RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 NT5C3AQ9H0P0 336 aa10.05□□□□□ -0.8
USP16-206ENST00000485067 FAM198AQ9UFP1 575 aa10.05□□□□□ -0.8
USP16-206ENST00000485067 KDM3AQ9Y4C1 1321 aa10.05□□□□□ -0.8
USP16-206ENST00000485067 ARFGEF1Q9Y6D6 1849 aa10.05□□□□□ -0.8
USP16-206ENST00000485067 H0YIN7 160 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 SLC37A4O43826 429 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 TDP2O95551 362 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 PNMA6AP0CW24 399 aaPredicted RBP10.04□□□□□ -0.8
USP16-206ENST00000485067 TNNI2P48788 182 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 CLCN2P51788 898 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 BRD3Q15059 726 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 CNGA3Q16281 694 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 SLC15A2Q16348 729 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 ALKBH2Q6NS38 261 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 HOOK3Q86VS8 718 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 SLC35F6Q8N357 371 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 KIAA0895Q8NCT3 520 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 SNX29Q8TEQ0 813 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 C7orf43Q8WVR3 580 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 GJA10Q969M2 543 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 CLIP3Q96DZ5 547 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 SAAL1Q96ER3 474 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 RUFY1Q96T51 708 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 MPHOSPH6Q99547 160 aaKnown RBP10.04□□□□□ -0.8
USP16-206ENST00000485067 PSTPIP2Q9H939 334 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 SPC25Q9HBM1 224 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 DDX25Q9UHL0 483 aaKnown RBP10.04□□□□□ -0.8
USP16-206ENST00000485067 CCDC151A5D8V7 595 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 MYMKA6NI61 221 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 CEP104O60308 925 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 B3GALNT1O75752 331 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 FCER1AP12319 257 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 SNAP25P60880 206 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 RRP1BQ14684 758 aaKnown RBP10.04□□□□□ -0.8
USP16-206ENST00000485067 MIIPQ5JXC2 388 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 HYIQ5T013 277 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 EGFLAMQ63HQ2 1017 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 PHLDB3Q6NSJ2 640 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 ARHGAP27Q6ZUM4 889 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 ARHGAP22Q7Z5H3 698 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 DEFB132Q7Z7B7 95 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 CCDC84Q86UT8 332 aaPredicted RBP10.04□□□□□ -0.8
USP16-206ENST00000485067 CAMKK2Q96RR4 588 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 CHP1Q99653 195 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 TSG101Q99816 390 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 CORO1BQ9BR76 489 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 TCHPQ9BT92 498 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 BEGAINQ9BUH8 593 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 C2orf49Q9BVC5 232 aaPredicted RBP10.04□□□□□ -0.8
USP16-206ENST00000485067 TRIM4Q9C037 500 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 ARFGAP3Q9NP61 516 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 NYAP2Q9P242 653 aa10.04□□□□□ -0.8
USP16-206ENST00000485067 COL4A5P29400 1685 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 PSMD14O00487 310 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 KIF11P52732 1056 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 CTAG1AP78358 180 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 MYBPC3Q14896 1274 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 UBE2SQ16763 222 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 Q4G0T1 1027 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 SPDYCQ5MJ68 293 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 CFAP58Q5T655 872 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 WDR59Q6PJI9 974 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 MOXD1Q6UVY6 613 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 HNRNPLLQ8WVV9 542 aaKnown RBP10.03□□□□□ -0.8
USP16-206ENST00000485067 SPIRE2Q8WWL2 714 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 IDI2Q9BXS1 227 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 PARD6BQ9BYG5 372 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 SEMA6BQ9H3T3 888 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 TDRD3Q9H7E2 651 aaKnown RBP10.03□□□□□ -0.8
USP16-206ENST00000485067 KANSL2Q9H9L4 492 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 SLC39A2Q9NP94 309 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 BMP2KQ9NSY1 1161 aaPredicted RBP10.03□□□□□ -0.8
USP16-206ENST00000485067 PI4KBQ9UBF8 816 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 TBK1Q9UHD2 729 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 PCSK1NQ9UHG2 260 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 SSX2IPQ9Y2D8 614 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 USP17L10C9JJH3 530 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 PDLIM1O00151 329 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 KRT86O43790 486 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 GDF11O95390 407 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 CCNCP24863 283 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 HNRNPH3P31942 346 aaKnown RBP10.03□□□□□ -0.8
USP16-206ENST00000485067 EHHADHQ08426 723 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 PABPC4Q13310 644 aaKnown RBP eCLIP10.03□□□□□ -0.82e-11■■■■■ 76.6
USP16-206ENST00000485067 MAN2A1Q16706 1144 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 VWA3BQ502W6 1294 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 STRIP1Q5VSL9 837 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 CDCA2Q69YH5 1023 aaPredicted RBP10.03□□□□□ -0.8
USP16-206ENST00000485067 SIAH1Q8IUQ4 282 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 TMUB1Q9BVT8 246 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 EDEM3Q9BZQ6 932 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.03□□□□□ -0.8
USP16-206ENST00000485067 XPO7Q9UIA9 1087 aaKnown RBP10.03□□□□□ -0.8
USP16-206ENST00000485067 PCDHA12Q9UN75 941 aa10.03□□□□□ -0.8
USP16-206ENST00000485067 SCAF8Q9UPN6 1271 aaKnown RBP10.03□□□□□ -0.8
USP16-206ENST00000485067 GNEQ9Y223 722 aaKnown RBP10.03□□□□□ -0.8
USP16-206ENST00000485067 REXO2Q9Y3B8 237 aaKnown RBP10.03□□□□□ -0.8
USP16-206ENST00000485067 CYP3A7-CYP3A51PA0A087WV96 503 aa10.02□□□□□ -0.81
USP16-206ENST00000485067 A0A0U1RQJ8 604 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms