RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 TMEM265A0A087WTH1 108 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 PP2D1A8MPX8 630 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 PPP6R2O75170 966 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 EYA4O95677 639 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 BRD1O95696 1058 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 CD52P31358 61 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 POU5F1BQ06416 359 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 DRP2Q13474 957 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 STK38Q15208 465 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 PADI6Q6TGC4 694 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 CABP7Q86V35 215 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 RHPN2Q8IUC4 686 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 NLRP7Q8WX94 980 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 OSMRQ99650 979 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 CCSER1Q9C0I3 900 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 AGO3Q9H9G7 860 aaKnown RBP17.36■□□□□ 0.37
RPP40-206ENST00000483546 XPNPEP1Q9NQW7 623 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
RPP40-206ENST00000483546 FBXO2Q9UK22 296 aaPredicted RBP17.36■□□□□ 0.37
RPP40-206ENST00000483546 CFAP45Q9UL16 551 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 PADI3Q9ULW8 664 aa17.36■□□□□ 0.37
RPP40-206ENST00000483546 TTC3P53804 2025 aa17.35■□□□□ 0.37
RPP40-206ENST00000483546 DARSP14868 501 aaKnown RBP17.35■□□□□ 0.37
RPP40-206ENST00000483546 CYP11B2P19099 503 aa17.35■□□□□ 0.37
RPP40-206ENST00000483546 PKP1Q13835 747 aa17.35■□□□□ 0.37
RPP40-206ENST00000483546 TFDP1Q14186 410 aa17.35■□□□□ 0.37
RPP40-206ENST00000483546 PCBP1Q15365 356 aaKnown RBP eCLIP17.35■□□□□ 0.37
RPP40-206ENST00000483546 ECM1Q16610 540 aa17.35■□□□□ 0.37
RPP40-206ENST00000483546 KRI1Q8N9T8 703 aaKnown RBP17.35■□□□□ 0.37
RPP40-206ENST00000483546 LINC00301Q8NCQ3 95 aa17.35■□□□□ 0.37
RPP40-206ENST00000483546 TMEM40Q8WWA1 233 aa17.35■□□□□ 0.37
RPP40-206ENST00000483546 PRPF31Q8WWY3 499 aaKnown RBP17.35■□□□□ 0.37
RPP40-206ENST00000483546 TMEM143Q96AN5 459 aa17.35■□□□□ 0.37
RPP40-206ENST00000483546 OSBPL7Q9BZF2 842 aa17.35■□□□□ 0.37
RPP40-206ENST00000483546 BHMT2Q9H2M3 363 aa17.35■□□□□ 0.37
RPP40-206ENST00000483546 CDHR5Q9HBB8 845 aa17.35■□□□□ 0.37
RPP40-206ENST00000483546 ERVK-5Q9HDB9 667 aa17.35■□□□□ 0.37
RPP40-206ENST00000483546 NOC2LQ9Y3T9 749 aaKnown RBP17.35■□□□□ 0.37
RPP40-206ENST00000483546 PCDHA11Q9Y5I1 949 aa17.35■□□□□ 0.37
RPP40-206ENST00000483546 SOX1O00570 391 aaPredicted RBP17.34■□□□□ 0.37
RPP40-206ENST00000483546 USO1O60763 962 aaKnown RBP17.34■□□□□ 0.37
RPP40-206ENST00000483546 SFPQP23246 707 aaKnown RBP eCLIP17.34■□□□□ 0.37
RPP40-206ENST00000483546 MARCKSP29966 332 aaPredicted RBP17.34■□□□□ 0.37
RPP40-206ENST00000483546 CDC25AP30304 524 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 ARL2P36404 184 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 TXLNAP40222 546 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 CEBPZQ03701 1054 aaKnown RBP17.34■□□□□ 0.37
RPP40-206ENST00000483546 LAMTOR4Q0VGL1 99 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 TCTN1Q2MV58 587 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 TMEM119Q4V9L6 283 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 FAM109BQ6ICB4 259 aaPredicted RBP17.34■□□□□ 0.37
RPP40-206ENST00000483546 PPP4R3CPQ6ZMV5 832 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 SRGAP1Q7Z6B7 1085 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 FAM228AQ86W67 206 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 HERC6Q8IVU3 1022 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 TIPINQ9BVW5 301 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 TSPYL2Q9H2G4 693 aaPredicted RBP17.34■□□□□ 0.37
RPP40-206ENST00000483546 KCND2Q9NZV8 630 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 MSRAQ9UJ68 235 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 ST3GAL5Q9UNP4 418 aa17.34■□□□□ 0.37
RPP40-206ENST00000483546 A0A087WZ62 844 aa17.33■□□□□ 0.36
RPP40-206ENST00000483546 SPTLC2O15270 562 aa17.33■□□□□ 0.36
RPP40-206ENST00000483546 PHKA2P46019 1235 aa17.33■□□□□ 0.36
RPP40-206ENST00000483546 NUCB2P80303 420 aa17.33■□□□□ 0.36
RPP40-206ENST00000483546 NFX1Q12986 1120 aaKnown RBP17.33■□□□□ 0.36
RPP40-206ENST00000483546 GRB10Q13322 594 aa17.33■□□□□ 0.36
RPP40-206ENST00000483546 FOXD4L5Q5VV16 416 aaPredicted RBP17.33■□□□□ 0.36
RPP40-206ENST00000483546 IFNLR1Q8IU57 520 aaPredicted RBP17.33■□□□□ 0.36
RPP40-206ENST00000483546 KCNG4Q8TDN1 519 aa17.33■□□□□ 0.36
RPP40-206ENST00000483546 FOXD4L4Q8WXT5 416 aaPredicted RBP17.33■□□□□ 0.36
RPP40-206ENST00000483546 NLRP4Q96MN2 994 aa17.33■□□□□ 0.36
RPP40-206ENST00000483546 PNMA5Q96PV4 448 aa17.33■□□□□ 0.36
RPP40-206ENST00000483546 PPP1R16BQ96T49 567 aa17.33■□□□□ 0.36
RPP40-206ENST00000483546 FDXACB1Q9BRP7 624 aaPredicted RBP17.33■□□□□ 0.36
RPP40-206ENST00000483546 NFKBIZQ9BYH8 718 aa17.33■□□□□ 0.36
RPP40-206ENST00000483546 CSRNP2Q9H175 543 aa17.33■□□□□ 0.36
RPP40-206ENST00000483546 C1orf112Q9NSG2 853 aa17.33■□□□□ 0.36
RPP40-206ENST00000483546 CCDC39Q9UFE4 941 aa17.33■□□□□ 0.36
RPP40-206ENST00000483546 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.32■□□□□ 0.36
RPP40-206ENST00000483546 E9PMD0 336 aa17.32■□□□□ 0.36
RPP40-206ENST00000483546 ENPP3O14638 875 aa17.32■□□□□ 0.36
RPP40-206ENST00000483546 GJB5O95377 273 aa17.32■□□□□ 0.36
RPP40-206ENST00000483546 DNAJB2P25686 324 aa17.32■□□□□ 0.36
RPP40-206ENST00000483546 DEFB103AP81534 67 aa17.32■□□□□ 0.36
RPP40-206ENST00000483546 PPP2R5AQ15172 486 aa17.32■□□□□ 0.36
RPP40-206ENST00000483546 SYT2Q8N9I0 419 aaPredicted RBP17.32■□□□□ 0.36
RPP40-206ENST00000483546 RASSF8Q8NHQ8 419 aa17.32■□□□□ 0.36
RPP40-206ENST00000483546 KIFAP3Q92845 792 aa17.32■□□□□ 0.36
RPP40-206ENST00000483546 TOP1MTQ969P6 601 aa17.32■□□□□ 0.36
RPP40-206ENST00000483546 PBX4Q9BYU1 374 aa17.32■□□□□ 0.36
RPP40-206ENST00000483546 POLR3FQ9H1D9 316 aaPredicted RBP17.32■□□□□ 0.36
RPP40-206ENST00000483546 IFT122Q9HBG6 1241 aa17.32■□□□□ 0.36
RPP40-206ENST00000483546 CHST12Q9NRB3 414 aa17.32■□□□□ 0.36
RPP40-206ENST00000483546 BMP2KQ9NSY1 1161 aaPredicted RBP17.32■□□□□ 0.36
RPP40-206ENST00000483546 DAXXQ9UER7 740 aaPredicted RBP17.32■□□□□ 0.36
RPP40-206ENST00000483546 COL4A6Q14031 1691 aa17.32■□□□□ 0.36
RPP40-206ENST00000483546 MYH11P35749 1972 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 LAMA3Q16787 3333 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 A0A087WWV3 80 aa17.31■□□□□ 0.36
RPP40-206ENST00000483546 ZSCAN20P17040 1043 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms