RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 ECE2O60344 883 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 AFPP02771 609 aaKnown RBP11.51□□□□□ -0.57
SIK3-210ENST00000480468 PDHA1P08559 390 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 HSPA6P17066 643 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 RBM5P52756 815 aaKnown RBP eCLIP11.51□□□□□ -0.57
SIK3-210ENST00000480468 ARID5AQ03989 594 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 MTFR1Q15390 333 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 ESCO1Q5FWF5 840 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 BARGINQ6ZT62 677 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 TRIM74Q86UV6 250 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 TRIM73Q86UV7 250 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 MYOCDQ8IZQ8 938 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 MIGA1Q8NAN2 632 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 FAM13CQ8NE31 585 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 RASGRP4Q8TDF6 673 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 MAIP1Q8WWC4 291 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 FGD4Q96M96 766 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 SERPINB12Q96P63 405 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 TIPINQ9BVW5 301 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 SEMA4AQ9H3S1 761 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 ATP8A2Q9NTI2 1148 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 DLGAP2Q9P1A6 1054 aa11.51□□□□□ -0.57
SIK3-210ENST00000480468 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.51□□□□□ -0.57
SIK3-210ENST00000480468 ANKRD36CQ5JPF3 1778 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 TRPM3Q9HCF6 1732 aaPredicted RBP11.5□□□□□ -0.57
SIK3-210ENST00000480468 TMEM120BA0PK00 339 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 SMIM23A6NLE4 172 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 PODXLO00592 558 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 TRAFD1O14545 582 aaPredicted RBP11.5□□□□□ -0.57
SIK3-210ENST00000480468 GFPT2O94808 682 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 UPP2O95045 317 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 MAGEA8P43361 318 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 OCRLQ01968 901 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 VSTM1Q6UX27 236 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 MAEAQ7L5Y9 396 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 VPS36Q86VN1 386 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 ZC3H3Q8IXZ2 948 aaKnown RBP11.5□□□□□ -0.57
SIK3-210ENST00000480468 ARHGAP18Q8N392 663 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 ZNF333Q96JL9 665 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 MAGEB18Q96M61 343 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 CCDC28BQ9BUN5 200 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 DCLRE1BQ9H816 532 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 PCMTD2Q9NV79 361 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 SEC63Q9UGP8 760 aaKnown RBP11.5□□□□□ -0.57
SIK3-210ENST00000480468 USP20Q9Y2K6 914 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 NCANO14594 1321 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 PITPNM2Q9BZ72 1349 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 MAGEB6P1A0A0J9YX57 407 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 DDX3YO15523 660 aaKnown RBP11.5□□□□□ -0.57
SIK3-210ENST00000480468 SETSIPP0DME0 302 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 RFC5P40937 340 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 MGAT5Q09328 741 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 GRB10Q13322 594 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 SETDB1Q15047 1291 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 ZNF568Q3ZCX4 644 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 TRMT10CQ7L0Y3 403 aaKnown RBP11.5□□□□□ -0.57
SIK3-210ENST00000480468 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.5□□□□□ -0.57
SIK3-210ENST00000480468 ECHDC2Q86YB7 292 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 SDR42E1Q8WUS8 393 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 LARP4BQ92615 738 aaKnown RBP11.5□□□□□ -0.57
SIK3-210ENST00000480468 STOML1Q9UBI4 398 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 PCYOX1Q9UHG3 505 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 SNX24Q9Y343 169 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 NR2E1Q9Y466 385 aa11.5□□□□□ -0.57
SIK3-210ENST00000480468 COL1A1P02452 1464 aaPredicted RBP11.49□□□□□ -0.57
SIK3-210ENST00000480468 SIGLEC16A6NMB1 481 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 EIF4E1BA6NMX2 242 aaKnown RBP11.49□□□□□ -0.57
SIK3-210ENST00000480468 TRAF5O00463 557 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 NVLO15381 856 aaKnown RBP11.49□□□□□ -0.57
SIK3-210ENST00000480468 CREB3O43889 395 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 PENKP01210 267 aaPredicted RBP11.49□□□□□ -0.57
SIK3-210ENST00000480468 GM2AP17900 193 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 CYP7A1P22680 504 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 CHRNA3P32297 505 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 VHLP40337 213 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 PTGIRP43119 386 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 RANBP1P43487 201 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 RASSF2P50749 326 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 YARSP54577 528 aaKnown RBP11.49□□□□□ -0.57
SIK3-210ENST00000480468 MUM1Q2TAK8 710 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 RNF220Q5VTB9 566 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 CGB2Q6NT52 195 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 DPY19L2P1Q6NXN4 242 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 INTS8Q75QN2 995 aaKnown RBP11.49□□□□□ -0.57
SIK3-210ENST00000480468 KRT25Q7Z3Z0 450 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 NCSTNQ92542 709 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 GPKOWQ92917 476 aaPredicted RBP eCLIP11.49□□□□□ -0.57
SIK3-210ENST00000480468 ARHGEF2Q92974 986 aaKnown RBP11.49□□□□□ -0.57
SIK3-210ENST00000480468 AZIN2Q96A70 460 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 CCDC113Q9H0I3 377 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 TLE6Q9H808 572 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 ZWILCHQ9H900 591 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 PDP2Q9P2J9 529 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 SLC4A7Q9Y6M7 1214 aa11.49□□□□□ -0.57
SIK3-210ENST00000480468 TNS2Q63HR2 1409 aa11.48□□□□□ -0.57
SIK3-210ENST00000480468 PHF2O75151 1096 aa11.48□□□□□ -0.57
SIK3-210ENST00000480468 PYGBP11216 843 aa11.48□□□□□ -0.57
SIK3-210ENST00000480468 SKIP12755 728 aa11.48□□□□□ -0.57
SIK3-210ENST00000480468 NT5C2P49902 561 aa11.48□□□□□ -0.57
SIK3-210ENST00000480468 POLGP54098 1239 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms