RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 CCDC66A2RUB6 948 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 FAM90A27PA6NNH2 459 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 B4E1Z4 1266 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 KRIT1O00522 736 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 GSTA4O15217 222 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 SMARCA5O60264 1052 aaPredicted RBP5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 CLASP2O75122 1294 aaKnown RBP5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 ZNF853P0CG23 659 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 HOXC9P31274 260 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 MASP1P48740 699 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 TARBP2Q15633 366 aaKnown RBP5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 MTHFSDQ2M296 383 aaKnown RBP5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 ALDH1L2Q3SY69 923 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 ARHGAP36Q6ZRI8 547 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 MCM10Q7L590 875 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 KRT28Q7Z3Y7 464 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 LRRTM3Q86VH5 581 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 FAM129CQ86XR2 697 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 THNSL2Q86YJ6 484 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 C1QL4Q86Z23 238 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 ITPRIPQ8IWB1 547 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 TRIM48Q8IWZ4 208 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 TMEM57Q8N5G2 664 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 C8orf58Q8NAV2 365 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 RTF1Q92541 710 aaKnown RBP5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 KCNJ15Q99712 375 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 AP5M1Q9H0R1 490 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 RWDD1Q9H446 243 aaPredicted RBP5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 BCAS3Q9H6U6 928 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 SIRT5Q9NXA8 310 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 MIS18AQ9NYP9 233 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 MYOTQ9UBF9 498 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 SMG5Q9UPR3 1016 aaKnown RBP5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 COQ6Q9Y2Z9 468 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 OVOS2A0A0J9YW53 1432 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 OVOS2Q6IE36 1432 aa5.31□□□□□ -1.56
TM9SF3-205ENST00000485093 SBNO1A3KN83 1393 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 RGPD8O14715 1765 aaPredicted RBP5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 LRRC7Q96NW7 1537 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 CBX4O00257 560 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 SLC27A2O14975 620 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 GLRX3O76003 335 aaKnown RBP5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 C4BPAP04003 597 aaKnown RBP5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 C8BP07358 591 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 SRGAP2CP0DJJ0 459 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 GNAT1P11488 350 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 TRIM27P14373 513 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 FAHP16930 419 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 POU3F3P20264 500 aaPredicted RBP5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 HSPA2P54652 639 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 TUSC3Q13454 348 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 MVPQ14764 893 aaKnown RBP5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 TWISTNBQ3B726 338 aaPredicted RBP5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 TMEM177Q53S58 311 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 PRR31Q5SQ13 230 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 CDCA2Q69YH5 1023 aaPredicted RBP5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 FSTL4Q6MZW2 842 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 TEPPQ6URK8 271 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 ATF7IPQ6VMQ6 1270 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 KCTD1Q719H9 257 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 RNF180Q86T96 592 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 ZC3H7AQ8IWR0 971 aaKnown RBP5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 RBM12BQ8IXT5 1001 aaKnown RBP5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 IGSF22Q8N9C0 903 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 DACT3Q96B18 629 aaPredicted RBP5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 MFSD3Q96ES6 412 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 PPP1R16BQ96T49 567 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 DTLQ9NZJ0 730 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 PCDHB4Q9Y5E5 795 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 B3GALT1Q9Y5Z6 326 aa5.3□□□□□ -1.56
TM9SF3-205ENST00000485093 FLT4P35916 1363 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 XRN1Q8IZH2 1706 aaKnown RBP5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 TOPAZ1Q8N9V7 1692 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 CHL1O00533 1208 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 DVL2O14641 736 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 BUB1BO60566 1050 aaPredicted RBP5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 MAFKO60675 156 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 LTFP02788 710 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 PLA2G1BP04054 148 aaKnown RBP5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 ATF3P18847 181 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 MC3RP41968 323 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 NCKAP1LP55160 1127 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 FOXO4P98177 505 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 SSPNQ14714 243 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 PCBP1Q15365 356 aaKnown RBP eCLIP5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 CRY1Q16526 586 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 C21orf62-AS1Q17RA5 79 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 KRT24Q2M2I5 525 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 FAM47CQ5HY64 1035 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 ATG14Q6ZNE5 492 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 NLGN4XQ8N0W4 816 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 FAM26EQ8N5C1 309 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 KCNH5Q8NCM2 988 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 IP6K1Q92551 441 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 ALG3Q92685 438 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 SIGLEC10Q96LC7 697 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 TARS2Q9BW92 718 aaKnown RBP5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 TMX1Q9H3N1 280 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 SAMD15Q9P1V8 674 aa5.29□□□□□ -1.56
TM9SF3-205ENST00000485093 B4GALT6Q9UBX8 382 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms