RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 LRRC71Q8N4P6 559 aa12.68□□□□□ -0.38
DUBR-204ENST00000490441 RDM1Q8NG50 284 aa12.68□□□□□ -0.38
DUBR-204ENST00000490441 SLC5A5Q92911 643 aa12.68□□□□□ -0.38
DUBR-204ENST00000490441 KHSRPQ92945 711 aaKnown RBP eCLIP12.68□□□□□ -0.38
DUBR-204ENST00000490441 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
DUBR-204ENST00000490441 POP1Q99575 1024 aaKnown RBP12.68□□□□□ -0.38
DUBR-204ENST00000490441 UPF3BQ9BZI7 483 aaKnown RBP12.68□□□□□ -0.38
DUBR-204ENST00000490441 TM6SF1Q9BZW5 370 aa12.68□□□□□ -0.38
DUBR-204ENST00000490441 UNC45AQ9H3U1 944 aa12.68□□□□□ -0.38
DUBR-204ENST00000490441 PDRG1Q9NUG6 133 aa12.68□□□□□ -0.38
DUBR-204ENST00000490441 TMEM161AQ9NX61 479 aa12.68□□□□□ -0.38
DUBR-204ENST00000490441 CD207Q9UJ71 328 aa12.68□□□□□ -0.38
DUBR-204ENST00000490441 ATG2AQ2TAZ0 1938 aa12.68□□□□□ -0.38
DUBR-204ENST00000490441 KIAA1671Q9BY89 1806 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 FAM86C2PA6NEL3 165 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 ZNF862O60290 1169 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 CDKL5O76039 1030 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 LAG3P18627 525 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 EIF4BP23588 611 aaKnown RBP12.67□□□□□ -0.38
DUBR-204ENST00000490441 DNAJB1P25685 340 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 GTF2F1P35269 517 aaKnown RBP eCLIP12.67□□□□□ -0.38
DUBR-204ENST00000490441 LTBRP36941 435 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 UBE3AQ05086 875 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 ZP2Q05996 745 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 SMAD4Q13485 552 aaKnown RBP12.67□□□□□ -0.38
DUBR-204ENST00000490441 CAMK1Q14012 370 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 Q4G0T1 1027 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 FAM102BQ5T8I3 360 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 ADHFE1Q8IWW8 467 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 EFCAB3Q8N7B9 438 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 DAGLBQ8NCG7 672 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 NLRP7Q8WX94 980 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 FAM122AQ96E09 287 aa12.67□□□□□ -0.38
DUBR-204ENST00000490441 LARP6Q9BRS8 491 aaKnown RBP12.67□□□□□ -0.38
DUBR-204ENST00000490441 ELAC1Q9H777 363 aaKnown RBP12.67□□□□□ -0.38
DUBR-204ENST00000490441 SEPT9Q9UHD8 586 aaPredicted RBP12.67□□□□□ -0.38
DUBR-204ENST00000490441 WDR81Q562E7 1941 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 FSD2A1L4K1 749 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 LINC01565O15544 149 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 MBTPS2O43462 519 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 DCXO43602 365 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 TBX10O75333 385 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 FGF18O76093 207 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 TDP2O95551 362 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 FGFR1P11362 822 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 XBP1P17861 261 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 IRS1P35568 1242 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 NRIP1P48552 1158 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 DNM2P50570 870 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 DLX2Q07687 328 aaPredicted RBP12.66□□□□□ -0.38
DUBR-204ENST00000490441 ADAM15Q13444 863 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 NONOQ15233 471 aaKnown RBP eCLIP12.66□□□□□ -0.38
DUBR-204ENST00000490441 SMAD2Q15796 467 aaKnown RBP12.66□□□□□ -0.38
DUBR-204ENST00000490441 UGCGQ16739 394 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 MOXD1Q6UVY6 613 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 KRT25Q7Z3Z0 450 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 RBM23Q86U06 439 aaKnown RBP12.66□□□□□ -0.38
DUBR-204ENST00000490441 EFHBQ8N7U6 833 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 RNF169Q8NCN4 708 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 GJA10Q969M2 543 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 TMEM117Q9H0C3 514 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 ADAMTS10Q9H324 1103 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 TLE6Q9H808 572 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 TLR9Q9NR96 1032 aa12.66□□□□□ -0.38
DUBR-204ENST00000490441 TYW1Q9NV66 732 aaKnown RBP12.66□□□□□ -0.38
DUBR-204ENST00000490441 DDX25Q9UHL0 483 aaKnown RBP12.66□□□□□ -0.38
DUBR-204ENST00000490441 FNDC1Q4ZHG4 1894 aaPredicted RBP12.65□□□□□ -0.38
DUBR-204ENST00000490441 CYP3A7-CYP3A51PA0A087WV96 503 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 CCDC194A0A1B0GVG4 234 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 EDIL3O43854 480 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 PSMD10O75832 226 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 DARSP14868 501 aaKnown RBP12.65□□□□□ -0.38
DUBR-204ENST00000490441 CYP3A7P24462 503 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 PLA2G5P39877 138 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 GPC3P51654 580 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 FAM189BP81408 668 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 CDC42EP1Q00587 391 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 DSC3Q14574 896 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 MTERF2Q49AM1 385 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 XKR3Q5GH77 459 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 PDE12Q6L8Q7 609 aaKnown RBP12.65□□□□□ -0.38
DUBR-204ENST00000490441 ADGRD2Q7Z7M1 963 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 LRRC43Q8N309 656 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 LINC01465Q8N7H1 131 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 COLGALT1Q8NBJ5 622 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 ZNF668Q96K58 619 aaPredicted RBP12.65□□□□□ -0.38
DUBR-204ENST00000490441 GCOM2Q9BZD3 368 aaPredicted RBP12.65□□□□□ -0.38
DUBR-204ENST00000490441 SLKQ9H2G2 1235 aaPredicted RBP12.65□□□□□ -0.38
DUBR-204ENST00000490441 C11orf16Q9NQ32 467 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 DACT1Q9NYF0 836 aa12.65□□□□□ -0.38
DUBR-204ENST00000490441 PUF60Q9UHX1 559 aaKnown RBP12.65□□□□□ -0.38
DUBR-204ENST00000490441 MUC6Q6W4X9 2439 aa12.64□□□□□ -0.39
DUBR-204ENST00000490441 DDX11L8A8MPP1 907 aa12.64□□□□□ -0.39
DUBR-204ENST00000490441 PRR33A8MZF0 331 aa12.64□□□□□ -0.39
DUBR-204ENST00000490441 SRGAP2BP0DMP2 458 aa12.64□□□□□ -0.39
DUBR-204ENST00000490441 PPM1AP35813 382 aa12.64□□□□□ -0.39
DUBR-204ENST00000490441 INF2Q27J81 1249 aa12.64□□□□□ -0.39
DUBR-204ENST00000490441 LETM2Q2VYF4 491 aa12.64□□□□□ -0.39
DUBR-204ENST00000490441 ECHDC2Q86YB7 292 aa12.64□□□□□ -0.39
DUBR-204ENST00000490441 AIFM3Q96NN9 605 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms