RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261	CTAGE9	A4FU28	777 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	SFI1	A8K8P3	1242 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	ZBTB39	O15060	712 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	AKAP3	O75969	853 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	SERPING1	P05155	500 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	TGFB3	P10600	412 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	KCNA2	P16389	499 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	GJA5	P36382	358 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	KLK7	P49862	253 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	MCCD1	P59942	119 aa	Predicted RBP	11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	IRX3	P78415	501 aa	Predicted RBP	11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	GTF2B	Q00403	316 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	SREBF2	Q12772	1141 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	MKRN3	Q13064	507 aa	Known RBP	11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	SLC9C1	Q4G0N8	1177 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	KCNV1	Q6PIU1	500 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	GBP6	Q6ZN66	633 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	RRAGA	Q7L523	313 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	KIAA1328	Q86T90	577 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	FAM186B	Q8IYM0	893 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	SYCP3	Q8IZU3	236 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	ANKRD35	Q8N283	1001 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	ACRBP	Q8NEB7	543 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	MCPH1	Q8NEM0	835 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	SPIRE2	Q8WWL2	714 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	ANKRD7	Q92527	254 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	KIFAP3	Q92845	792 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	SLC10A4	Q96EP9	437 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	BORCS6	Q96GS4	357 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	NTPCR	Q9BSD7	190 aa	Known RBP	11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	LSM14B	Q9BX40	385 aa	Known RBP	11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	CFHR5	Q9BXR6	569 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	LZTFL1	Q9NQ48	299 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	AIPL1	Q9NZN9	384 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	PKD2L1	Q9P0L9	805 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	SLC9A2	Q9UBY0	812 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	MANSC4	A6NHS7	340 aa	Predicted RBP	11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	P4HA2	O15460	535 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	N4BP1	O75113	896 aa	Known RBP	11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	ATG7	O95352	703 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	CCNE2	O96020	404 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	ARHGAP25	P42331	645 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	VAV2	P52735	878 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	ENPEP	Q07075	957 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	EXOC3L4	Q17RC7	722 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	XKR9	Q5GH70	373 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	ZNF569	Q5MCW4	686 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	C10orf76	Q5T2E6	689 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	ABHD15	Q6UXT9	468 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	GADL1	Q6ZQY3	521 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	DAW1	Q8N136	415 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	MNS1	Q8NEH6	495 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	KCNN1	Q92952	543 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	NAPG	Q99747	312 aa	Predicted RBP	11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	SPATC1L	Q9H0A9	340 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	DEF6	Q9H4E7	631 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	JPH1	Q9HDC5	661 aa	Predicted RBP	11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	AGPAT3	Q9NRZ7	376 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	AGTPBP1	Q9UPW5	1226 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	PPME1	Q9Y570	386 aa		11.87	□□□□□ -0.51
ITSN1-231	ENST00000489261	LRRC53	A6NM62	1247 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	EFCAB8	A8MWE9	144 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	POTEB2	H3BUK9	544 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261		K7ENM7	598 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	CLIC2	O15247	247 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	PMM2	O15305	246 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	AKR1B10	O60218	316 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	DGAT1	O75907	488 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	NOL4	O94818	638 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	CCDC172	P0C7W6	258 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	KRT13	P13646	458 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	NCKAP1L	P55160	1127 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	INHBE	P58166	350 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	CETN1	Q12798	172 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	KIF5A	Q12840	1032 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	NEDD9	Q14511	834 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	XKR3	Q5GH77	459 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	CCDC122	Q5T0U0	273 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	KLHDC7A	Q5VTJ3	777 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	PDCL2	Q8N4E4	241 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	CEP112	Q8N8E3	955 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	JAKMIP2	Q96AA8	810 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	WDR24	Q96S15	920 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	ELP3	Q9H9T3	547 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	GABBR1	Q9UBS5	961 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	ZNF215	Q9UL58	517 aa	Predicted RBP	11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	REXO2	Q9Y3B8	237 aa	Known RBP	11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	MRFAP1	Q9Y605	127 aa		11.86	□□□□□ -0.51
ITSN1-231	ENST00000489261	RBAK-RBAKDN	I3L0D1	243 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	BACH1	O14867	736 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	NKRF	O15226	690 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	PJA2	O43164	708 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	RRP9	O43818	475 aa	Known RBP	11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	RGS20	O76081	388 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	SUPT20HL2	P0C7V6	817 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	RFX1	P22670	979 aa		11.85	□□□□□ -0.51
ITSN1-231	ENST00000489261	EDNRB	P24530	442 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms