RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 RSAD2Q8WXG1 361 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 ZBTB10Q96DT7 871 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 EPC1Q9H2F5 836 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 IGSF9Q9P2J2 1179 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 ANAPC4Q9UJX5 808 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 USP18Q9UMW8 372 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 MRPL11Q9Y3B7 192 aaKnown RBP9.59□□□□□ -0.87
XRN1-212ENST00000486211 SIT1Q9Y3P8 196 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 PCDHB7Q9Y5E2 793 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 PCDHGA2Q9Y5H1 932 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 PATJQ8NI35 1801 aa9.59□□□□□ -0.88
XRN1-212ENST00000486211 KAT6AQ92794 2004 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 ZZEF1O43149 2961 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 SOBPA7XYQ1 873 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 C9IYK1 514 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 LILRB5O75023 590 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 LRRN2O75325 713 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 CFBP00751 764 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 PROS1P07225 676 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 EPCAMP16422 314 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 RFX1P22670 979 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 PBX3P40426 434 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 PPFIA1Q13136 1202 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 PAK2Q13177 524 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 QRICH1Q2TAL8 776 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 PLA2G2CQ5R387 149 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 GPATCH4Q5T3I0 446 aaKnown RBP9.58□□□□□ -0.88
XRN1-212ENST00000486211 KCNT2Q6UVM3 1135 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 TMC5Q6UXY8 1006 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 CCDC149Q6ZUS6 474 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 CYFIP1Q7L576 1253 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 GPR149Q86SP6 731 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 ADGRF4Q8IZF3 695 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 RDH13Q8NBN7 331 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 PJA1Q8NG27 643 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 NETO1Q8TDF5 533 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 SLC22A17Q8WUG5 538 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 NELL1Q92832 810 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 FBXO4Q9UKT5 387 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 TRPV2Q9Y5S1 764 aa9.58□□□□□ -0.88
XRN1-212ENST00000486211 C2orf16Q68DN1 1984 aa9.57□□□□□ -0.88
XRN1-212ENST00000486211 DDX11L8A8MPP1 907 aa9.57□□□□□ -0.88
XRN1-212ENST00000486211 FGFR1P11362 822 aa9.57□□□□□ -0.88
XRN1-212ENST00000486211 SRFP11831 508 aa9.57□□□□□ -0.88
XRN1-212ENST00000486211 IBSPP21815 317 aaPredicted RBP9.57□□□□□ -0.88
XRN1-212ENST00000486211 CCND2P30279 289 aa9.57□□□□□ -0.88
XRN1-212ENST00000486211 MRPS9P82933 396 aaKnown RBP9.57□□□□□ -0.88
XRN1-212ENST00000486211 TMEM62Q0P6H9 643 aa9.57□□□□□ -0.88
XRN1-212ENST00000486211 TMEM266Q2M3C6 531 aa9.57□□□□□ -0.88
XRN1-212ENST00000486211 IER5Q5VY09 327 aa9.57□□□□□ -0.88
XRN1-212ENST00000486211 FTSJ3Q8IY81 847 aaKnown RBP9.57□□□□□ -0.88
XRN1-212ENST00000486211 SLC44A3Q8N4M1 653 aa9.57□□□□□ -0.88
XRN1-212ENST00000486211 GPR152Q8TDT2 470 aa9.57□□□□□ -0.88
XRN1-212ENST00000486211 SECISBP2LQ93073 1101 aaKnown RBP9.57□□□□□ -0.88
XRN1-212ENST00000486211 INPP4AQ96PE3 977 aaPredicted RBP9.57□□□□□ -0.88
XRN1-212ENST00000486211 FOXQ1Q9C009 403 aa9.57□□□□□ -0.88
XRN1-212ENST00000486211 FAM49AQ9H0Q0 323 aaPredicted RBP9.57□□□□□ -0.88
XRN1-212ENST00000486211 ARHGEF3Q9NR81 526 aa9.57□□□□□ -0.88
XRN1-212ENST00000486211 RNF19AQ9NV58 838 aa9.57□□□□□ -0.88
XRN1-212ENST00000486211 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.57□□□□□ -0.88
XRN1-212ENST00000486211 KDM3AQ9Y4C1 1321 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 COL4A3Q01955 1670 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 SPATA31C2B4DYI2 1134 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 HOXA13P31271 388 aaPredicted RBP9.56□□□□□ -0.88
XRN1-212ENST00000486211 PPM1AP35813 382 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 KRT17Q04695 432 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 NEDD9Q14511 834 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 SLC39A11Q8N1S5 342 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 NLRP7Q8WX94 980 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 ATRIPQ8WXE1 791 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 ZNF558Q96NG5 402 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 CASD1Q96PB1 797 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 ADAM2Q99965 735 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 CELF4Q9BZC1 486 aaKnown RBP9.56□□□□□ -0.88
XRN1-212ENST00000486211 RGS18Q9NS28 235 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 C1orf112Q9NSG2 853 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 ECHDC1Q9NTX5 307 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 SPG21Q9NZD8 308 aa9.56□□□□□ -0.88
XRN1-212ENST00000486211 MYH6P13533 1939 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 TBC1D4O60343 1298 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 PPP1R11O60927 126 aaPredicted RBP9.55□□□□□ -0.88
XRN1-212ENST00000486211 RPLP2P05387 115 aaKnown RBP9.55□□□□□ -0.88
XRN1-212ENST00000486211 STARD6P59095 220 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 FAM189BP81408 668 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 SP4Q02446 784 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 LETM2Q2VYF4 491 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 ZMYM1Q5SVZ6 1142 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 N4BP2L1Q5TBK1 243 aaPredicted RBP9.55□□□□□ -0.88
XRN1-212ENST00000486211 SLC24A5Q71RS6 500 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 TTC14Q96N46 770 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 TMEM117Q9H0C3 514 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 SFXN1Q9H9B4 322 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 JMJD4Q9H9V9 463 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 TMEM161AQ9NX61 479 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 ZSCAN32Q9NX65 697 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 MAP3K20Q9NYL2 800 aaKnown RBP9.55□□□□□ -0.88
XRN1-212ENST00000486211 ZMIZ1Q9ULJ6 1067 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 IRAK3Q9Y616 596 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 CEP295Q9C0D2 2601 aa9.55□□□□□ -0.88
XRN1-212ENST00000486211 FRMPD4Q14CM0 1322 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms