RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	DHX33	Q9H6R0	707 aa	Known RBP	20.72	■□□□□ 0.91
C4A-256	ENST00000490663		A0A087WZ62	844 aa		20.71	■□□□□ 0.91
C4A-256	ENST00000490663	RPS6KA5	O75582	802 aa		20.71	■□□□□ 0.91
C4A-256	ENST00000490663	ARHGEF15	O94989	841 aa		20.71	■□□□□ 0.91
C4A-256	ENST00000490663	UPP2	O95045	317 aa		20.71	■□□□□ 0.91
C4A-256	ENST00000490663	RPLP2	P05387	115 aa	Known RBP	20.71	■□□□□ 0.91
C4A-256	ENST00000490663	MARCKS	P29966	332 aa	Predicted RBP	20.71	■□□□□ 0.91
C4A-256	ENST00000490663	HERC6	Q8IVU3	1022 aa		20.71	■□□□□ 0.91
C4A-256	ENST00000490663	SLC7A3	Q8WY07	619 aa		20.71	■□□□□ 0.91
C4A-256	ENST00000490663	MTR	Q99707	1265 aa		20.71	■□□□□ 0.91
C4A-256	ENST00000490663	FDXACB1	Q9BRP7	624 aa	Predicted RBP	20.71	■□□□□ 0.91
C4A-256	ENST00000490663	TTYH1	Q9H313	450 aa	Predicted RBP	20.71	■□□□□ 0.91
C4A-256	ENST00000490663	TMX1	Q9H3N1	280 aa		20.71	■□□□□ 0.91
C4A-256	ENST00000490663	POLD4	Q9HCU8	107 aa		20.71	■□□□□ 0.91
C4A-256	ENST00000490663	ERVK-5	Q9HDB9	667 aa		20.71	■□□□□ 0.91
C4A-256	ENST00000490663	ANKEF1	Q9NU02	776 aa		20.71	■□□□□ 0.91
C4A-256	ENST00000490663	DDX19A	Q9NUU7	478 aa	Known RBP	20.71	■□□□□ 0.91
C4A-256	ENST00000490663	KIAA1024	Q9UPX6	916 aa		20.71	■□□□□ 0.91
C4A-256	ENST00000490663	TRANK1	O15050	2925 aa		20.7	■□□□□ 0.9
C4A-256	ENST00000490663		E9PMD0	336 aa		20.7	■□□□□ 0.9
C4A-256	ENST00000490663	MGEA5	O60502	916 aa		20.7	■□□□□ 0.9
C4A-256	ENST00000490663	RFC5	P40937	340 aa		20.7	■□□□□ 0.9
C4A-256	ENST00000490663	CRYBB1	P53674	252 aa	Predicted RBP	20.7	■□□□□ 0.9
C4A-256	ENST00000490663	PTPA	Q15257	358 aa		20.7	■□□□□ 0.9
C4A-256	ENST00000490663	HAUS3	Q68CZ6	603 aa		20.7	■□□□□ 0.9
C4A-256	ENST00000490663	KCNK18	Q7Z418	384 aa		20.7	■□□□□ 0.9
C4A-256	ENST00000490663	SPRED2	Q7Z698	418 aa		20.7	■□□□□ 0.9
C4A-256	ENST00000490663	RAB34	Q9BZG1	259 aa		20.7	■□□□□ 0.9
C4A-256	ENST00000490663	GPRC5C	Q9NQ84	441 aa		20.7	■□□□□ 0.9
C4A-256	ENST00000490663	LCHN	A4D1U4	455 aa		20.69	■□□□□ 0.9
C4A-256	ENST00000490663	ZSCAN22	P10073	491 aa	Predicted RBP	20.69	■□□□□ 0.9
C4A-256	ENST00000490663	DNM2	P50570	870 aa		20.69	■□□□□ 0.9
C4A-256	ENST00000490663	PDIA5	Q14554	519 aa		20.69	■□□□□ 0.9
C4A-256	ENST00000490663	SPECC1	Q5M775	1068 aa		20.69	■□□□□ 0.9
C4A-256	ENST00000490663	RTN4RL1	Q86UN2	441 aa	Predicted RBP	20.69	■□□□□ 0.9
C4A-256	ENST00000490663	DEFB123	Q8N688	67 aa		20.69	■□□□□ 0.9
C4A-256	ENST00000490663	PRPF31	Q8WWY3	499 aa	Known RBP	20.69	■□□□□ 0.9
C4A-256	ENST00000490663	APBB2	Q92870	758 aa		20.69	■□□□□ 0.9
C4A-256	ENST00000490663	TIFA	Q96CG3	184 aa		20.69	■□□□□ 0.9
C4A-256	ENST00000490663	CHAMP1	Q96JM3	812 aa		20.69	■□□□□ 0.9
C4A-256	ENST00000490663	PNMA5	Q96PV4	448 aa		20.69	■□□□□ 0.9
C4A-256	ENST00000490663	ATP6V0A4	Q9HBG4	840 aa		20.69	■□□□□ 0.9
C4A-256	ENST00000490663	TFIP11	Q9UBB9	837 aa	Known RBP	20.69	■□□□□ 0.9
C4A-256	ENST00000490663	DAXX	Q9UER7	740 aa	Predicted RBP	20.69	■□□□□ 0.9
C4A-256	ENST00000490663	ST3GAL5	Q9UNP4	418 aa		20.69	■□□□□ 0.9
C4A-256	ENST00000490663	COL4A3BP	Q9Y5P4	624 aa		20.69	■□□□□ 0.9
C4A-256	ENST00000490663	CIT	O14578	2027 aa		20.68	■□□□□ 0.9
C4A-256	ENST00000490663	F13A1	P00488	732 aa		20.68	■□□□□ 0.9
C4A-256	ENST00000490663	AMH	P03971	560 aa		20.68	■□□□□ 0.9
C4A-256	ENST00000490663	ZNF697	Q5TEC3	545 aa		20.68	■□□□□ 0.9
C4A-256	ENST00000490663	KRT79	Q5XKE5	535 aa		20.68	■□□□□ 0.9
C4A-256	ENST00000490663	ASAP3	Q8TDY4	903 aa		20.68	■□□□□ 0.9
C4A-256	ENST00000490663	NACC1	Q96RE7	527 aa		20.68	■□□□□ 0.9
C4A-256	ENST00000490663	ZBED2	Q9BTP6	218 aa		20.68	■□□□□ 0.9
C4A-256	ENST00000490663	POLR3F	Q9H1D9	316 aa	Predicted RBP	20.68	■□□□□ 0.9
C4A-256	ENST00000490663	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	20.68	■□□□□ 0.9
C4A-256	ENST00000490663	MSRA	Q9UJ68	235 aa		20.68	■□□□□ 0.9
C4A-256	ENST00000490663	ARHGEF35	A5YM69	484 aa		20.67	■□□□□ 0.9
C4A-256	ENST00000490663	TLL1	O43897	1013 aa		20.67	■□□□□ 0.9
C4A-256	ENST00000490663	CA3	P07451	260 aa		20.67	■□□□□ 0.9
C4A-256	ENST00000490663	SRGAP2C	P0DJJ0	459 aa		20.67	■□□□□ 0.9
C4A-256	ENST00000490663	DARS	P14868	501 aa	Known RBP	20.67	■□□□□ 0.9
C4A-256	ENST00000490663	LAMTOR4	Q0VGL1	99 aa		20.67	■□□□□ 0.9
C4A-256	ENST00000490663	GRB10	Q13322	594 aa		20.67	■□□□□ 0.9
C4A-256	ENST00000490663	ARL6IP4	Q66PJ3	421 aa	Known RBP	20.67	■□□□□ 0.9
C4A-256	ENST00000490663	PSPC1	Q8WXF1	523 aa	Known RBP	20.67	■□□□□ 0.9
C4A-256	ENST00000490663	CLIC6	Q96NY7	704 aa		20.67	■□□□□ 0.9
C4A-256	ENST00000490663	JPH2	Q9BR39	696 aa	Predicted RBP	20.67	■□□□□ 0.9
C4A-256	ENST00000490663	BHMT2	Q9H2M3	363 aa		20.67	■□□□□ 0.9
C4A-256	ENST00000490663	CERS4	Q9HA82	394 aa		20.67	■□□□□ 0.9
C4A-256	ENST00000490663	DBR1	Q9UK59	544 aa	Known RBP	20.67	■□□□□ 0.9
C4A-256	ENST00000490663	SQOR	Q9Y6N5	450 aa		20.67	■□□□□ 0.9
C4A-256	ENST00000490663	PDCD11	Q14690	1871 aa	Known RBP	20.67	■□□□□ 0.9
C4A-256	ENST00000490663	CDH23	Q9H251	3354 aa		20.66	■□□□□ 0.9
C4A-256	ENST00000490663	ENPP3	O14638	875 aa		20.66	■□□□□ 0.9
C4A-256	ENST00000490663	EFCAB14	O75071	495 aa		20.66	■□□□□ 0.9
C4A-256	ENST00000490663	RAB30	Q15771	203 aa		20.66	■□□□□ 0.9
C4A-256	ENST00000490663	PADI6	Q6TGC4	694 aa		20.66	■□□□□ 0.9
C4A-256	ENST00000490663	USP49	Q70CQ1	688 aa		20.66	■□□□□ 0.9
C4A-256	ENST00000490663	CABP7	Q86V35	215 aa		20.66	■□□□□ 0.9
C4A-256	ENST00000490663	USP38	Q8NB14	1042 aa		20.66	■□□□□ 0.9
C4A-256	ENST00000490663	LRRC15	Q8TF66	581 aa		20.66	■□□□□ 0.9
C4A-256	ENST00000490663	MINDY3	Q9H8M7	445 aa		20.66	■□□□□ 0.9
C4A-256	ENST00000490663	FBXO2	Q9UK22	296 aa	Predicted RBP	20.66	■□□□□ 0.9
C4A-256	ENST00000490663	PCDHA11	Q9Y5I1	949 aa		20.66	■□□□□ 0.9
C4A-256	ENST00000490663	REV3L	O60673	3130 aa		20.66	■□□□□ 0.9
C4A-256	ENST00000490663	DGAT1	O75907	488 aa		20.65	■□□□□ 0.9
C4A-256	ENST00000490663	GJB5	O95377	273 aa		20.65	■□□□□ 0.9
C4A-256	ENST00000490663	EIF4B	P23588	611 aa	Known RBP	20.65	■□□□□ 0.9
C4A-256	ENST00000490663	GATM	P50440	423 aa		20.65	■□□□□ 0.9
C4A-256	ENST00000490663	CAPS	Q13938	189 aa		20.65	■□□□□ 0.9
C4A-256	ENST00000490663	PHOSPHO2	Q8TCD6	241 aa		20.65	■□□□□ 0.9
C4A-256	ENST00000490663	ADAM2	Q99965	735 aa		20.65	■□□□□ 0.9
C4A-256	ENST00000490663	GCOM2	Q9BZD3	368 aa	Predicted RBP	20.65	■□□□□ 0.9
C4A-256	ENST00000490663	CSRNP2	Q9H175	543 aa		20.65	■□□□□ 0.9
C4A-256	ENST00000490663	PPME1	Q9Y570	386 aa		20.65	■□□□□ 0.9
C4A-256	ENST00000490663	BMP15	O95972	392 aa		20.64	■□□□□ 0.89
C4A-256	ENST00000490663	SSB	P05455	408 aa	Known RBP eCLIP	20.64	■□□□□ 0.89
C4A-256	ENST00000490663	GLRA2	P23416	452 aa		20.64	■□□□□ 0.89
C4A-256	ENST00000490663	BECN1	Q14457	450 aa		20.64	■□□□□ 0.89

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms