RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 CCDC50Q8IVM0 306 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 DNAJC10Q8IXB1 793 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 ETFBKMTQ8IXQ9 262 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 ZNF34Q8IZ26 560 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 SRBD1Q8N5C6 995 aaKnown RBP5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 CSGALNACT2Q8N6G5 542 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 ARFGAP2Q8N6H7 521 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 OTUD6BQ8N6M0 293 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 MYCBPAPQ8TBZ2 947 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 ZNF473Q8WTR7 871 aaKnown RBP5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 HDAC7Q8WUI4 952 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 PIK3R5Q8WYR1 880 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 ANKS1AQ92625 1134 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 STAMQ92783 540 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 CCDC47Q96A33 483 aaKnown RBP5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 ATP6V1G3Q96LB4 118 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 RNPC3Q96LT9 517 aaKnown RBP5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 CCDC42Q96M95 316 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 GDAP1L1Q96MZ0 367 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 INPP4AQ96PE3 977 aaPredicted RBP5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 NOX5Q96PH1 765 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 CARD10Q9BWT7 1032 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 TLR10Q9BXR5 811 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 TRIM9Q9C026 710 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 EHD4Q9H223 541 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 CXorf56Q9H5V9 222 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 MLXIPQ9HAP2 919 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 PLCB1Q9NQ66 1216 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 TOMM22Q9NS69 142 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 RBM12Q9NTZ6 932 aaKnown RBP5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 AGPAT5Q9NUQ2 364 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 DONSONQ9NYP3 566 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 ZFATQ9P243 1243 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 MCM8Q9UJA3 840 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 PCDHA4Q9UN74 947 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 TFR2Q9UP52 801 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 PCDHGC5Q9Y5F6 944 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 FAM205AQ6ZU69 1335 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 ROBO3Q96MS0 1386 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 ROBO1Q9Y6N7 1651 aa5.15□□□□□ -1.58
SMARCC1-206ENST00000485737 MYH8P13535 1937 aa5.15□□□□□ -1.58
SMARCC1-206ENST00000485737 LOC102724159A0A0B4J2E5 919 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 C1QTNF9BB2RNN3 333 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 RGS9O75916 674 aaPredicted RBP5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 MOCS3O95396 460 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 FGFR1OPO95684 399 aaKnown RBP5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 CCDC172P0C7W6 258 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 SPATA31C1P0DKV0 1188 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 CYP7A1P22680 504 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 KIF5BP33176 963 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 MCM7P33993 719 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 EIF4A3P38919 411 aaKnown RBP5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 MDH1P40925 334 aaKnown RBP5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 UBA7P41226 1012 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 MAGEA1P43355 309 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 CHRNA4P43681 627 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 MTIF2P46199 727 aaKnown RBP5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 KLK7P49862 253 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 MNAT1P51948 309 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 NLRP5P59047 1200 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 TNNC1P63316 161 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 CYP27A1Q02318 531 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 LRRC63Q05C16 580 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 ITGB3BPQ13352 177 aaPredicted RBP5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 BIRC3Q13489 604 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 CUL1Q13616 776 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 NEDD9Q14511 834 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 GRM4Q14833 912 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 PWP2Q15269 919 aaKnown RBP5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 CHRNA2Q15822 529 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 HLFQ16534 295 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 VWA3BQ502W6 1294 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 SBK1Q52WX2 424 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 LACTB2Q53H82 288 aaPredicted RBP5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 CCDC181Q5TID7 509 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 AGBL2Q5U5Z8 902 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 KLHDC7AQ5VTJ3 777 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 HGSNATQ68CP4 663 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 CENPPQ6IPU0 288 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 NFRKBQ6P4R8 1299 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 PDXDC1Q6P996 788 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 DTHD1Q6ZMT9 781 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 HFE2Q6ZVN8 426 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 ARMC9Q7Z3E5 817 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 ADGRA1Q86SQ6 560 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 NLRP14Q86W24 1093 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 BLIDQ8IZY5 108 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 MIGA1Q8NAN2 632 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 LRRC15Q8TF66 581 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 CCDC43Q96MW1 224 aaKnown RBP5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 NOC4LQ9BVI4 516 aaKnown RBP5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 KRTAP9-2Q9BYQ4 174 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 TMBIM4Q9HC24 238 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 LUC7LQ9NQ29 371 aaKnown RBP5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 TMOD3Q9NYL9 352 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 SLC12A6Q9UHW9 1150 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 NAGPAQ9UK23 515 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 TMEM59LQ9UK28 342 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 MAPK8IP1Q9UQF2 711 aa5.15□□□□□ -1.59
SMARCC1-206ENST00000485737 CAPN7Q9Y6W3 813 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms