RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 TCF20Q9UGU0 1960 aaKnown RBP21.03■□□□□ 0.96
SREBF1-212ENST00000478616 LYPLA2O95372 231 aa21.03■□□□□ 0.96
SREBF1-212ENST00000478616 TXKP42681 527 aa21.03■□□□□ 0.96
SREBF1-212ENST00000478616 SARSP49591 514 aaKnown RBP21.03■□□□□ 0.96
SREBF1-212ENST00000478616 ZNF174Q15697 407 aa21.03■□□□□ 0.96
SREBF1-212ENST00000478616 NPAS4Q8IUM7 802 aa21.03■□□□□ 0.96
SREBF1-212ENST00000478616 NOSTRINQ8IVI9 506 aa21.03■□□□□ 0.96
SREBF1-212ENST00000478616 TMEM192Q8IY95 271 aa21.03■□□□□ 0.96
SREBF1-212ENST00000478616 MAP7D2Q96T17 732 aa21.03■□□□□ 0.96
SREBF1-212ENST00000478616 PCDHA12Q9UN75 941 aa21.03■□□□□ 0.96
SREBF1-212ENST00000478616 MRPL42Q9Y6G3 142 aaKnown RBP21.03■□□□□ 0.96
SREBF1-212ENST00000478616 YWHABP31946 246 aaKnown RBP21.02■□□□□ 0.96
SREBF1-212ENST00000478616 FAM102BQ5T8I3 360 aa21.02■□□□□ 0.96
SREBF1-212ENST00000478616 MICALL1Q8N3F8 863 aa21.02■□□□□ 0.96
SREBF1-212ENST00000478616 FBXO22Q8NEZ5 403 aa21.02■□□□□ 0.96
SREBF1-212ENST00000478616 COL25A1Q9BXS0 654 aaPredicted RBP21.02■□□□□ 0.96
SREBF1-212ENST00000478616 IFT122Q9HBG6 1241 aa21.02■□□□□ 0.96
SREBF1-212ENST00000478616 BMP2KQ9NSY1 1161 aaPredicted RBP21.02■□□□□ 0.96
SREBF1-212ENST00000478616 A0A087WZ62 844 aa21.01■□□□□ 0.95
SREBF1-212ENST00000478616 C5orf67F2Z3F1 127 aa21.01■□□□□ 0.95
SREBF1-212ENST00000478616 H3BNC9 293 aa21.01■□□□□ 0.95
SREBF1-212ENST00000478616 GPR182O15218 404 aa21.01■□□□□ 0.95
SREBF1-212ENST00000478616 ATF7P17544 494 aaPredicted RBP21.01■□□□□ 0.95
SREBF1-212ENST00000478616 TMOD1P28289 359 aa21.01■□□□□ 0.95
SREBF1-212ENST00000478616 CAMK1Q14012 370 aa21.01■□□□□ 0.95
SREBF1-212ENST00000478616 FIBCD1Q8N539 461 aa21.01■□□□□ 0.95
SREBF1-212ENST00000478616 FDXACB1Q9BRP7 624 aaPredicted RBP21.01■□□□□ 0.95
SREBF1-212ENST00000478616 ZSWIM4Q9H7M6 989 aa21.01■□□□□ 0.95
SREBF1-212ENST00000478616 SUCLA2Q9P2R7 463 aaPredicted RBP21.01■□□□□ 0.95
SREBF1-212ENST00000478616 ST18O60284 1047 aa21■□□□□ 0.95
SREBF1-212ENST00000478616 MED24O75448 989 aa21■□□□□ 0.95
SREBF1-212ENST00000478616 BAG4O95429 457 aaKnown RBP21■□□□□ 0.95
SREBF1-212ENST00000478616 SAFBQ15424 915 aaKnown RBP eCLIP21■□□□□ 0.95
SREBF1-212ENST00000478616 IL17AQ16552 155 aa21■□□□□ 0.95
SREBF1-212ENST00000478616 TTC38Q5R3I4 469 aa21■□□□□ 0.95
SREBF1-212ENST00000478616 SLC24A5Q71RS6 500 aa21■□□□□ 0.95
SREBF1-212ENST00000478616 TPH2Q8IWU9 490 aa21■□□□□ 0.95
SREBF1-212ENST00000478616 FAM184AQ8NB25 1140 aa21■□□□□ 0.95
SREBF1-212ENST00000478616 TMEM143Q96AN5 459 aa21■□□□□ 0.95
SREBF1-212ENST00000478616 CEP170P1Q96L14 293 aa21■□□□□ 0.95
SREBF1-212ENST00000478616 MINDY3Q9H8M7 445 aa21■□□□□ 0.95
SREBF1-212ENST00000478616 LMCD1Q9NZU5 365 aa21■□□□□ 0.95
SREBF1-212ENST00000478616 PCDHB6Q9Y5E3 794 aa21■□□□□ 0.95
SREBF1-212ENST00000478616 MUC3AQ02505 3323 aa20.99■□□□□ 0.95
SREBF1-212ENST00000478616 GJB2P29033 226 aa20.99■□□□□ 0.95
SREBF1-212ENST00000478616 BMPR1AP36894 532 aa20.99■□□□□ 0.95
SREBF1-212ENST00000478616 TFF2Q03403 129 aa20.99■□□□□ 0.95
SREBF1-212ENST00000478616 ECM1Q16610 540 aa20.99■□□□□ 0.95
SREBF1-212ENST00000478616 PAN2Q504Q3 1202 aaKnown RBP20.99■□□□□ 0.95
SREBF1-212ENST00000478616 ZNF598Q86UK7 904 aaKnown RBP20.99■□□□□ 0.95
SREBF1-212ENST00000478616 RHPN2Q8IUC4 686 aa20.99■□□□□ 0.95
SREBF1-212ENST00000478616 CMTR2Q8IYT2 770 aaKnown RBP20.99■□□□□ 0.95
SREBF1-212ENST00000478616 SAMD11Q96NU1 681 aa20.99■□□□□ 0.95
SREBF1-212ENST00000478616 GRM6O15303 877 aa20.98■□□□□ 0.95
SREBF1-212ENST00000478616 MARCH6O60337 910 aa20.98■□□□□ 0.95
SREBF1-212ENST00000478616 FGFR1P11362 822 aa20.98■□□□□ 0.95
SREBF1-212ENST00000478616 GPM6BQ13491 265 aa20.98■□□□□ 0.95
SREBF1-212ENST00000478616 BTG3Q14201 252 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-212ENST00000478616 EMC2Q15006 297 aa20.98■□□□□ 0.95
SREBF1-212ENST00000478616 CATSPER3Q86XQ3 398 aa20.98■□□□□ 0.95
SREBF1-212ENST00000478616 PRPF31Q8WWY3 499 aaKnown RBP20.98■□□□□ 0.95
SREBF1-212ENST00000478616 C1orf112Q9NSG2 853 aa20.98■□□□□ 0.95
SREBF1-212ENST00000478616 GTPBP6O43824 516 aaPredicted RBP20.97■□□□□ 0.95
SREBF1-212ENST00000478616 OR52Z1P0C646 297 aa20.97■□□□□ 0.95
SREBF1-212ENST00000478616 DNAJB1P25685 340 aa20.97■□□□□ 0.95
SREBF1-212ENST00000478616 TECP42680 631 aa20.97■□□□□ 0.95
SREBF1-212ENST00000478616 TRAPPC10P48553 1259 aa20.97■□□□□ 0.95
SREBF1-212ENST00000478616 RARRES1P49788 294 aa20.97■□□□□ 0.95
SREBF1-212ENST00000478616 CUL4AQ13619 759 aa20.97■□□□□ 0.95
SREBF1-212ENST00000478616 XKR9Q5GH70 373 aa20.97■□□□□ 0.95
SREBF1-212ENST00000478616 LRRC55Q6ZSA7 311 aa20.97■□□□□ 0.95
SREBF1-212ENST00000478616 ZNF710Q8N1W2 664 aa20.97■□□□□ 0.95
SREBF1-212ENST00000478616 PIGOQ8TEQ8 1089 aa20.97■□□□□ 0.95
SREBF1-212ENST00000478616 NLRP7Q8WX94 980 aa20.97■□□□□ 0.95
SREBF1-212ENST00000478616 COL4A3BPQ9Y5P4 624 aa20.97■□□□□ 0.95
SREBF1-212ENST00000478616 NCOR1O75376 2440 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 DENND3A2RUS2 1198 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 DLL1O00548 723 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 DKC1O60832 514 aaKnown RBP eCLIP20.96■□□□□ 0.95
SREBF1-212ENST00000478616 IBSPP21815 317 aaPredicted RBP20.96■□□□□ 0.95
SREBF1-212ENST00000478616 CTNNB1P35222 781 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 RFC5P40937 340 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 ORC2Q13416 577 aaPredicted RBP20.96■□□□□ 0.95
SREBF1-212ENST00000478616 CLLU1OSQ5K130 101 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 FAM43BQ6ZT52 329 aaPredicted RBP20.96■□□□□ 0.95
SREBF1-212ENST00000478616 FERMT3Q86UX7 667 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 ZNF410Q86VK4 478 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 ECHDC2Q86YB7 292 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 ASAP3Q8TDY4 903 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 MRPL38Q96DV4 380 aaKnown RBP20.96■□□□□ 0.95
SREBF1-212ENST00000478616 NLRP4Q96MN2 994 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 CASD1Q96PB1 797 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 CWH43Q9H720 699 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 ELAC1Q9H777 363 aaKnown RBP20.96■□□□□ 0.95
SREBF1-212ENST00000478616 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.96■□□□□ 0.95
SREBF1-212ENST00000478616 ANKEF1Q9NU02 776 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 TMEM161AQ9NX61 479 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 THEGQ9P2T0 379 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 PPME1Q9Y570 386 aa20.96■□□□□ 0.95
SREBF1-212ENST00000478616 MEIS3P2A8K0S8 358 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms