RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 EPAS1Q99814 870 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 FGFBP2Q9BYJ0 223 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 WDR35Q9P2L0 1181 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.78□□□□□ -0.36
VTI1A-205ENST00000483122 RREB1Q92766 1687 aa12.77□□□□□ -0.36
VTI1A-205ENST00000483122 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.36
VTI1A-205ENST00000483122 FAM170AA1A519 330 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 RASGRF2O14827 1237 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 KIAA0391O15091 583 aaKnown RBP12.77□□□□□ -0.37
VTI1A-205ENST00000483122 TPBGLP0DKB5 382 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 CALB2P22676 271 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 ALDH3A1P30838 453 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 RFC5P40937 340 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 KIAA1755Q5JYT7 1200 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 RNF220Q5VTB9 566 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 JAMLQ86YT9 394 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 TRIM59Q8IWR1 403 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 ANKRD42Q8N9B4 389 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 GDAP1Q8TB36 358 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 ZFAND2BQ8WV99 257 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 CRAMP1Q96RY5 1269 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 RIC8AQ9NPQ8 531 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 GRHL1Q9NZI5 618 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 TRMT112Q9UI30 125 aaKnown RBP12.77□□□□□ -0.37
VTI1A-205ENST00000483122 CICQ96RK0 1608 aaPredicted RBP12.77□□□□□ -0.37
VTI1A-205ENST00000483122 O00370 1275 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 SLC9A1P19634 815 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 SP100P23497 879 aaPredicted RBP12.77□□□□□ -0.37
VTI1A-205ENST00000483122 TXKP42681 527 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 PEX5P50542 639 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 ZNF211Q13398 564 aaPredicted RBP12.77□□□□□ -0.37
VTI1A-205ENST00000483122 LBRQ14739 615 aaKnown RBP12.77□□□□□ -0.37
VTI1A-205ENST00000483122 MYOCDQ8IZQ8 938 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 PROM2Q8N271 834 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 DAGLBQ8NCG7 672 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 B4GALNT2Q8NHY0 566 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 DDX12PQ92771 950 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 FAM210AQ96ND0 272 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 TBC1D7Q9P0N9 293 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 AMFRQ9UKV5 643 aa12.77□□□□□ -0.37
VTI1A-205ENST00000483122 BTAF1O14981 1849 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 TMEM120BA0PK00 339 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 DDX3YO15523 660 aaKnown RBP12.76□□□□□ -0.37
VTI1A-205ENST00000483122 PDE8AO60658 829 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 UNC5CO95185 931 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 CYP2D6P10635 497 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 CNGA1P29973 690 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 SGSM1Q2NKQ1 1148 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 VSTM1Q6UX27 236 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 TAOK1Q7L7X3 1001 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 KCNK18Q7Z418 384 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 ECHDC2Q86YB7 292 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 NELFCDQ8IXH7 590 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 PHC3Q8NDX5 983 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 RBM46Q8TBY0 533 aaKnown RBP12.76□□□□□ -0.37
VTI1A-205ENST00000483122 STK32AQ8WU08 396 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 GORASP1Q9BQQ3 440 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 TRIM7Q9C029 511 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 OSGEPQ9NPF4 335 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 CYP39A1Q9NYL5 469 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 RGL1Q9NZL6 768 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 DLGAP2Q9P1A6 1054 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 CNOT7Q9UIV1 285 aaKnown RBP12.76□□□□□ -0.37
VTI1A-205ENST00000483122 MTMR7Q9Y216 660 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 H0Y3Z8 333 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 RIPK2O43353 540 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 CYTH3O43739 400 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 GH1P01241 217 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 RPL21P46778 160 aaKnown RBP12.76□□□□□ -0.37
VTI1A-205ENST00000483122 DPY19L2P1Q6NXN4 242 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 BTNL9Q6UXG8 535 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 NBPF5PQ86XG9 351 aaPredicted RBP12.76□□□□□ -0.37
VTI1A-205ENST00000483122 RPUSD2Q8IZ73 545 aaKnown RBP12.76□□□□□ -0.37
VTI1A-205ENST00000483122 SUPT20HQ8NEM7 779 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 PIGOQ8TEQ8 1089 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 RAB3IPQ96QF0 476 aaPredicted RBP12.76□□□□□ -0.37
VTI1A-205ENST00000483122 NUDT12Q9BQG2 462 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 TMEM109Q9BVC6 243 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 BRIP1Q9BX63 1249 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 TRIM4Q9C037 500 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 PPP1R9AQ9ULJ8 1098 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 NENFQ9UMX5 172 aa12.76□□□□□ -0.37
VTI1A-205ENST00000483122 ABLIM1O14639 778 aa12.75□□□□□ -0.37
VTI1A-205ENST00000483122 H2AFZP0C0S5 128 aa12.75□□□□□ -0.37
VTI1A-205ENST00000483122 KLC1Q07866 573 aa12.75□□□□□ -0.37
VTI1A-205ENST00000483122 KCNH2Q12809 1159 aa12.75□□□□□ -0.37
VTI1A-205ENST00000483122 LONRF1Q17RB8 773 aa12.75□□□□□ -0.37
VTI1A-205ENST00000483122 SLC4A8Q2Y0W8 1093 aa12.75□□□□□ -0.37
VTI1A-205ENST00000483122 AADACL2Q6P093 401 aa12.75□□□□□ -0.37
VTI1A-205ENST00000483122 H2AFVQ71UI9 128 aa12.75□□□□□ -0.37
VTI1A-205ENST00000483122 LONP2Q86WA8 852 aa12.75□□□□□ -0.37
VTI1A-205ENST00000483122 TTC8Q8TAM2 541 aa12.75□□□□□ -0.37
VTI1A-205ENST00000483122 UCMAQ8WVF2 138 aa12.75□□□□□ -0.37
VTI1A-205ENST00000483122 TMEM237Q96Q45 408 aa12.75□□□□□ -0.37
VTI1A-205ENST00000483122 AJAP1Q9UKB5 411 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-205ENST00000483122 TTC7AQ9ULT0 858 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-205ENST00000483122 ATAD5Q96QE3 1844 aa12.75□□□□□ -0.37
VTI1A-205ENST00000483122 FAM187AA6NFU0 413 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 SKIV2L2P42285 1042 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms