RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 WRAP73Q9P2S5 460 aaPredicted RBP8.07□□□□□ -1.12
UBE4B-209ENST00000487244 TCEAL9Q9UHQ7 104 aa8.07□□□□□ -1.12
UBE4B-209ENST00000487244 COL4A4P53420 1690 aaPredicted RBP8.07□□□□□ -1.12
UBE4B-209ENST00000487244 COL4A6Q14031 1691 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 RRN3P2A6NIE6 340 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 HBP1O60381 514 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 CAND2O75155 1236 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 ACTN1P12814 892 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 ATP2B1P20020 1258 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 SFNP31947 248 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 CLCN3P51790 818 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 JAK3P52333 1124 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 MRPS6P82932 125 aaKnown RBP8.06□□□□□ -1.12
UBE4B-209ENST00000487244 HMGN5P82970 282 aaKnown RBP8.06□□□□□ -1.12
UBE4B-209ENST00000487244 SPIRE1Q08AE8 756 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 PPP2R5CQ13362 524 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 LPIN1Q14693 890 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 PLEKHG4Q58EX7 1191 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 FAM26DQ5JW98 314 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 ZNF697Q5TEC3 545 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.06□□□□□ -1.12
UBE4B-209ENST00000487244 SPRED2Q7Z698 418 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 RPAINQ86UA6 219 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 FAM184AQ8NB25 1140 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 TIFAQ96CG3 184 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 IRX2Q9BZI1 471 aaPredicted RBP8.06□□□□□ -1.12
UBE4B-209ENST00000487244 MTIF3Q9H2K0 278 aaKnown RBP8.06□□□□□ -1.12
UBE4B-209ENST00000487244 TMEM60Q9H2L4 133 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 SEMA6BQ9H3T3 888 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 AGO3Q9H9G7 860 aaKnown RBP8.06□□□□□ -1.12
UBE4B-209ENST00000487244 PRDM9Q9NQV7 894 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 PCDHA2Q9Y5H9 948 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 CDY2AQ9Y6F7 541 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 TTC3P53804 2025 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 COL1A2P08123 1366 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 NLRC5Q86WI3 1866 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 KIAA1671Q9BY89 1806 aa8.06□□□□□ -1.12
UBE4B-209ENST00000487244 LCHNA4D1U4 455 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 NEMFO60524 1076 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 BAIAP3O94812 1187 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 PARNO95453 639 aaKnown RBP8.05□□□□□ -1.12
UBE4B-209ENST00000487244 VTNP04004 478 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 GJB2P29033 226 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 MCM7P33993 719 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 DRP2Q13474 957 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 GRIN2CQ14957 1233 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 CALCRLQ16602 461 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 ZNF484Q5JVG2 852 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 FBXO47Q5MNV8 452 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 PLA2G4FQ68DD2 849 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 NCAPH2Q6IBW4 605 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 FAM117BQ6P1L5 589 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 NOSTRINQ8IVI9 506 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 HERC6Q8IVU3 1022 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 KIAA0319LQ8IZA0 1049 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 LRRC71Q8N4P6 559 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 RDM1Q8NG50 284 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 TMEM40Q8WWA1 233 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 LINC01599Q8WXQ3 324 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 SYMPKQ92797 1274 aaKnown RBP8.05□□□□□ -1.12
UBE4B-209ENST00000487244 FAM20AQ96MK3 541 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 CEP89Q96ST8 783 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 SLC9A7Q96T83 725 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 IFIH1Q9BYX4 1025 aaKnown RBP8.05□□□□□ -1.12
UBE4B-209ENST00000487244 FOXP1Q9H334 677 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-209ENST00000487244 ZNF576Q9H609 170 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 PCDHGC3Q9UN70 934 aa8.05□□□□□ -1.12
UBE4B-209ENST00000487244 PRRC2BQ5JSZ5 2229 aaKnown RBP8.05□□□□□ -1.12
UBE4B-209ENST00000487244 ATG2AQ2TAZ0 1938 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 SMIM35A0A1B0GVV1 85 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 ABHD14A-ACY1A0A1B0GW23 586 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-209ENST00000487244 ZBTB39O15060 712 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 TBX3O15119 743 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 CA3P07451 260 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 CD52P31358 61 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 KCNJ6P48051 423 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 TOB1P50616 345 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-209ENST00000487244 CYP4A11Q02928 519 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 IKBKEQ14164 716 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 CTTNQ14247 550 aaKnown RBP8.04□□□□□ -1.12
UBE4B-209ENST00000487244 SAFBQ15424 915 aaKnown RBP eCLIP8.04□□□□□ -1.12
UBE4B-209ENST00000487244 TARBP2Q15633 366 aaKnown RBP8.04□□□□□ -1.12
UBE4B-209ENST00000487244 ZNF174Q15697 407 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 RAB30Q15771 203 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 KIZQ2M2Z5 673 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 TMEM266Q2M3C6 531 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 MTERF2Q49AM1 385 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 ANO5Q75V66 913 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 RSPH3Q86UC2 560 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 RETREG3Q86VR2 466 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 METTL13Q8N6R0 699 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 LINC01465Q8N7H1 131 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 MYLIPQ8WY64 445 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 SEPT8Q92599 483 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 ZNF668Q96K58 619 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-209ENST00000487244 FAM167AQ96KS9 214 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 MTMR9Q96QG7 549 aa8.04□□□□□ -1.12
UBE4B-209ENST00000487244 CDX2Q99626 313 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-209ENST00000487244 NAP1L4Q99733 375 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms