RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 MTMR1Q13613 665 aa17.45■□□□□ 0.38
VARS2-207ENST00000476162 TBC1D10BQ4KMP7 808 aaPredicted RBP17.45■□□□□ 0.38
VARS2-207ENST00000476162 IQCEQ6IPM2 695 aa17.45■□□□□ 0.38
VARS2-207ENST00000476162 GJB7Q6PEY0 223 aa17.45■□□□□ 0.38
VARS2-207ENST00000476162 MICALL2Q8IY33 904 aa17.45■□□□□ 0.38
VARS2-207ENST00000476162 PPP1R1BQ9UD71 204 aaPredicted RBP17.45■□□□□ 0.38
VARS2-207ENST00000476162 PPP1R9AQ9ULJ8 1098 aa17.45■□□□□ 0.38
VARS2-207ENST00000476162 ZHX2Q9Y6X8 837 aa17.45■□□□□ 0.38
VARS2-207ENST00000476162 UBE4BO95155 1302 aa17.45■□□□□ 0.38
VARS2-207ENST00000476162 GTPBP10A4D1E9 387 aaKnown RBP17.44■□□□□ 0.38
VARS2-207ENST00000476162 PPP1R12BO60237 982 aaPredicted RBP17.44■□□□□ 0.38
VARS2-207ENST00000476162 CORO7P57737 925 aa17.44■□□□□ 0.38
VARS2-207ENST00000476162 PLS1Q14651 629 aa17.44■□□□□ 0.38
VARS2-207ENST00000476162 CCDC91Q7Z6B0 441 aa17.44■□□□□ 0.38
VARS2-207ENST00000476162 MKNK1Q9BUB5 465 aa17.44■□□□□ 0.38
VARS2-207ENST00000476162 RPAP3Q9H6T3 665 aaPredicted RBP17.44■□□□□ 0.38
VARS2-207ENST00000476162 DMAC2Q9NW81 257 aa17.44■□□□□ 0.38
VARS2-207ENST00000476162 HACL1Q9UJ83 578 aa17.44■□□□□ 0.38
VARS2-207ENST00000476162 FBXL5Q9UKA1 691 aa17.44■□□□□ 0.38
VARS2-207ENST00000476162 BZW2Q9Y6E2 419 aaKnown RBP17.44■□□□□ 0.38
VARS2-207ENST00000476162 UTRNP46939 3433 aa17.44■□□□□ 0.38
VARS2-207ENST00000476162 TARSL2A2RTX5 802 aaKnown RBP17.44■□□□□ 0.38
VARS2-207ENST00000476162 PALMO75781 387 aa17.44■□□□□ 0.38
VARS2-207ENST00000476162 ZMYND10O75800 440 aa17.44■□□□□ 0.38
VARS2-207ENST00000476162 RPS12P25398 132 aaKnown RBP17.44■□□□□ 0.38
VARS2-207ENST00000476162 GMPSP49915 693 aaPredicted RBP17.44■□□□□ 0.38
VARS2-207ENST00000476162 NBPF12Q5TAG4 269 aaPredicted RBP17.44■□□□□ 0.38
VARS2-207ENST00000476162 SMARCAL1Q9NZC9 954 aa17.44■□□□□ 0.38
VARS2-207ENST00000476162 KCNG1Q9UIX4 513 aa17.44■□□□□ 0.38
VARS2-207ENST00000476162 PPP1R37O75864 691 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 CPP00450 1065 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 SPP2Q13103 211 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 CASP8Q14790 479 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 FOXR1Q6PIV2 292 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 EP400NLQ6ZTU2 488 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 ZNF572Q7Z3I7 529 aaPredicted RBP17.43■□□□□ 0.38
VARS2-207ENST00000476162 SYCP3Q8IZU3 236 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 SPATA4Q8NEY3 305 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 STRA6Q9BX79 667 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 CXorf56Q9H5V9 222 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 EHD2Q9NZN4 543 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 FRMD4BQ9Y2L6 1034 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 CTDP1Q9Y5B0 961 aaPredicted RBP17.43■□□□□ 0.38
VARS2-207ENST00000476162 MYCLP12524 364 aaPredicted RBP17.43■□□□□ 0.38
VARS2-207ENST00000476162 PRKCIP41743 596 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 QARSP47897 775 aaKnown RBP17.43■□□□□ 0.38
VARS2-207ENST00000476162 FMO5P49326 533 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 RARRES1P49788 294 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 JAM2P57087 298 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 PGM5Q15124 567 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 SH2D3AQ9BRG2 576 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 PDE11AQ9HCR9 933 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 GINM1Q9NU53 330 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 MAP3K20Q9NYL2 800 aaKnown RBP17.43■□□□□ 0.38
VARS2-207ENST00000476162 DONSONQ9NYP3 566 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 CNOT7Q9UIV1 285 aaKnown RBP17.43■□□□□ 0.38
VARS2-207ENST00000476162 GJA3Q9Y6H8 435 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 FER1L6Q2WGJ9 1857 aa17.43■□□□□ 0.38
VARS2-207ENST00000476162 K7ENM7 598 aa17.42■□□□□ 0.38
VARS2-207ENST00000476162 MCM3P25205 808 aa17.42■□□□□ 0.38
VARS2-207ENST00000476162 CCDC181Q5TID7 509 aa17.42■□□□□ 0.38
VARS2-207ENST00000476162 DNAAF5Q86Y56 855 aa17.42■□□□□ 0.38
VARS2-207ENST00000476162 WNK4Q96J92 1243 aa17.42■□□□□ 0.38
VARS2-207ENST00000476162 RMDN3Q96TC7 470 aa17.42■□□□□ 0.38
VARS2-207ENST00000476162 ATP9AO75110 1047 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 ZBED4O75132 1171 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 FTCDO95954 541 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 TRIM49P0CI25 452 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 TRIM49CP0CI26 452 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 MATR3P43243 847 aaKnown RBP eCLIP17.41■□□□□ 0.38
VARS2-207ENST00000476162 ITIH3Q06033 890 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 CBWD6Q4V339 395 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 CBWD3Q5JTY5 395 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 CBWD5Q5RIA9 395 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 RNF207Q6ZRF8 634 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 TRMT1LQ7Z2T5 733 aaKnown RBP17.41■□□□□ 0.38
VARS2-207ENST00000476162 MMGT1Q8N4V1 131 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 RDH13Q8NBN7 331 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 LARSQ9P2J5 1176 aaKnown RBP17.41■□□□□ 0.38
VARS2-207ENST00000476162 TSKSQ9UJT2 592 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 NAGPAQ9UK23 515 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 DBR1Q9UK59 544 aaKnown RBP17.41■□□□□ 0.38
VARS2-207ENST00000476162 PCDHGC5Q9Y5F6 944 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 TMEM150BA6NC51 233 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 LRRIQ3A6PVS8 624 aaPredicted RBP17.41■□□□□ 0.38
VARS2-207ENST00000476162 VWA5AO00534 786 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 EXOC3O60645 756 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 C10orf76Q5T2E6 689 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 NSMFQ6X4W1 530 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 ATG4CQ96DT6 458 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 MS4A14Q96JA4 679 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 CEP89Q96ST8 783 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 HINFPQ9BQA5 517 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 PDCD2LQ9BRP1 358 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 TBC1D22BQ9NU19 505 aa17.41■□□□□ 0.38
VARS2-207ENST00000476162 YWHABP31946 246 aaKnown RBP17.4■□□□□ 0.38
VARS2-207ENST00000476162 PAFAH1B1P43034 410 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 DNA2P51530 1060 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 UGCGQ16739 394 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 ALKBH5Q6P6C2 394 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms