RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 GUCY2CP25092 1073 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 CCND2P30279 289 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 ICAM3P32942 547 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 IRS1P35568 1242 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 DNM2P50570 870 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 JAK3P52333 1124 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 STX17P56962 302 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 MRPS9P82933 396 aaKnown RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 FKBP3Q00688 224 aaKnown RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 KRT76Q01546 638 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 MTMR1Q13613 665 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 BAATQ14032 418 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 TRIM14Q14142 442 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 KCNJ12Q14500 433 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 KRT31Q15323 416 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 EDRF1Q3B7T1 1238 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 LEXMQ3ZCV2 418 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 HERC4Q5GLZ8 1057 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 TMEM240Q5SV17 173 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 C1orf53Q5VUE5 145 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 ARHGEF16Q5VV41 709 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 NCAPH2Q6IBW4 605 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 SNRNP48Q6IEG0 339 aaKnown RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 PTCRAQ6ISU1 281 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 RINT1Q6NUQ1 792 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 GADL1Q6ZQY3 521 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 C1orf186Q6ZWK4 172 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 TMC6Q7Z403 805 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 FILIP1Q7Z7B0 1213 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 GPBP1Q86WP2 473 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 SMYD4Q8IYR2 804 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 MYOCDQ8IZQ8 938 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 CSGALNACT2Q8N6G5 542 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 RETREG2Q8NC44 543 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 ARRDC4Q8NCT1 418 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 KIAA0895Q8NCT3 520 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 GTF3C2Q8WUA4 911 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 GJA10Q969M2 543 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 CEP63Q96MT8 703 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 ZNF830Q96NB3 372 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 INPP4AQ96PE3 977 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 PANX2Q96RD6 677 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 TSG101Q99816 390 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 DUSP9Q99956 384 aaKnown RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 NUP58Q9BVL2 599 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 TIPINQ9BVW5 301 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 NAA15Q9BXJ9 866 aaKnown RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 SRRTQ9BXP5 876 aaKnown RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 ZSWIM4Q9H7M6 989 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 ALG13Q9NP73 1137 aaKnown RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 OLFML3Q9NRN5 406 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 TMEM39AQ9NV64 488 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 CYP39A1Q9NYL5 469 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 MAGEC2Q9UBF1 373 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 SEL1LQ9UBV2 794 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 DDX20Q9UHI6 824 aaKnown RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 KCNG1Q9UIX4 513 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 ODF2LQ9ULJ1 636 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 CTNND2Q9UQB3 1225 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 TRAF3IP3Q9Y228 551 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 RIPK3Q9Y572 518 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 COL4A3BPQ9Y5P4 624 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 MYO15AQ9UKN7 3530 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 ZNF292O60281 2723 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 DNAH14Q0VDD8 3507 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 NFASCO94856 1347 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 SMCHD1A6NHR9 2005 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 ACACBO00763 2458 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 RLFQ13129 1914 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 PHIPQ8WWQ0 1821 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 SPATA31C2B4DYI2 1134 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 PDXKO00764 312 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 N4BP3O15049 544 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 CCP110O43303 1012 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 TGFB3P10600 412 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 FCER1AP12319 257 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 IDEP14735 1019 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 SCP2P22307 547 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 CNGA1P29973 690 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 NBL1P41271 181 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 QARSP47897 775 aaKnown RBP5.98□□□□□ -1.45
COL17A1-206ENST00000483876 ZNF131P52739 623 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 COPB1P53618 953 aaKnown RBP5.98□□□□□ -1.45
COL17A1-206ENST00000483876 PMS1P54277 932 aaKnown RBP5.98□□□□□ -1.45
COL17A1-206ENST00000483876 MARSP56192 900 aaKnown RBP5.98□□□□□ -1.45
COL17A1-206ENST00000483876 PSMC6P62333 389 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 CCZ1BP86790 482 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 CCZ1P86791 482 aaPredicted RBP5.98□□□□□ -1.45
COL17A1-206ENST00000483876 COASYQ13057 564 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 MYBPC2Q14324 1141 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 ARID5BQ14865 1188 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 NFIL3Q16649 462 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 BMT2Q1RMZ1 405 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 GNPTABQ3T906 1256 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 ZCWPW2Q504Y3 356 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 FIGNQ5HY92 759 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 FAM26FQ5R3K3 315 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 ZNF746Q6NUN9 644 aaPredicted RBP5.98□□□□□ -1.45
COL17A1-206ENST00000483876 ARMCX5Q6P1M9 558 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms