RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 DOK7Q18PE1 504 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 SHROOM1Q2M3G4 852 aaPredicted RBP15.28■□□□□ 0.04
RPGR-206ENST00000474584 STXBP4Q6ZWJ1 553 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 HS2ST1Q7LGA3 356 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 GMCL1P1Q8NEA9 526 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 SLC35G2Q8TBE7 412 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 GMCL1Q96IK5 515 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 PARVGQ9HBI0 331 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 OSGEPQ9NPF4 335 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 RGL1Q9NZL6 768 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 ANKRD31Q8N7Z5 1873 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 GMNCA6NCL1 334 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 FLT3P36888 993 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 DHX9Q08211 1270 aaKnown RBP15.28■□□□□ 0.04
RPGR-206ENST00000474584 DRAP1Q14919 205 aaPredicted RBP15.28■□□□□ 0.04
RPGR-206ENST00000474584 CLUL1Q15846 466 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 RNF187Q5TA31 235 aaPredicted RBP15.28■□□□□ 0.04
RPGR-206ENST00000474584 CYFIP2Q96F07 1278 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 ZDHHC15Q96MV8 337 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 FMO2Q99518 471 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 CELF4Q9BZC1 486 aaKnown RBP15.28■□□□□ 0.04
RPGR-206ENST00000474584 TUFT1Q9NNX1 390 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 DNAJC12Q9UKB3 198 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 FRMD4BQ9Y2L6 1034 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 NRXN2Q9P2S2 1712 aa15.28■□□□□ 0.04
RPGR-206ENST00000474584 SFI1A8K8P3 1242 aa15.27■□□□□ 0.04
RPGR-206ENST00000474584 POLRMTO00411 1230 aaKnown RBP15.27■□□□□ 0.04
RPGR-206ENST00000474584 EML1O00423 815 aa15.27■□□□□ 0.04
RPGR-206ENST00000474584 CYP3A4P08684 503 aa15.27■□□□□ 0.04
RPGR-206ENST00000474584 ABCB4P21439 1286 aa15.27■□□□□ 0.04
RPGR-206ENST00000474584 NMT1P30419 496 aaKnown RBP15.27■□□□□ 0.04
RPGR-206ENST00000474584 HOXA13P31271 388 aaPredicted RBP15.27■□□□□ 0.04
RPGR-206ENST00000474584 HNRNPH1P31943 449 aaKnown RBP15.27■□□□□ 0.04
RPGR-206ENST00000474584 CDR1P51861 262 aa15.27■□□□□ 0.04
RPGR-206ENST00000474584 PTENP60484 403 aa15.27■□□□□ 0.04
RPGR-206ENST00000474584 KRT71Q3SY84 523 aa15.27■□□□□ 0.04
RPGR-206ENST00000474584 PIGOQ8TEQ8 1089 aa15.27■□□□□ 0.04
RPGR-206ENST00000474584 CARD9Q9H257 536 aa15.27■□□□□ 0.04
RPGR-206ENST00000474584 DPH5Q9H2P9 285 aa15.27■□□□□ 0.04
RPGR-206ENST00000474584 SEL1LQ9UBV2 794 aa15.27■□□□□ 0.04
RPGR-206ENST00000474584 DAAM1Q9Y4D1 1078 aa15.27■□□□□ 0.04
RPGR-206ENST00000474584 RBBP6Q7Z6E9 1792 aaKnown RBP15.27■□□□□ 0.03
RPGR-206ENST00000474584 TRAPPC3O43617 180 aa15.27■□□□□ 0.03
RPGR-206ENST00000474584 NDUFB10O96000 172 aa15.27■□□□□ 0.03
RPGR-206ENST00000474584 CACNB3P54284 484 aa15.27■□□□□ 0.03
RPGR-206ENST00000474584 EIF3BP55884 814 aaKnown RBP15.27■□□□□ 0.03
RPGR-206ENST00000474584 IFFO1Q0D2I5 559 aa15.27■□□□□ 0.03
RPGR-206ENST00000474584 PRPF4BQ13523 1007 aaKnown RBP15.27■□□□□ 0.03
RPGR-206ENST00000474584 CTTNQ14247 550 aaKnown RBP15.27■□□□□ 0.03
RPGR-206ENST00000474584 SPDYCQ5MJ68 293 aa15.27■□□□□ 0.03
RPGR-206ENST00000474584 CYP2W1Q8TAV3 490 aa15.27■□□□□ 0.03
RPGR-206ENST00000474584 USP21Q9UK80 565 aa15.27■□□□□ 0.03
RPGR-206ENST00000474584 DDTLA6NHG4 134 aaPredicted RBP15.26■□□□□ 0.03
RPGR-206ENST00000474584 GUCY2CP25092 1073 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 FNTAP49354 379 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 SETQ01105 290 aaPredicted RBP15.26■□□□□ 0.03
RPGR-206ENST00000474584 DR1Q01658 176 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 IFT88Q13099 833 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 DRP2Q13474 957 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 PPP2R5AQ15172 486 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 ZC2HC1CQ53FD0 456 aaPredicted RBP15.26■□□□□ 0.03
RPGR-206ENST00000474584 TATDN1Q6P1N9 297 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 ARMC9Q7Z3E5 817 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 TPH2Q8IWU9 490 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 FAM178BQ8IXR5 827 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 CABS1Q96KC9 395 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 HSD17B14Q9BPX1 270 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 BCAS3Q9H6U6 928 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 SEPT11Q9NVA2 429 aaKnown RBP15.26■□□□□ 0.03
RPGR-206ENST00000474584 APEX2Q9UBZ4 518 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 PPP1R9AQ9ULJ8 1098 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 NOVA2Q9UNW9 492 aaKnown RBP15.26■□□□□ 0.03
RPGR-206ENST00000474584 FRMPD4Q14CM0 1322 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 PIK3CDO00329 1044 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 DDX3YO15523 660 aaKnown RBP15.26■□□□□ 0.03
RPGR-206ENST00000474584 BMP3P12645 472 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 TNFAIP3P21580 790 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 RFX1P22670 979 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 MYL7Q01449 175 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 POU5F1Q01860 360 aaKnown RBP15.26■□□□□ 0.03
RPGR-206ENST00000474584 PPATQ06203 517 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 PLCB4Q15147 1175 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 ABCB5Q2M3G0 1257 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 LRCH2Q5VUJ6 765 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 KCNV1Q6PIU1 500 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 C1orf186Q6ZWK4 172 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 SIAH1Q8IUQ4 282 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 OLIG1Q8TAK6 271 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 IPO4Q8TEX9 1081 aaKnown RBP15.26■□□□□ 0.03
RPGR-206ENST00000474584 CEP89Q96ST8 783 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 PSMD1Q99460 953 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 TRIM51Q9BSJ1 452 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 TRIM31Q9BZY9 425 aa15.26■□□□□ 0.03
RPGR-206ENST00000474584 INTS2Q9H0H0 1204 aaKnown RBP15.26■□□□□ 0.03
RPGR-206ENST00000474584 IGSF9BQ9UPX0 1349 aa15.25■□□□□ 0.03
RPGR-206ENST00000474584 IGLV3-22A0A075B6J6 115 aa15.25■□□□□ 0.03
RPGR-206ENST00000474584 CHMP2AO43633 222 aa15.25■□□□□ 0.03
RPGR-206ENST00000474584 PPFIA2O75334 1257 aa15.25■□□□□ 0.03
RPGR-206ENST00000474584 PAEPP09466 180 aa15.25■□□□□ 0.03
RPGR-206ENST00000474584 CYP2J2P51589 502 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms