RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 DKC1O60832 514 aaKnown RBP eCLIP13.74□□□□□ -0.21
MSH5-216ENST00000484309 SLITRK3O94933 977 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 POLGP54098 1239 aaPredicted RBP13.74□□□□□ -0.21
MSH5-216ENST00000484309 BTG3Q14201 252 aaPredicted RBP13.74□□□□□ -0.21
MSH5-216ENST00000484309 EPC2Q52LR7 807 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 XKR9Q5GH70 373 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 MCTP1Q6DN14 999 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 RHPN2Q8IUC4 686 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 NPAS4Q8IUM7 802 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 C4orf19Q8IY42 314 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 TMEM143Q96AN5 459 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 FDXACB1Q9BRP7 624 aaPredicted RBP13.74□□□□□ -0.21
MSH5-216ENST00000484309 BACH2Q9BYV9 841 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 ZSWIM4Q9H7M6 989 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 LRFN2Q9ULH4 789 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 NOL7Q9UMY1 257 aaKnown RBP13.74□□□□□ -0.21
MSH5-216ENST00000484309 PRUNE2Q8WUY3 3088 aa13.74□□□□□ -0.21
MSH5-216ENST00000484309 REV3LO60673 3130 aa13.73□□□□□ -0.21
MSH5-216ENST00000484309 DGKIO75912 1065 aa13.73□□□□□ -0.21
MSH5-216ENST00000484309 CSPG5O95196 566 aa13.73□□□□□ -0.21
MSH5-216ENST00000484309 OR52Z1P0C646 297 aa13.73□□□□□ -0.21
MSH5-216ENST00000484309 STAG3L1P0CL83 205 aa13.73□□□□□ -0.21
MSH5-216ENST00000484309 DARSP14868 501 aaKnown RBP13.73□□□□□ -0.21
MSH5-216ENST00000484309 EIF4BP23588 611 aaKnown RBP13.73□□□□□ -0.21
MSH5-216ENST00000484309 CTNNB1P35222 781 aa13.73□□□□□ -0.21
MSH5-216ENST00000484309 TECP42680 631 aa13.73□□□□□ -0.21
MSH5-216ENST00000484309 SARSP49591 514 aaKnown RBP13.73□□□□□ -0.21
MSH5-216ENST00000484309 DNM2P50570 870 aa13.73□□□□□ -0.21
MSH5-216ENST00000484309 SKIV2LQ15477 1246 aaKnown RBP13.73□□□□□ -0.21
MSH5-216ENST00000484309 ODR4Q5SWX8 454 aa13.73□□□□□ -0.21
MSH5-216ENST00000484309 TMEM192Q8IY95 271 aa13.73□□□□□ -0.21
MSH5-216ENST00000484309 ZNF689Q96CS4 500 aaPredicted RBP13.73□□□□□ -0.21
MSH5-216ENST00000484309 NLRP4Q96MN2 994 aa13.73□□□□□ -0.21
MSH5-216ENST00000484309 C9IYK1 514 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 U2AF2P26368 475 aaKnown RBP eCLIP13.72□□□□□ -0.219e-9■■■■□ 22.4
MSH5-216ENST00000484309 MCM2P49736 904 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 TOB1P50616 345 aaPredicted RBP13.72□□□□□ -0.21
MSH5-216ENST00000484309 GPM6BQ13491 265 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 DSC3Q14574 896 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 EMC2Q15006 297 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 OTUD6AQ7L8S5 288 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 CRIPAKQ8N1N5 446 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 PIGOQ8TEQ8 1089 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 SLC7A3Q8WY07 619 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 CCDC43Q96MW1 224 aaKnown RBP13.72□□□□□ -0.21
MSH5-216ENST00000484309 HSD17B14Q9BPX1 270 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 GCOM2Q9BZD3 368 aaPredicted RBP13.72□□□□□ -0.21
MSH5-216ENST00000484309 DHX33Q9H6R0 707 aaKnown RBP13.72□□□□□ -0.21
MSH5-216ENST00000484309 RGS18Q9NS28 235 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 SMC3Q9UQE7 1217 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 KIF3AQ9Y496 699 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 PCDHB7Q9Y5E2 793 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 PCDHB6Q9Y5E3 794 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 MRPL42Q9Y6G3 142 aaKnown RBP13.72□□□□□ -0.21
MSH5-216ENST00000484309 MYH11P35749 1972 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 UNC80Q8N2C7 3258 aa13.72□□□□□ -0.21
MSH5-216ENST00000484309 H3BQV1 296 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 MED24O75448 989 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 LINC00271P0C7V0 271 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 FGFR1P11362 822 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 POU3F3P20264 500 aaPredicted RBP13.71□□□□□ -0.21
MSH5-216ENST00000484309 RFC5P40937 340 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 FAM102BQ5T8I3 360 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 SLC24A5Q71RS6 500 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 RNF169Q8NCN4 708 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 NEK9Q8TD19 979 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 SAMD11Q96NU1 681 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 MTRQ99707 1265 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 JPH2Q9BR39 696 aaPredicted RBP13.71□□□□□ -0.21
MSH5-216ENST00000484309 XPNPEP1Q9NQW7 623 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 C1orf112Q9NSG2 853 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 HCSTQ9UBK5 93 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 COL4A3BPQ9Y5P4 624 aa13.71□□□□□ -0.21
MSH5-216ENST00000484309 MYH15Q9Y2K3 1946 aa13.7□□□□□ -0.22
MSH5-216ENST00000484309 TBKBP1A7MCY6 615 aa13.7□□□□□ -0.22
MSH5-216ENST00000484309 SRGAP2CP0DJJ0 459 aa13.7□□□□□ -0.22
MSH5-216ENST00000484309 SPATA31C1P0DKV0 1188 aa13.7□□□□□ -0.22
MSH5-216ENST00000484309 ZSCAN20P17040 1043 aaPredicted RBP13.7□□□□□ -0.22
MSH5-216ENST00000484309 TRAPPC10P48553 1259 aa13.7□□□□□ -0.22
MSH5-216ENST00000484309 ORC2Q13416 577 aaPredicted RBP13.7□□□□□ -0.22
MSH5-216ENST00000484309 POTEGQ6S5H5 508 aa13.7□□□□□ -0.22
MSH5-216ENST00000484309 ZNF410Q86VK4 478 aa13.7□□□□□ -0.22
MSH5-216ENST00000484309 CATSPER3Q86XQ3 398 aa13.7□□□□□ -0.22
MSH5-216ENST00000484309 CMTR2Q8IYT2 770 aaKnown RBP13.7□□□□□ -0.22
MSH5-216ENST00000484309 C4orf32Q8N8J7 132 aa13.7□□□□□ -0.22
MSH5-216ENST00000484309 PRPF31Q8WWY3 499 aaKnown RBP13.7□□□□□ -0.22
MSH5-216ENST00000484309 THEGQ9P2T0 379 aa13.7□□□□□ -0.22
MSH5-216ENST00000484309 CUL9Q8IWT3 2517 aa13.7□□□□□ -0.22
MSH5-216ENST00000484309 TDRD15B5MCY1 1934 aaKnown RBP13.69□□□□□ -0.22
MSH5-216ENST00000484309 H3BNC9 293 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 USO1O60763 962 aaKnown RBP13.69□□□□□ -0.22
MSH5-216ENST00000484309 LYPLA2O95372 231 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 SFPQP23246 707 aaKnown RBP eCLIP13.69□□□□□ -0.22
MSH5-216ENST00000484309 BMPR1AP36894 532 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 TFF2Q03403 129 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 LAMTOR4Q0VGL1 99 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 PTGDRQ13258 359 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 MAEAQ7L5Y9 396 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 CATSPER4Q7RTX7 472 aa13.69□□□□□ -0.22
MSH5-216ENST00000484309 ZNF710Q8N1W2 664 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms