RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 DGAT1O75907 488 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 F13A1P00488 732 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 AMHP03971 560 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 CDC25AP30304 524 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 GPC3P51654 580 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 DEFB103AP81534 67 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 CDC42EP1Q00587 391 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 NFX1Q12986 1120 aaKnown RBP9.77□□□□□ -0.85
SNX4-205ENST00000482965 ZRSR1Q15695 479 aaKnown RBP9.77□□□□□ -0.85
SNX4-205ENST00000482965 RAB30Q15771 203 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 RHPN2Q8IUC4 686 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 MYOCDQ8IZQ8 938 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 PHOSPHO2Q8TCD6 241 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 TMEM40Q8WWA1 233 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 PSPC1Q8WXF1 523 aaKnown RBP9.77□□□□□ -0.85
SNX4-205ENST00000482965 TMEM143Q96AN5 459 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 CDK5RAP3Q96JB5 506 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 NLRP4Q96MN2 994 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 ZNF396Q96N95 335 aaPredicted RBP9.77□□□□□ -0.85
SNX4-205ENST00000482965 USP28Q96RU2 1077 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 ADAMTS10Q9H324 1103 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 ATP6V0A4Q9HBG4 840 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 DDX19AQ9NUU7 478 aaKnown RBP9.77□□□□□ -0.85
SNX4-205ENST00000482965 MSRAQ9UJ68 235 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 DBR1Q9UK59 544 aaKnown RBP9.77□□□□□ -0.85
SNX4-205ENST00000482965 PADI3Q9ULW8 664 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 KIAA1024Q9UPX6 916 aa9.77□□□□□ -0.85
SNX4-205ENST00000482965 NOC2LQ9Y3T9 749 aaKnown RBP9.77□□□□□ -0.85
SNX4-205ENST00000482965 MYH11P35749 1972 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 A0A087WZ62 844 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 GPR182O15218 404 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 EIF4BP23588 611 aaKnown RBP9.76□□□□□ -0.85
SNX4-205ENST00000482965 DNAJB2P25686 324 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 MARCKSP29966 332 aaPredicted RBP9.76□□□□□ -0.85
SNX4-205ENST00000482965 LONP1P36776 959 aaKnown RBP9.76□□□□□ -0.85
SNX4-205ENST00000482965 PBX2P40425 430 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 RABGGTBP53611 331 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 STK38Q15208 465 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 PTPAQ15257 358 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 ECM1Q16610 540 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 GPR153Q6NV75 609 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 FAM117BQ6P1L5 589 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNX4-205ENST00000482965 CABP7Q86V35 215 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 ZNF410Q86VK4 478 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 FAM228AQ86W67 206 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 HERC6Q8IVU3 1022 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 PRPF31Q8WWY3 499 aaKnown RBP9.76□□□□□ -0.85
SNX4-205ENST00000482965 TIFAQ96CG3 184 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 AK8Q96MA6 479 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 FDXACB1Q9BRP7 624 aaPredicted RBP9.76□□□□□ -0.85
SNX4-205ENST00000482965 ZBED2Q9BTP6 218 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 MMTAG2Q9BU76 263 aaKnown RBP9.76□□□□□ -0.85
SNX4-205ENST00000482965 FTHL17Q9BXU8 183 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 PBX4Q9BYU1 374 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 GCOM2Q9BZD3 368 aaPredicted RBP9.76□□□□□ -0.85
SNX4-205ENST00000482965 ERVK-5Q9HDB9 667 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 XPNPEP1Q9NQW7 623 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 ST3GAL5Q9UNP4 418 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 DNM3Q9UQ16 869 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 PCDHA11Q9Y5I1 949 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 COL4A3BPQ9Y5P4 624 aa9.76□□□□□ -0.85
SNX4-205ENST00000482965 RANBP2P49792 3224 aaKnown RBP9.76□□□□□ -0.85
SNX4-205ENST00000482965 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.75□□□□□ -0.85
SNX4-205ENST00000482965 E9PMD0 336 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 ENPP3O14638 875 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 ASAP2O43150 1006 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 TLL1O43897 1013 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 UPP2O95045 317 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 EYA4O95677 639 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 SRGAP2CP0DJJ0 459 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 DARSP14868 501 aaKnown RBP9.75□□□□□ -0.85
SNX4-205ENST00000482965 CD44P16070 742 aaKnown RBP9.75□□□□□ -0.85
SNX4-205ENST00000482965 UBA7P41226 1012 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 GRIN1Q05586 938 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 LAMTOR4Q0VGL1 99 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 PKP1Q13835 747 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 FOXD4L6Q3SYB3 417 aaPredicted RBP9.75□□□□□ -0.85
SNX4-205ENST00000482965 ZNF697Q5TEC3 545 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 PADI6Q6TGC4 694 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 FOXD4L3Q6VB84 417 aaPredicted RBP9.75□□□□□ -0.85
SNX4-205ENST00000482965 MAEAQ7L5Y9 396 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 TMCO2Q7Z6W1 182 aaPredicted RBP9.75□□□□□ -0.85
SNX4-205ENST00000482965 KSR1Q8IVT5 923 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 MCPH1Q8NEM0 835 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 RASSF8Q8NHQ8 419 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 CALML4Q96GE6 196 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 PLIN2Q99541 437 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 INO80BQ9C086 356 aaPredicted RBP9.75□□□□□ -0.85
SNX4-205ENST00000482965 NT5C3AQ9H0P0 336 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 POLR3FQ9H1D9 316 aaPredicted RBP9.75□□□□□ -0.85
SNX4-205ENST00000482965 BHMT2Q9H2M3 363 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 NKX2-4Q9H2Z4 354 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 TFIP11Q9UBB9 837 aaKnown RBP9.75□□□□□ -0.85
SNX4-205ENST00000482965 CIZ1Q9ULV3 898 aaPredicted RBP9.75□□□□□ -0.85
SNX4-205ENST00000482965 TCHHQ07283 1943 aa9.75□□□□□ -0.85
SNX4-205ENST00000482965 TMEM265A0A087WTH1 108 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 DENND3A2RUS2 1198 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 SLC26A4O43511 780 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 CSDE1O75534 798 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms