592 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 SFR1Q86XK3 245 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 FAM178BQ8IXR5 827 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 PCSK9Q8NBP7 692 aaKnown RBP11.29□□□□□ -0.6
HDAC3-210ENST00000490808 ZNF507Q8TCN5 953 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 U2AF1L4Q8WU68 220 aaKnown RBP11.29□□□□□ -0.6
HDAC3-210ENST00000490808 BAG1Q99933 345 aaPredicted RBP11.29□□□□□ -0.6
HDAC3-210ENST00000490808 TSEN34Q9BSV6 310 aaKnown RBP11.29□□□□□ -0.6
HDAC3-210ENST00000490808 SEMA6BQ9H3T3 888 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 TMEM206Q9H813 350 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 C17orf75Q9HAS0 396 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 KCND1Q9NSA2 647 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 SPTLC3Q9NUV7 552 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 TYW1Q9NV66 732 aaKnown RBP11.29□□□□□ -0.6
HDAC3-210ENST00000490808 ZNHIT6Q9NWK9 470 aaKnown RBP11.29□□□□□ -0.6
HDAC3-210ENST00000490808 ZHX1Q9UKY1 873 aaPredicted RBP11.29□□□□□ -0.6
HDAC3-210ENST00000490808 TRAF3IP3Q9Y228 551 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 PPME1Q9Y570 386 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 PCDHA2Q9Y5H9 948 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 ASTN1O14525 1302 aa11.29□□□□□ -0.6
HDAC3-210ENST00000490808 NPHP3-ACAD11A0A0J9YXS1 232 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 KPNA6O60684 536 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 OFD1O75665 1012 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 PBX1P40424 430 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 ZNF131P52739 623 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 PMS1P54277 932 aaKnown RBP11.28□□□□□ -0.6
HDAC3-210ENST00000490808 GJA9P57773 515 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 TNFAIP2Q03169 654 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 RAD51AP2Q09MP3 1159 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 ADAM9Q13443 819 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 MTFR1Q15390 333 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 NFIL3Q16649 462 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 VWA3BQ502W6 1294 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 XKR9Q5GH70 373 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 ODR4Q5SWX8 454 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 FAM160B1Q5W0V3 765 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 ARMCX5Q6P1M9 558 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 APTXQ7Z2E3 356 aaKnown RBP11.28□□□□□ -0.6
HDAC3-210ENST00000490808 MCPH1Q8NEM0 835 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 EMID1Q96A84 441 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-210ENST00000490808 HVCN1Q96D96 273 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 ZFP91Q96JP5 570 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-210ENST00000490808 PCMTD1Q96MG8 357 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-210ENST00000490808 DEFB118Q96PH6 123 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 HTATIP2Q9BUP3 242 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 AP5M1Q9H0R1 490 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 UPF3AQ9H1J1 476 aaKnown RBP11.28□□□□□ -0.6
HDAC3-210ENST00000490808 TBC1D7Q9P0N9 293 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 EXOC7Q9UPT5 735 aa11.28□□□□□ -0.6
HDAC3-210ENST00000490808 LUC7L2Q9Y383 392 aaKnown RBP11.28□□□□□ -0.6
HDAC3-210ENST00000490808 MYH9P35579 1960 aaKnown RBP11.27□□□□□ -0.61
HDAC3-210ENST00000490808 MOXD2PA6NHM9 499 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 KBTBD13C9JR72 458 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 DNM1LO00429 736 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 BACH1O14867 736 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 TEX33O43247 280 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 CABYRO75952 493 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 TFRCP02786 760 aaKnown RBP11.27□□□□□ -0.61
HDAC3-210ENST00000490808 EPB41P11171 864 aaKnown RBP11.27□□□□□ -0.61
HDAC3-210ENST00000490808 KCNA2P16389 499 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 TRIM21P19474 475 aaKnown RBP11.27□□□□□ -0.61
HDAC3-210ENST00000490808 CCND3P30281 292 aaPredicted RBP11.27□□□□□ -0.61
HDAC3-210ENST00000490808 RARRES1P49788 294 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 CPT1AP50416 773 aa11.27□□□□□ -0.61
HDAC3-210ENST00000490808 MARSP56192 900 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms