RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.21□□□□□ -0.293e-6■■□□□ 12.8
APTX-227ENST00000485479 AGO3Q9H9G7 860 aaKnown RBP13.21□□□□□ -0.29
APTX-227ENST00000485479 A0A087WZ62 844 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 A0A1B0GVL5 298 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 MAGEB2O15479 319 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 CUTAO60888 179 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 GPR32O75388 356 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 EYA4O95677 639 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 PLA2G4BP0C869 781 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 SRGAP2CP0DJJ0 459 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 GPC3P51654 580 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 LPIN1Q14693 890 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 HYIQ5T013 277 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 ZNF365Q70YC5 407 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 RSPH3Q86UC2 560 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 PRPF31Q8WWY3 499 aaKnown RBP13.21□□□□□ -0.29
APTX-227ENST00000485479 BSNDQ8WZ55 320 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 DHX58Q96C10 678 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 FDXACB1Q9BRP7 624 aaPredicted RBP13.21□□□□□ -0.29
APTX-227ENST00000485479 KIFC3Q9BVG8 833 aa13.21□□□□□ -0.29
APTX-227ENST00000485479 POLR3FQ9H1D9 316 aaPredicted RBP13.21□□□□□ -0.29
APTX-227ENST00000485479 CXXC1Q9P0U4 656 aaPredicted RBP13.21□□□□□ -0.29
APTX-227ENST00000485479 DBR1Q9UK59 544 aaKnown RBP13.21□□□□□ -0.29
APTX-227ENST00000485479 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
APTX-227ENST00000485479 COLQQ9Y215 455 aaPredicted RBP13.21□□□□□ -0.29
APTX-227ENST00000485479 DGAT1O75907 488 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 TMOD1P28289 359 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 CD52P31358 61 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 SLC12A3P55017 1021 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 RBL2Q08999 1139 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 SHHQ15465 462 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 ATL3Q6DD88 541 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 RINT1Q6NUQ1 792 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 DBF4BQ8NFT6 615 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 CELF4Q9BZC1 486 aaKnown RBP13.2□□□□□ -0.3
APTX-227ENST00000485479 CCSER1Q9C0I3 900 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 NT5C3AQ9H0P0 336 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 GOLPH3LQ9H4A5 285 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 COL4A3BPQ9Y5P4 624 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 TRPV2Q9Y5S1 764 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 M0QZ92 97 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 CASP1P29466 404 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 TXLNAP40222 546 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 RFC5P40937 340 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 LAMTOR4Q0VGL1 99 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 NFX1Q12986 1120 aaKnown RBP13.2□□□□□ -0.3
APTX-227ENST00000485479 FBXO47Q5MNV8 452 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 IER5Q5VY09 327 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 RRAGBQ5VZM2 374 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 RNF149Q8NC42 400 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 LARP4BQ92615 738 aaKnown RBP13.2□□□□□ -0.3
APTX-227ENST00000485479 RAD54LQ92698 747 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 ADAMTS10Q9H324 1103 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 MINDY3Q9H8M7 445 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 USP20Q9Y2K6 914 aa13.2□□□□□ -0.3
APTX-227ENST00000485479 NOC2LQ9Y3T9 749 aaKnown RBP13.2□□□□□ -0.3
APTX-227ENST00000485479 ZBBXA8MT70 800 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 POLR2DO15514 142 aaKnown RBP13.19□□□□□ -0.3
APTX-227ENST00000485479 HIP1RO75146 1068 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 GLRA2P23416 452 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 STAT6P42226 847 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 PPIGQ13427 754 aaKnown RBP eCLIP13.19□□□□□ -0.3
APTX-227ENST00000485479 CAPSQ13938 189 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 ARSHQ5FYA8 562 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 TMEM240Q5SV17 173 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 RESP18Q5W5W9 173 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 FAM109BQ6ICB4 259 aaPredicted RBP13.19□□□□□ -0.3
APTX-227ENST00000485479 DYMQ7RTS9 669 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 GPBP1Q86WP2 473 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 GRAMD1CQ8IYS0 662 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
APTX-227ENST00000485479 IFIH1Q9BYX4 1025 aaKnown RBP13.19□□□□□ -0.3
APTX-227ENST00000485479 SCAND2PQ9GZW5 306 aaPredicted RBP13.19□□□□□ -0.3
APTX-227ENST00000485479 IL23AQ9NPF7 189 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 TRIOBPQ9H2D6 2365 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 CHD7Q9P2D1 2997 aa13.19□□□□□ -0.3
APTX-227ENST00000485479 XRCC6P12956 609 aaKnown RBP eCLIP13.18□□□□□ -0.3
APTX-227ENST00000485479 PFKFB1P16118 471 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 LIG1P18858 919 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 DNM2P50570 870 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 PRPF38BQ5VTL8 546 aaKnown RBP13.18□□□□□ -0.3
APTX-227ENST00000485479 C1orf186Q6ZWK4 172 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 RPAINQ86UA6 219 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 DAW1Q8N136 415 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 SYT2Q8N9I0 419 aaPredicted RBP13.18□□□□□ -0.3
APTX-227ENST00000485479 IFT122Q9HBG6 1241 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 CCDC39Q9UFE4 941 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 STK24Q9Y6E0 443 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 MORC2Q9Y6X9 1032 aaPredicted RBP13.18□□□□□ -0.3
APTX-227ENST00000485479 LRRIQ4A6NIV6 560 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 GADD45BO75293 160 aaPredicted RBP13.18□□□□□ -0.3
APTX-227ENST00000485479 CYP11B2P19099 503 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 MUTP22033 750 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 NDUFA8P51970 172 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 MAPK7Q13164 816 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 FAM26DQ5JW98 314 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 FAM228AQ86W67 206 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 FSIP1Q8NA03 581 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 REEP2Q9BRK0 252 aa13.18□□□□□ -0.3
APTX-227ENST00000485479 ZHX3Q9H4I2 956 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms