RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 SRFP11831 508 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 FAM189BP81408 668 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 SART3Q15020 963 aaKnown RBP16.07■□□□□ 0.16
ATG9A-220ENST00000475339 LETM2Q2VYF4 491 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 ZNF528Q3MIS6 628 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 IFIT1BQ5T764 474 aaKnown RBP16.07■□□□□ 0.16
ATG9A-220ENST00000475339 LRRC43Q8N309 656 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 PJA1Q8NG27 643 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 TMEM40Q8WWA1 233 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 SEPT1Q8WYJ6 367 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 SMARCAD1Q9H4L7 1026 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 SFXN1Q9H9B4 322 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 CDHR5Q9HBB8 845 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 RNF19AQ9NV58 838 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 ANGPTL2Q9UKU9 493 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 PCDHA2Q9Y5H9 948 aa16.07■□□□□ 0.16
ATG9A-220ENST00000475339 CEP295Q9C0D2 2601 aa16.06■□□□□ 0.16
ATG9A-220ENST00000475339 SPDYE4A6NLX3 237 aa16.06■□□□□ 0.16
ATG9A-220ENST00000475339 NT5C1B-RDH14C9J2C7 533 aa16.06■□□□□ 0.16
ATG9A-220ENST00000475339 SLC27A2O14975 620 aa16.06■□□□□ 0.16
ATG9A-220ENST00000475339 ATP9AO75110 1047 aa16.06■□□□□ 0.16
ATG9A-220ENST00000475339 BMS1Q14692 1282 aaKnown RBP16.06■□□□□ 0.16
ATG9A-220ENST00000475339 NONOQ15233 471 aaKnown RBP eCLIP16.06■□□□□ 0.16
ATG9A-220ENST00000475339 CREB3L3Q68CJ9 461 aa16.06■□□□□ 0.16
ATG9A-220ENST00000475339 VPS52Q8N1B4 723 aa16.06■□□□□ 0.16
ATG9A-220ENST00000475339 STAG2Q8N3U4 1231 aa16.06■□□□□ 0.16
ATG9A-220ENST00000475339 ENAHQ8N8S7 591 aaPredicted RBP16.06■□□□□ 0.16
ATG9A-220ENST00000475339 BORCS6Q96GS4 357 aa16.06■□□□□ 0.16
ATG9A-220ENST00000475339 ELAC1Q9H777 363 aaKnown RBP16.06■□□□□ 0.16
ATG9A-220ENST00000475339 SPATA6Q9NWH7 488 aaPredicted RBP16.06■□□□□ 0.16
ATG9A-220ENST00000475339 PCDHGA2Q9Y5H1 932 aa16.06■□□□□ 0.16
ATG9A-220ENST00000475339 FRMPD4Q14CM0 1322 aa16.05■□□□□ 0.16
ATG9A-220ENST00000475339 SLC30A4O14863 429 aa16.05■□□□□ 0.16
ATG9A-220ENST00000475339 IFIT3O14879 490 aaKnown RBP16.05■□□□□ 0.16
ATG9A-220ENST00000475339 ZBTB5O15062 677 aa16.05■□□□□ 0.16
ATG9A-220ENST00000475339 REC8O95072 547 aa16.05■□□□□ 0.16
ATG9A-220ENST00000475339 KCNA4P22459 653 aa16.05■□□□□ 0.16
ATG9A-220ENST00000475339 GBP2P32456 591 aaPredicted RBP16.05■□□□□ 0.16
ATG9A-220ENST00000475339 METAP2P50579 478 aaKnown RBP eCLIP16.05■□□□□ 0.16
ATG9A-220ENST00000475339 CSTF1Q05048 431 aaKnown RBP16.05■□□□□ 0.16
ATG9A-220ENST00000475339 DCLRE1AQ6PJP8 1040 aa16.05■□□□□ 0.16
ATG9A-220ENST00000475339 CYB5R4Q7L1T6 521 aa16.05■□□□□ 0.16
ATG9A-220ENST00000475339 NME8Q8N427 588 aa16.05■□□□□ 0.16
ATG9A-220ENST00000475339 GIMAP8Q8ND71 665 aaPredicted RBP16.05■□□□□ 0.16
ATG9A-220ENST00000475339 MTMR8Q96EF0 704 aa16.05■□□□□ 0.16
ATG9A-220ENST00000475339 EPC1Q9H2F5 836 aa16.05■□□□□ 0.16
ATG9A-220ENST00000475339 FBXO4Q9UKT5 387 aa16.05■□□□□ 0.16
ATG9A-220ENST00000475339 TAF6LQ9Y6J9 622 aa16.05■□□□□ 0.16
ATG9A-220ENST00000475339 FRYQ5TBA9 3013 aa16.04■□□□□ 0.16
ATG9A-220ENST00000475339 SMIM35A0A1B0GVV1 85 aa16.04■□□□□ 0.16
ATG9A-220ENST00000475339 LAMTOR5O43504 91 aa16.04■□□□□ 0.16
ATG9A-220ENST00000475339 PLCB4Q15147 1175 aa16.04■□□□□ 0.16
ATG9A-220ENST00000475339 PTPN14Q15678 1187 aa16.04■□□□□ 0.16
ATG9A-220ENST00000475339 HOMER1Q86YM7 354 aa16.04■□□□□ 0.16
ATG9A-220ENST00000475339 ABI1Q8IZP0 508 aa16.04■□□□□ 0.16
ATG9A-220ENST00000475339 ZBTB44Q8NCP5 570 aa16.04■□□□□ 0.16
ATG9A-220ENST00000475339 PCYT2Q99447 389 aa16.04■□□□□ 0.16
ATG9A-220ENST00000475339 ZBP1Q9H171 429 aa16.04■□□□□ 0.16
ATG9A-220ENST00000475339 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.04■□□□□ 0.16
ATG9A-220ENST00000475339 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.03■□□□□ 0.16
ATG9A-220ENST00000475339 GPR182O15218 404 aa16.03■□□□□ 0.16
ATG9A-220ENST00000475339 KCNA2P16389 499 aa16.03■□□□□ 0.16
ATG9A-220ENST00000475339 SPEM2Q0P670 501 aa16.03■□□□□ 0.16
ATG9A-220ENST00000475339 WTAPQ15007 396 aa16.03■□□□□ 0.16
ATG9A-220ENST00000475339 NECTIN1Q15223 517 aa16.03■□□□□ 0.16
ATG9A-220ENST00000475339 FAM43BQ6ZT52 329 aaPredicted RBP16.03■□□□□ 0.16
ATG9A-220ENST00000475339 NETO1Q8TDF5 533 aa16.03■□□□□ 0.16
ATG9A-220ENST00000475339 TMEM169Q96HH4 297 aa16.03■□□□□ 0.16
ATG9A-220ENST00000475339 PKD2L1Q9P0L9 805 aa16.03■□□□□ 0.16
ATG9A-220ENST00000475339 IRAK3Q9Y616 596 aa16.03■□□□□ 0.16
ATG9A-220ENST00000475339 SETXQ7Z333 2677 aaKnown RBP16.02■□□□□ 0.16
ATG9A-220ENST00000475339 KLRF2D3W0D1 207 aa16.02■□□□□ 0.16
ATG9A-220ENST00000475339 HOXA2O43364 376 aa16.02■□□□□ 0.16
ATG9A-220ENST00000475339 CTSAP10619 480 aa16.02■□□□□ 0.16
ATG9A-220ENST00000475339 MCM5P33992 734 aa16.02■□□□□ 0.16
ATG9A-220ENST00000475339 ALDH7A1P49419 539 aaKnown RBP16.02■□□□□ 0.16
ATG9A-220ENST00000475339 DSC3Q14574 896 aa16.02■□□□□ 0.16
ATG9A-220ENST00000475339 MTHFD1LQ6UB35 978 aa16.02■□□□□ 0.16
ATG9A-220ENST00000475339 NLRX1Q86UT6 975 aa16.02■□□□□ 0.16
ATG9A-220ENST00000475339 TMEM173Q86WV6 379 aaPredicted RBP16.02■□□□□ 0.16
ATG9A-220ENST00000475339 MB21D2Q8IYB1 491 aaPredicted RBP16.02■□□□□ 0.16
ATG9A-220ENST00000475339 MYADMQ96S97 322 aa16.02■□□□□ 0.16
ATG9A-220ENST00000475339 ZSCAN32Q9NX65 697 aa16.02■□□□□ 0.16
ATG9A-220ENST00000475339 EPS15L1Q9UBC2 864 aa16.02■□□□□ 0.16
ATG9A-220ENST00000475339 GMEB2Q9UKD1 530 aa16.02■□□□□ 0.16
ATG9A-220ENST00000475339 C2orf16Q68DN1 1984 aa16.02■□□□□ 0.15
ATG9A-220ENST00000475339 PRC1O43663 620 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 LILRB5O75023 590 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 PMLP29590 882 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 BCAR1P56945 870 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 STARD6P59095 220 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 GIT2Q14161 759 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 KRT32Q14532 448 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 SEC23AQ15436 765 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 CLLU1OSQ5K130 101 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 ODR4Q5SWX8 454 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 PCNX4Q63HM2 1172 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 C15orf39Q6ZRI6 1047 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 FAM228AQ86W67 206 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 RNF169Q8NCN4 708 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms