RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 BARHL2Q9NY43 387 aa5.41□□□□□ -1.54
CCDC39-204ENST00000476379 SAMD15Q9P1V8 674 aa5.41□□□□□ -1.54
CCDC39-204ENST00000476379 LEMD3Q9Y2U8 911 aa5.41□□□□□ -1.54
CCDC39-204ENST00000476379 STXBP3O00186 592 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 GJB6O95452 261 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 TCP1P17987 556 aaKnown RBP5.4□□□□□ -1.54
CCDC39-204ENST00000476379 ADCY8P40145 1251 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 ORC1Q13415 861 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 LONRF1Q17RB8 773 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 NAALADL2Q58DX5 795 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 MDH1BQ5I0G3 518 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 C12orf60Q5U649 245 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 DPY19L2Q6NUT2 758 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 CCDC51Q96ER9 411 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 NUP58Q9BVL2 599 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 TSGA10Q9BZW7 698 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 AZI2Q9H6S1 392 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 C10orf88Q9H8K7 445 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 MAD2L2Q9UI95 211 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 SNX12Q9UMY4 172 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 SLX4Q8IY92 1834 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 SART1O43290 800 aaKnown RBP5.4□□□□□ -1.54
CCDC39-204ENST00000476379 PPFIA4O75335 1185 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 PEX3P56589 373 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 IGBP1P78318 339 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 SPP2Q13103 211 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 XKR9Q5GH70 373 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 APOBEC3HQ6NTF7 200 aaKnown RBP5.4□□□□□ -1.54
CCDC39-204ENST00000476379 CCNI2Q6ZMN8 369 aaPredicted RBP5.4□□□□□ -1.54
CCDC39-204ENST00000476379 VSIG1Q86XK7 387 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 SULF1Q8IWU6 871 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 RNF25Q96BH1 459 aaPredicted RBP5.4□□□□□ -1.54
CCDC39-204ENST00000476379 DYDC2Q96IM9 177 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 ZIC5Q96T25 663 aa5.4□□□□□ -1.54
CCDC39-204ENST00000476379 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.4□□□□□ -1.54
CCDC39-204ENST00000476379 NOC2LQ9Y3T9 749 aaKnown RBP5.4□□□□□ -1.54
CCDC39-204ENST00000476379 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.4□□□□□ -1.54
CCDC39-204ENST00000476379 PKD1L3Q7Z443 1732 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 SDK1Q7Z5N4 2213 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 ZNF263O14978 683 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 LMNB1P20700 586 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 CETN1Q12798 172 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 ECM1Q16610 540 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 NUGGCQ68CJ6 796 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 MICALCLQ6ZW33 695 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 APBB1IPQ7Z5R6 666 aaPredicted RBP5.4□□□□□ -1.55
CCDC39-204ENST00000476379 FBXO11Q86XK2 927 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 IRF2BP1Q8IU81 584 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 ARHGEF2Q92974 986 aaKnown RBP5.4□□□□□ -1.55
CCDC39-204ENST00000476379 C9orf72Q96LT7 481 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 SGIP1Q9BQI5 828 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 REEP2Q9BRK0 252 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 PYM1Q9BRP8 204 aaKnown RBP5.4□□□□□ -1.55
CCDC39-204ENST00000476379 MED4Q9NPJ6 270 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 DNAJC12Q9UKB3 198 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 CAPN11Q9UMQ6 739 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 NUP98P52948 1817 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 AFDNP55196 1824 aaKnown RBP5.4□□□□□ -1.55
CCDC39-204ENST00000476379 URB1O60287 2271 aaKnown RBP5.4□□□□□ -1.55
CCDC39-204ENST00000476379 DCDC2CA8MYV0 355 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 SLC16A4O15374 487 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 TUBB4AP04350 444 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 SAT1P21673 171 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 EPHB4P54760 987 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 GRB10Q13322 594 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 TMED2Q15363 201 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 SEL1L2Q5TEA6 688 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 PLA2G4FQ68DD2 849 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 TTI2Q6NXR4 508 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 RSBN1LQ6PCB5 846 aaPredicted RBP5.4□□□□□ -1.55
CCDC39-204ENST00000476379 ZBTB33Q86T24 672 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 CPNE8Q86YQ8 564 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 CTAGE3PQ8IX95 158 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 SRRM1Q8IYB3 904 aaKnown RBP5.4□□□□□ -1.55
CCDC39-204ENST00000476379 CACNA2D3Q8IZS8 1091 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 SLC17A8Q8NDX2 589 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 C7orf43Q8WVR3 580 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 DHTKD1Q96HY7 919 aaPredicted RBP5.4□□□□□ -1.55
CCDC39-204ENST00000476379 DUSP9Q99956 384 aaKnown RBP5.4□□□□□ -1.55
CCDC39-204ENST00000476379 COA1Q9GZY4 146 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 DCTN4Q9UJW0 460 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 INPP5FQ9Y2H2 1132 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 FLT1P17948 1338 aa5.4□□□□□ -1.55
CCDC39-204ENST00000476379 KDM3BQ7LBC6 1761 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 MYO7AQ13402 2215 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 GON4LQ3T8J9 2241 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 CCDC78A2IDD5 438 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 OPLAHO14841 1288 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 PDHBP11177 359 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 FLT3P36888 993 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 NPEPPSP55786 919 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 DRAP1Q14919 205 aaPredicted RBP5.39□□□□□ -1.55
CCDC39-204ENST00000476379 C10orf76Q5T2E6 689 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 CCDC125Q86Z20 511 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 RTKN2Q8IZC4 609 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 CCDC26Q8TAB7 109 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 LRRC15Q8TF66 581 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 CASKIN2Q8WXE0 1202 aa5.39□□□□□ -1.55
CCDC39-204ENST00000476379 N4BP2L2Q92802 583 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms