RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 DEFB129Q9H1M3 183 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 SLC9A2Q9UBY0 812 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 GIPC1O14908 333 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 IFNAR2P48551 515 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 RWDD2BP57060 319 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 CASP8Q14790 479 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 EZH2Q15910 746 aaKnown RBP15.3■□□□□ 0.04
NPHP4-208ENST00000478423 KRT39Q6A163 491 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 SAMD7Q7Z3H4 446 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 RHPN2Q8IUC4 686 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 AGXT2Q9BYV1 514 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 JPH1Q9HDC5 661 aaPredicted RBP15.3■□□□□ 0.04
NPHP4-208ENST00000478423 FBXO28Q9NVF7 368 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 CAPN11Q9UMQ6 739 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 FAN1Q9Y2M0 1017 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 TNS2Q63HR2 1409 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 NR3C2P08235 984 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 FXR1P51114 621 aaKnown RBP eCLIP15.3■□□□□ 0.04
NPHP4-208ENST00000478423 REEP2Q9BRK0 252 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 POLR3FQ9H1D9 316 aaPredicted RBP15.3■□□□□ 0.04
NPHP4-208ENST00000478423 IFT122Q9HBG6 1241 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 EMSYQ7Z589 1322 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 EIF3CLB5ME19 914 aaKnown RBP15.3■□□□□ 0.04
NPHP4-208ENST00000478423 YWHABP31946 246 aaKnown RBP15.3■□□□□ 0.04
NPHP4-208ENST00000478423 GMPSP49915 693 aaPredicted RBP15.3■□□□□ 0.04
NPHP4-208ENST00000478423 GLYCTKQ8IVS8 523 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 CACNA2D3Q8IZS8 1091 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 EIF3CQ99613 913 aaKnown RBP15.3■□□□□ 0.04
NPHP4-208ENST00000478423 SPON1Q9HCB6 807 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 NGRNQ9NPE2 291 aaKnown RBP15.3■□□□□ 0.04
NPHP4-208ENST00000478423 GGA3Q9NZ52 723 aa15.3■□□□□ 0.04
NPHP4-208ENST00000478423 TRIP13Q15645 432 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-208ENST00000478423 NTRK3Q16288 839 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 PASD1Q8IV76 773 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 PLCD3Q8N3E9 789 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 TMEM35BQ8NCS4 154 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 RBM46Q8TBY0 533 aaKnown RBP15.29■□□□□ 0.04
NPHP4-208ENST00000478423 RTFDC1Q9BY42 306 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-208ENST00000478423 PODXL2Q9NZ53 605 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 ADGRB2O60241 1585 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 NWD1Q149M9 1564 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 PHKA2P46019 1235 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 VPS52Q8N1B4 723 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 CCNYQ8ND76 341 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 CCT6BQ92526 530 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 EDEM3Q9BZQ6 932 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 TCRBV5S4A2TA0A5A2 114 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 CCDC188H7C350 402 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 MCF2LO15068 1137 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 CRCPO75575 148 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 GKAP1Q5VSY0 366 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-208ENST00000478423 RNF10Q8N5U6 811 aaKnown RBP15.29■□□□□ 0.04
NPHP4-208ENST00000478423 OR6B3Q8NGW1 331 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 STMN2Q93045 179 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 FMO2Q99518 471 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 KCNF1Q9H3M0 494 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 SLC38A10Q9HBR0 1119 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 MYOZ2Q9NPC6 264 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 ANAPC5Q9UJX4 755 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 NFU1Q9UMS0 254 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 GPC5P78333 572 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 DR1Q01658 176 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 RNASELQ05823 741 aaKnown RBP15.29■□□□□ 0.04
NPHP4-208ENST00000478423 E4F1Q66K89 784 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-208ENST00000478423 FRMD5Q7Z6J6 570 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 MCUR1Q96AQ8 359 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 C11orf70Q9BRQ4 267 aa15.29■□□□□ 0.04
NPHP4-208ENST00000478423 INTS2Q9H0H0 1204 aaKnown RBP15.29■□□□□ 0.04
NPHP4-208ENST00000478423 CCDC62Q6P9F0 684 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 SLC16A10Q8TF71 515 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 SPATA33Q96N06 139 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 ELP3Q9H9T3 547 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 HAUS2Q9NVX0 235 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 PRPSAP2O60256 369 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 ZRANB2O95218 330 aaKnown RBP eCLIP15.28■□□□□ 0.04
NPHP4-208ENST00000478423 MYCP01106 439 aaPredicted RBP15.28■□□□□ 0.04
NPHP4-208ENST00000478423 ITKQ08881 620 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 RPUSD2Q8IZ73 545 aaKnown RBP15.28■□□□□ 0.04
NPHP4-208ENST00000478423 ACER1Q8TDN7 264 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 RILPQ96NA2 401 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 WDR24Q96S15 920 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 INTS9Q9NV88 658 aaKnown RBP15.28■□□□□ 0.04
NPHP4-208ENST00000478423 HDAC6Q9UBN7 1215 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 SCINQ9Y6U3 715 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 MIF4GDA9UHW6 222 aaKnown RBP15.28■□□□□ 0.04
NPHP4-208ENST00000478423 CALRP27797 417 aaKnown RBP15.28■□□□□ 0.04
NPHP4-208ENST00000478423 STAT5BP51692 787 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 ZNF699Q32M78 642 aa15.28■□□□□ 0.04
NPHP4-208ENST00000478423 SDCCAG8Q86SQ7 713 aaPredicted RBP15.28■□□□□ 0.04
NPHP4-208ENST00000478423 FTLP02792 175 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-208ENST00000478423 PNMA6AP0CW24 399 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-208ENST00000478423 TROVE2P10155 538 aaKnown RBP eCLIP15.27■□□□□ 0.04
NPHP4-208ENST00000478423 RPA1P27694 616 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 ARL4AP40617 200 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 SLCO1A2P46721 670 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 BASP1P80723 227 aaKnown RBP15.27■□□□□ 0.04
NPHP4-208ENST00000478423 CCZ1BP86790 482 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 CCZ1P86791 482 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-208ENST00000478423 ADCY1Q08828 1119 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 NR1I3Q14994 352 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms