RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 PCDHA4Q9UN74 947 aa21.82■■□□□ 1.08
CHPF2-203ENST00000482173 CYP46A1Q9Y6A2 500 aa21.82■■□□□ 1.08
CHPF2-203ENST00000482173 CPLX1O14810 134 aa21.81■■□□□ 1.08
CHPF2-203ENST00000482173 HOXA2O43364 376 aa21.81■■□□□ 1.08
CHPF2-203ENST00000482173 LAG3P18627 525 aa21.81■■□□□ 1.08
CHPF2-203ENST00000482173 GPC3P51654 580 aa21.81■■□□□ 1.08
CHPF2-203ENST00000482173 TBC1D8BQ0IIM8 1120 aa21.81■■□□□ 1.08
CHPF2-203ENST00000482173 COASYQ13057 564 aa21.81■■□□□ 1.08
CHPF2-203ENST00000482173 RNF135Q8IUD6 432 aa21.81■■□□□ 1.08
CHPF2-203ENST00000482173 SMRP1Q8NCR6 262 aa21.81■■□□□ 1.08
CHPF2-203ENST00000482173 SCLT1Q96NL6 688 aa21.81■■□□□ 1.08
CHPF2-203ENST00000482173 CASD1Q96PB1 797 aa21.81■■□□□ 1.08
CHPF2-203ENST00000482173 LARP6Q9BRS8 491 aaKnown RBP21.81■■□□□ 1.08
CHPF2-203ENST00000482173 PSMD10O75832 226 aa21.8■■□□□ 1.08
CHPF2-203ENST00000482173 Q4G0T1 1027 aa21.8■■□□□ 1.08
CHPF2-203ENST00000482173 PDE12Q6L8Q7 609 aaKnown RBP21.8■■□□□ 1.08
CHPF2-203ENST00000482173 LRRC55Q6ZSA7 311 aa21.8■■□□□ 1.08
CHPF2-203ENST00000482173 MIER3Q7Z3K6 550 aa21.8■■□□□ 1.08
CHPF2-203ENST00000482173 ABI1Q8IZP0 508 aa21.8■■□□□ 1.08
CHPF2-203ENST00000482173 RNF169Q8NCN4 708 aa21.8■■□□□ 1.08
CHPF2-203ENST00000482173 RDM1Q8NG50 284 aa21.8■■□□□ 1.08
CHPF2-203ENST00000482173 ZNF274Q96GC6 653 aaPredicted RBP21.8■■□□□ 1.08
CHPF2-203ENST00000482173 RNF19AQ9NV58 838 aa21.8■■□□□ 1.08
CHPF2-203ENST00000482173 PUF60Q9UHX1 559 aaKnown RBP21.8■■□□□ 1.08
CHPF2-203ENST00000482173 MUTYHQ9UIF7 546 aa21.8■■□□□ 1.08
CHPF2-203ENST00000482173 C5orf42Q9H799 3197 aa21.79■■□□□ 1.08
CHPF2-203ENST00000482173 CYP3A7-CYP3A51PA0A087WV96 503 aa21.79■■□□□ 1.08
CHPF2-203ENST00000482173 EPB41L2O43491 1005 aaKnown RBP21.79■■□□□ 1.08
CHPF2-203ENST00000482173 DEXIO95424 95 aa21.79■■□□□ 1.08
CHPF2-203ENST00000482173 TDP2O95551 362 aa21.79■■□□□ 1.08
CHPF2-203ENST00000482173 DARSP14868 501 aaKnown RBP21.79■■□□□ 1.08
CHPF2-203ENST00000482173 CYP3A7P24462 503 aa21.79■■□□□ 1.08
CHPF2-203ENST00000482173 TARBP2Q15633 366 aaKnown RBP21.79■■□□□ 1.08
CHPF2-203ENST00000482173 DUSP6Q16828 381 aa21.79■■□□□ 1.08
CHPF2-203ENST00000482173 ECHDC2Q86YB7 292 aa21.79■■□□□ 1.08
CHPF2-203ENST00000482173 BLIDQ8IZY5 108 aa21.79■■□□□ 1.08
CHPF2-203ENST00000482173 NLRP7Q8WX94 980 aa21.79■■□□□ 1.08
CHPF2-203ENST00000482173 MRPS27Q92552 414 aaKnown RBP21.79■■□□□ 1.08
CHPF2-203ENST00000482173 SEPT9Q9UHD8 586 aaPredicted RBP21.79■■□□□ 1.08
CHPF2-203ENST00000482173 LZTS1Q9Y250 596 aa21.79■■□□□ 1.08
CHPF2-203ENST00000482173 FGFR4P22455 802 aa21.78■■□□□ 1.08
CHPF2-203ENST00000482173 HOXD11P31277 338 aaPredicted RBP21.78■■□□□ 1.08
CHPF2-203ENST00000482173 RBM10P98175 930 aaKnown RBP21.78■■□□□ 1.08
CHPF2-203ENST00000482173 PLCB3Q01970 1234 aa21.78■■□□□ 1.08
CHPF2-203ENST00000482173 STK3Q13188 491 aa21.78■■□□□ 1.08
CHPF2-203ENST00000482173 DRP2Q13474 957 aa21.78■■□□□ 1.08
CHPF2-203ENST00000482173 MTERF2Q49AM1 385 aa21.78■■□□□ 1.08
CHPF2-203ENST00000482173 XKR3Q5GH77 459 aa21.78■■□□□ 1.08
CHPF2-203ENST00000482173 HERC4Q5GLZ8 1057 aaPredicted RBP21.78■■□□□ 1.08
CHPF2-203ENST00000482173 CPLX2Q6PUV4 134 aaKnown RBP21.78■■□□□ 1.08
CHPF2-203ENST00000482173 KCNT2Q6UVM3 1135 aa21.78■■□□□ 1.08
CHPF2-203ENST00000482173 ZNF558Q96NG5 402 aa21.78■■□□□ 1.08
CHPF2-203ENST00000482173 CDCA3Q99618 268 aaPredicted RBP21.78■■□□□ 1.08
CHPF2-203ENST00000482173 NIFKQ9BYG3 293 aaKnown RBP21.78■■□□□ 1.08
CHPF2-203ENST00000482173 USP15Q9Y4E8 981 aaPredicted RBP21.78■■□□□ 1.08
CHPF2-203ENST00000482173 FSD2A1L4K1 749 aa21.77■■□□□ 1.08
CHPF2-203ENST00000482173 M0R2N6 131 aa21.77■■□□□ 1.08
CHPF2-203ENST00000482173 FSCN2O14926 492 aa21.77■■□□□ 1.08
CHPF2-203ENST00000482173 CSDE1O75534 798 aaKnown RBP21.77■■□□□ 1.08
CHPF2-203ENST00000482173 PLPP4Q5VZY2 271 aa21.77■■□□□ 1.08
CHPF2-203ENST00000482173 LRRC43Q8N309 656 aa21.77■■□□□ 1.08
CHPF2-203ENST00000482173 VN1R2Q8NFZ6 395 aa21.77■■□□□ 1.08
CHPF2-203ENST00000482173 AIFM3Q96NN9 605 aa21.77■■□□□ 1.08
CHPF2-203ENST00000482173 TM6SF1Q9BZW5 370 aa21.77■■□□□ 1.08
CHPF2-203ENST00000482173 MUC6Q6W4X9 2439 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 A0A0U1RQF3 1178 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 TMEM150BA6NC51 233 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 STBD1O95210 358 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 PBX3P40426 434 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 DNM2P50570 870 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 CDC42EP1Q00587 391 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 KRT17Q04695 432 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 CLLU1OSQ5K130 101 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 GALNT17Q6IS24 598 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 B3GNT9Q6UX72 402 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 DAGLBQ8NCG7 672 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 MBOAT7Q96N66 472 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 TCF25Q9BQ70 676 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 SH2D3AQ9BRG2 576 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 GCOM2Q9BZD3 368 aaPredicted RBP21.76■■□□□ 1.07
CHPF2-203ENST00000482173 ENTPD7Q9NQZ7 604 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 DACT1Q9NYF0 836 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 SPG21Q9NZD8 308 aa21.76■■□□□ 1.07
CHPF2-203ENST00000482173 DDX11L8A8MPP1 907 aa21.75■■□□□ 1.07
CHPF2-203ENST00000482173 LOC730098B7Z3J9 87 aa21.75■■□□□ 1.07
CHPF2-203ENST00000482173 EOMESO95936 686 aa21.75■■□□□ 1.07
CHPF2-203ENST00000482173 PPM1AP35813 382 aa21.75■■□□□ 1.07
CHPF2-203ENST00000482173 NONOQ15233 471 aaKnown RBP eCLIP21.75■■□□□ 1.075e-7■□□□□ 9.9
CHPF2-203ENST00000482173 NPY5RQ15761 445 aa21.75■■□□□ 1.07
CHPF2-203ENST00000482173 MOXD1Q6UVY6 613 aa21.75■■□□□ 1.07
CHPF2-203ENST00000482173 FAM177A1Q8N128 213 aaPredicted RBP21.75■■□□□ 1.07
CHPF2-203ENST00000482173 ETNPPLQ8TBG4 499 aa21.75■■□□□ 1.07
CHPF2-203ENST00000482173 CEP89Q96ST8 783 aa21.75■■□□□ 1.07
CHPF2-203ENST00000482173 NGRNQ9NPE2 291 aaKnown RBP21.75■■□□□ 1.07
CHPF2-203ENST00000482173 IGKV6-21A0A0C4DH24 114 aa21.74■■□□□ 1.07
CHPF2-203ENST00000482173 SRGAP2BP0DMP2 458 aa21.74■■□□□ 1.07
CHPF2-203ENST00000482173 INF2Q27J81 1249 aa21.74■■□□□ 1.07
CHPF2-203ENST00000482173 HFE2Q6ZVN8 426 aa21.74■■□□□ 1.07
CHPF2-203ENST00000482173 ZNF598Q86UK7 904 aaKnown RBP21.74■■□□□ 1.07
CHPF2-203ENST00000482173 HELQQ8TDG4 1101 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms