RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 ALDH8A1Q9H2A2 487 aaPredicted RBP10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 JMJD4Q9H9V9 463 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 SEC63Q9UGP8 760 aaKnown RBP10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 PCDHA1Q9Y5I3 950 aa10.21□□□□□ -0.77
TNRC6B-208ENST00000489500 TRIP12Q14669 1992 aaPredicted RBP10.21□□□□□ -0.78
TNRC6B-208ENST00000489500 SCN10AQ9Y5Y9 1956 aa10.21□□□□□ -0.78
TNRC6B-208ENST00000489500 KAT6AQ92794 2004 aa10.21□□□□□ -0.78
TNRC6B-208ENST00000489500 DNAH12Q6ZR08 3092 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 E7EWF7 191 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 GCOM1H8Y6P7 765 aaPredicted RBP10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 J3QW42 95 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 CYP21A2P08686 494 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 POLR2MP0CAP2 368 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 GSPT1P15170 499 aaKnown RBP10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 EIF2AK2P19525 551 aaKnown RBP10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 EPHB4P54760 987 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 NRLP54845 237 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 CCL23P55773 120 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 CHMP4BP1P59074 171 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 NRG1Q02297 640 aaPredicted RBP10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 GRM4Q14833 912 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 SEC23AQ15436 765 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 GNPTABQ3T906 1256 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 SYNE3Q6ZMZ3 975 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 NFXL1Q6ZNB6 911 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 HOMER1Q86YM7 354 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 DHX37Q8IY37 1157 aaKnown RBP10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 MAFAQ8NHW3 353 aaPredicted RBP10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 GUCD1Q96NT3 240 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 TAAR1Q96RJ0 339 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 TRPV6Q9H1D0 765 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 CPVLQ9H3G5 476 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 SLC28A3Q9HAS3 691 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 BAZ2BQ9UIF8 2168 aaKnown RBP10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 MRVI1Q9Y6F6 885 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 SLC4A7Q9Y6M7 1214 aa10.2□□□□□ -0.78
TNRC6B-208ENST00000489500 PNMA6FA0A0J9YX94 578 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 CCDC69A6NI79 296 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 KIF28PB7ZC32 967 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 SGSM2O43147 1006 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 MMP20O60882 483 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 STAM2O75886 525 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 CALM1P0DP23 149 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 CALM2P0DP24 149 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 CALM3P0DP25 149 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 ACRP10323 421 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 TGFB3P10600 412 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 MYCLP12524 364 aaPredicted RBP10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 CCND2P30279 289 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 MCM5P33992 734 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 PRSS36Q5K4E3 855 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 CYB5R4Q7L1T6 521 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 CHST3Q7LGC8 479 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 WFDC8Q8IUA0 241 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 C7orf31Q8N865 590 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 CAGE1Q8TC20 777 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 MYLIPQ8WY64 445 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 TTC9Q92623 222 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 RRP36Q96EU6 259 aaKnown RBP10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 TMEM87BQ96K49 555 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 MAP3K14Q99558 947 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 NOC4LQ9BVI4 516 aaKnown RBP10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 FTOQ9C0B1 505 aaKnown RBP eCLIP10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 ZNF576Q9H609 170 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 PXMP2Q9NR77 195 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 MAD2L2Q9UI95 211 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 GBF1Q92538 1859 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 SZT2Q5T011 3432 aa10.19□□□□□ -0.78
TNRC6B-208ENST00000489500 GRIN2DO15399 1336 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 DDAH1O94760 285 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 MMP3P08254 477 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 SMARCA1P28370 1054 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 HSD17B4P51659 736 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 IRX6P78412 446 aaPredicted RBP10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 PTH1RQ03431 593 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 PTGISQ16647 500 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 LY6KQ17RY6 165 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 CCDC62Q6P9F0 684 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 OTOP2Q7RTS6 562 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 DTWD1Q8N5C7 304 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 AFG1LQ8WV93 481 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 MAP4K1Q92918 833 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 MKNK1Q9BUB5 465 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 RIOX1Q9H6W3 641 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 MLXIPQ9HAP2 919 aa10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 TRMT13Q9NUP7 481 aaKnown RBP10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 DDX49Q9Y6V7 483 aaKnown RBP10.18□□□□□ -0.78
TNRC6B-208ENST00000489500 PPFIA4O75335 1185 aa10.17□□□□□ -0.78
TNRC6B-208ENST00000489500 DEAF1O75398 565 aaPredicted RBP10.17□□□□□ -0.78
TNRC6B-208ENST00000489500 CYP2C9P11712 490 aa10.17□□□□□ -0.78
TNRC6B-208ENST00000489500 KCNJ6P48051 423 aa10.17□□□□□ -0.78
TNRC6B-208ENST00000489500 GHRHRQ02643 423 aa10.17□□□□□ -0.78
TNRC6B-208ENST00000489500 TMEM63BQ5T3F8 832 aa10.17□□□□□ -0.78
TNRC6B-208ENST00000489500 RASIP1Q5U651 963 aa10.17□□□□□ -0.78
TNRC6B-208ENST00000489500 C16orf46Q6P387 395 aa10.17□□□□□ -0.78
TNRC6B-208ENST00000489500 STOX1Q6ZVD7 989 aa10.17□□□□□ -0.78
TNRC6B-208ENST00000489500 C16orf59Q7L2K0 433 aa10.17□□□□□ -0.78
TNRC6B-208ENST00000489500 SESTD1Q86VW0 696 aa10.17□□□□□ -0.78
TNRC6B-208ENST00000489500 PPTC7Q8NI37 304 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms