RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 QRICH1Q2TAL8 776 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 USH1GQ495M9 461 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 NXPE4Q6UWF7 544 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 FMR1NBQ8N0W7 255 aaPredicted RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 ANKRD35Q8N283 1001 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 SRBD1Q8N5C6 995 aaKnown RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 SAMD3Q8N6K7 520 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 FAM184AQ8NB25 1140 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 REPS2Q8NFH8 660 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 CCDC148Q8NFR7 591 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 ZNF296Q8WUU4 475 aaPredicted RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 SOCS4Q8WXH5 440 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 PIBF1Q8WXW3 757 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 CUL5Q93034 780 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 GTF3C6Q969F1 213 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 PIGSQ96S52 555 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 MMP19Q99542 508 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 MPHOSPH6Q99547 160 aaKnown RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 LLPHQ9BRT6 129 aaKnown RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 SLC26A6Q9BXS9 759 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 MOV10L1Q9BXT6 1211 aaKnown RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 MAF1Q9H063 256 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 GLT8D2Q9H1C3 349 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 CPVLQ9H3G5 476 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 NCOA5Q9HCD5 579 aaKnown RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 JPH1Q9HDC5 661 aaPredicted RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 TXNRD2Q9NNW7 524 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 METTL5Q9NRN9 209 aaKnown RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 HOMER2Q9NSB8 354 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 RNF146Q9NTX7 359 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 FAM8A1Q9UBU6 413 aa7.07□□□□□ -1.28
SF3B1-209ENST00000479532 ZNF214Q9UL59 606 aaPredicted RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.07□□□□□ -1.28
SF3B1-209ENST00000479532 PFASO15067 1338 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 STK36Q9NRP7 1315 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 SLC15A5A6NIM6 579 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 B4DLN1 442 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 PRPF3O43395 683 aaKnown RBP7.06□□□□□ -1.28
SF3B1-209ENST00000479532 CYTH3O43739 400 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 USP17L7P0C7H9 530 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 SCG2P13521 617 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 MRPL12P52815 198 aaKnown RBP7.06□□□□□ -1.28
SF3B1-209ENST00000479532 LBX1P52954 281 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 NAPAP54920 295 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 SLC20A2Q08357 652 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 TBC1D8BQ0IIM8 1120 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 TRIM29Q14134 588 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 PFKFB3Q16875 520 aaPredicted RBP7.06□□□□□ -1.28
SF3B1-209ENST00000479532 HEATR3Q7Z4Q2 680 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 GPR142Q7Z601 462 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 DPP9Q86TI2 863 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 CCDC83Q8IWF9 413 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 DMRTC2Q8IXT2 367 aaPredicted RBP7.06□□□□□ -1.28
SF3B1-209ENST00000479532 ABRAQ8N0Z2 381 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 CD99L2Q8TCZ2 262 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 RNF34Q969K3 372 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 SNX21Q969T3 373 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 MTMR8Q96EF0 704 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 DDX11Q96FC9 970 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 GTPBP4Q9BZE4 634 aaKnown RBP7.06□□□□□ -1.28
SF3B1-209ENST00000479532 R3HDMLQ9H3Y0 253 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 EFCC1Q9HA90 598 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 MAP3K20Q9NYL2 800 aaKnown RBP7.06□□□□□ -1.28
SF3B1-209ENST00000479532 SALL4Q9UJQ4 1053 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 PCDHA1Q9Y5I3 950 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 ZNF236Q9UL36 1845 aa7.06□□□□□ -1.28
SF3B1-209ENST00000479532 ZNF536O15090 1300 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 A0A1W2PP55 124 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 PTPDC1A2A3K4 754 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 MAP3K6O95382 1288 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 LARGE1O95461 756 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 GNA11P29992 359 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 SOX18P35713 384 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 RGS2P41220 211 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 PLAURQ03405 335 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 NTRK3Q16288 839 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 PKN2Q16513 984 aaKnown RBP7.05□□□□□ -1.28
SF3B1-209ENST00000479532 COL13A1Q5TAT6 717 aaPredicted RBP7.05□□□□□ -1.28
SF3B1-209ENST00000479532 KIAA0319Q5VV43 1072 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 PEAR1Q5VY43 1037 aaPredicted RBP7.05□□□□□ -1.28
SF3B1-209ENST00000479532 MCTP2Q6DN12 878 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 NSMFQ6X4W1 530 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 RNF207Q6ZRF8 634 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 NT5DC4Q86YG4 428 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 TEX2Q8IWB9 1127 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 FAM177A1Q8N128 213 aaPredicted RBP7.05□□□□□ -1.28
SF3B1-209ENST00000479532 NECAB1Q8N987 351 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 SMARCC2Q8TAQ2 1214 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 RAET1EQ8TD07 263 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 BICD2Q8TD16 824 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 NUDT8Q8WV74 236 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 PHKBQ93100 1093 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 TMX3Q96JJ7 454 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 PORCNQ9H237 461 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 EHMT1Q9H9B1 1298 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 BRMS1Q9HCU9 246 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 C6orf50Q9HD87 102 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 PRDM10Q9NQV6 1147 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 SH3GLB2Q9NR46 395 aa7.05□□□□□ -1.28
SF3B1-209ENST00000479532 BARHL2Q9NY43 387 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms