RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 CDH19Q9H159 772 aa4.48□□□□□ -1.69
SUPT20H-215ENST00000478911 WNT8AQ9H1J5 351 aa4.48□□□□□ -1.69
SUPT20H-215ENST00000478911 KCNG1Q9UIX4 513 aa4.48□□□□□ -1.69
SUPT20H-215ENST00000478911 TMPRSS11EQ9UL52 423 aa4.48□□□□□ -1.69
SUPT20H-215ENST00000478911 FAN1Q9Y2M0 1017 aa4.48□□□□□ -1.69
SUPT20H-215ENST00000478911 E2F8A0AVK6 867 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 TSPAN6O43657 245 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 PCDHGA12O60330 932 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 ABLIM3O94929 683 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 APOL3O95236 402 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 SCGB1D2O95969 90 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 IL18BPO95998 194 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 LIMS1P48059 325 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 GLRBP48167 497 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 IL13RA1P78552 427 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 FOXO4P98177 505 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 PPP2R5AQ15172 486 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 LRRC41Q15345 812 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 STILQ15468 1287 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 SPATS1Q496A3 300 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 PITRM1Q5JRX3 1037 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 PHF19Q5T6S3 580 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 CCDC62Q6P9F0 684 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 UNQ6494/PRO21346Q6UXR6 183 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 STK32CQ86UX6 486 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 AMOTL1Q8IY63 956 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 EAF2Q96CJ1 260 aaPredicted RBP4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 SIGLEC10Q96LC7 697 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 ZSWIM3Q96MP5 696 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 NOX5Q96PH1 765 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 C11orf84Q9BUA3 381 aaPredicted RBP4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 OR10A5Q9H207 317 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 PRDM12Q9H4Q4 367 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 KCND1Q9NSA2 647 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 MKS1Q9NXB0 559 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 ZIM2Q9NZV7 527 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 ARHGAP20Q9P2F6 1191 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 ZFP69BQ9UJL9 534 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 PCDHGA9Q9Y5G4 932 aaKnown RBP4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 PCDHGA8Q9Y5G5 932 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 PCDHGA7Q9Y5G6 932 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 PCDHGA6Q9Y5G7 932 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 PCDHGA3Q9Y5H0 932 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 PCDHGA2Q9Y5H1 932 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 IRAK3Q9Y616 596 aa4.47□□□□□ -1.69
SUPT20H-215ENST00000478911 ST20-MTHFSA0A0A6YYL1 179 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 MAFO75444 373 aaPredicted RBP4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 SNUPNO95149 360 aaKnown RBP4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 PFKMP08237 780 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 APEX1P27695 318 aaKnown RBP4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 MTNR1BP49286 362 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 SRSF2Q01130 221 aaKnown RBP4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 NOLC1Q14978 699 aaKnown RBP eCLIP4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 ODF1Q14990 250 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 UGT8Q16880 541 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 TMEM240Q5SV17 173 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 KANK2Q63ZY3 851 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 TTLL7Q6ZT98 887 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 KCNK18Q7Z418 384 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 LYSMD2Q8IV50 215 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 SP8Q8IXZ3 490 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 STPG3Q8N7X2 389 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 LINC00482Q8N8I6 264 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 KYQ8NBH2 561 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 TSR2Q969E8 191 aaKnown RBP4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 DACT3Q96B18 629 aaPredicted RBP4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 CLIC6Q96NY7 704 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 CAMKK2Q96RR4 588 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 WRNIP1Q96S55 665 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 TACO1Q9BSH4 297 aaKnown RBP4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 RHOBTB2Q9BYZ6 727 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 PITHD1Q9GZP4 211 aaPredicted RBP4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 QRSL1Q9H0R6 528 aaKnown RBP4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 TCF7L1Q9HCS4 588 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 ZNF277Q9NRM2 450 aaPredicted RBP4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 DNAJC28Q9NX36 388 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 DENND2AQ9ULE3 1009 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 EDARQ9UNE0 448 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 LUC7L2Q9Y383 392 aaKnown RBP4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 NUMBLQ9Y6R0 609 aa4.46□□□□□ -1.7
SUPT20H-215ENST00000478911 PLA2G1BP04054 148 aaKnown RBP4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 LPLP06858 475 aa4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 CCND1P24385 295 aa4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 RECQLP46063 649 aaPredicted RBP4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 BCAR1P56945 870 aa4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 MRPS9P82933 396 aaKnown RBP4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 HTRA3P83110 453 aa4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 EFEMP1Q12805 493 aa4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 TRIM25Q14258 630 aaKnown RBP4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 CLUL1Q15846 466 aa4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 TOR2AQ5JU69 321 aa4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 CXXC5Q7LFL8 322 aaKnown RBP4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 PNMA8AQ86V59 439 aaPredicted RBP4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 SLC41A1Q8IVJ1 513 aa4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 TMEFF1Q8IYR6 380 aa4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 TTLL6Q8N841 843 aa4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 RPGRQ92834 1020 aaKnown RBP4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 ZBTB8AQ96BR9 441 aa4.45□□□□□ -1.7
SUPT20H-215ENST00000478911 RAX2Q96IS3 184 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms