RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 LXNQ9BS40 222 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 SUCLA2Q9P2R7 463 aaPredicted RBP12.53□□□□□ -0.4
CKS1B-206ENST00000474215 THEGQ9P2T0 379 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 PPME1Q9Y570 386 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 PCDHB7Q9Y5E2 793 aa12.53□□□□□ -0.4
CKS1B-206ENST00000474215 COL4A6Q14031 1691 aa12.52□□□□□ -0.4
CKS1B-206ENST00000474215 MYO9BQ13459 2157 aa12.52□□□□□ -0.4
CKS1B-206ENST00000474215 C9IYK1 514 aa12.52□□□□□ -0.41
CKS1B-206ENST00000474215 RB1P06400 928 aa12.52□□□□□ -0.41
CKS1B-206ENST00000474215 LINC00271P0C7V0 271 aa12.52□□□□□ -0.41
CKS1B-206ENST00000474215 YWHABP31946 246 aaKnown RBP12.52□□□□□ -0.41
CKS1B-206ENST00000474215 MCM7P33993 719 aa12.52□□□□□ -0.41
CKS1B-206ENST00000474215 CYP4A11Q02928 519 aa12.52□□□□□ -0.41
CKS1B-206ENST00000474215 GPM6BQ13491 265 aa12.52□□□□□ -0.41
CKS1B-206ENST00000474215 CTTNQ14247 550 aaKnown RBP12.52□□□□□ -0.41
CKS1B-206ENST00000474215 DSC3Q14574 896 aa12.52□□□□□ -0.41
CKS1B-206ENST00000474215 SKIV2LQ15477 1246 aaKnown RBP12.52□□□□□ -0.41
CKS1B-206ENST00000474215 TPH2Q8IWU9 490 aa12.52□□□□□ -0.41
CKS1B-206ENST00000474215 CMTR2Q8IYT2 770 aaKnown RBP12.52□□□□□ -0.41
CKS1B-206ENST00000474215 SLC7A3Q8WY07 619 aa12.52□□□□□ -0.41
CKS1B-206ENST00000474215 CLP1Q92989 425 aaKnown RBP12.52□□□□□ -0.41
CKS1B-206ENST00000474215 TBC1D32Q96NH3 1257 aa12.52□□□□□ -0.41
CKS1B-206ENST00000474215 ASB2Q96Q27 587 aa12.52□□□□□ -0.41
CKS1B-206ENST00000474215 HSD17B14Q9BPX1 270 aa12.52□□□□□ -0.41
CKS1B-206ENST00000474215 EIF2AK1Q9BQI3 630 aaKnown RBP12.52□□□□□ -0.41
CKS1B-206ENST00000474215 GCOM2Q9BZD3 368 aaPredicted RBP12.52□□□□□ -0.41
CKS1B-206ENST00000474215 RWDD3Q9Y3V2 267 aa12.52□□□□□ -0.41
CKS1B-206ENST00000474215 C5orf67F2Z3F1 127 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 ZBTB39O15060 712 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 LYPLA2O95372 231 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 ZSCAN20P17040 1043 aaPredicted RBP12.51□□□□□ -0.41
CKS1B-206ENST00000474215 IBSPP21815 317 aaPredicted RBP12.51□□□□□ -0.41
CKS1B-206ENST00000474215 CTNNB1P35222 781 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 RFC5P40937 340 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 POLGP54098 1239 aaPredicted RBP12.51□□□□□ -0.41
CKS1B-206ENST00000474215 MRPS5P82675 430 aaKnown RBP12.51□□□□□ -0.41
CKS1B-206ENST00000474215 GNL2Q13823 731 aaKnown RBP12.51□□□□□ -0.41
CKS1B-206ENST00000474215 ZNF174Q15697 407 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 PTPROQ16827 1216 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 XKR9Q5GH70 373 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 TJAP1Q5JTD0 557 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 RHPN2Q8IUC4 686 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 NOSTRINQ8IVI9 506 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 NEK9Q8TD19 979 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 PRPF31Q8WWY3 499 aaKnown RBP12.51□□□□□ -0.41
CKS1B-206ENST00000474215 MRPL38Q96DV4 380 aaKnown RBP12.51□□□□□ -0.41
CKS1B-206ENST00000474215 TMX3Q96JJ7 454 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 C11orf84Q9BUA3 381 aaPredicted RBP12.51□□□□□ -0.41
CKS1B-206ENST00000474215 COL25A1Q9BXS0 654 aaPredicted RBP12.51□□□□□ -0.41
CKS1B-206ENST00000474215 TMEM60Q9H2L4 133 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 DHX33Q9H6R0 707 aaKnown RBP12.51□□□□□ -0.41
CKS1B-206ENST00000474215 TMEM161AQ9NX61 479 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 KIF3AQ9Y496 699 aa12.51□□□□□ -0.41
CKS1B-206ENST00000474215 TTC3P53804 2025 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 EVPLQ92817 2033 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 A0A087WZ62 844 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 CSDE1O75534 798 aaKnown RBP12.5□□□□□ -0.41
CKS1B-206ENST00000474215 U2AF2P26368 475 aaKnown RBP eCLIP12.5□□□□□ -0.41
CKS1B-206ENST00000474215 TRAPPC10P48553 1259 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 MCM2P49736 904 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 GATMP50440 423 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 ORC2Q13416 577 aaPredicted RBP12.5□□□□□ -0.41
CKS1B-206ENST00000474215 PAN2Q504Q3 1202 aaKnown RBP12.5□□□□□ -0.41
CKS1B-206ENST00000474215 ZNF410Q86VK4 478 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 KSR1Q8IVT5 923 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 SYMPKQ92797 1274 aaKnown RBP12.5□□□□□ -0.41
CKS1B-206ENST00000474215 HLA-CQ95604 372 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 FDXACB1Q9BRP7 624 aaPredicted RBP12.5□□□□□ -0.41
CKS1B-206ENST00000474215 PLVAPQ9BX97 442 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 INO80BQ9C086 356 aaPredicted RBP12.5□□□□□ -0.41
CKS1B-206ENST00000474215 ELAC1Q9H777 363 aaKnown RBP12.5□□□□□ -0.41
CKS1B-206ENST00000474215 ATP6V0A4Q9HBG4 840 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 ANKEF1Q9NU02 776 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 COG5Q9UP83 839 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 MRPL42Q9Y6G3 142 aaKnown RBP12.5□□□□□ -0.41
CKS1B-206ENST00000474215 WDR81Q562E7 1941 aa12.5□□□□□ -0.41
CKS1B-206ENST00000474215 GAS2O43903 313 aaKnown RBP12.49□□□□□ -0.41
CKS1B-206ENST00000474215 CD2BP2O95400 341 aaKnown RBP12.49□□□□□ -0.41
CKS1B-206ENST00000474215 XRCC6P12956 609 aaKnown RBP eCLIP12.49□□□□□ -0.41
CKS1B-206ENST00000474215 FGFR4P22455 802 aa12.49□□□□□ -0.41
CKS1B-206ENST00000474215 AAK1Q2M2I8 961 aa12.49□□□□□ -0.41
CKS1B-206ENST00000474215 TTC38Q5R3I4 469 aa12.49□□□□□ -0.41
CKS1B-206ENST00000474215 FAM102BQ5T8I3 360 aa12.49□□□□□ -0.41
CKS1B-206ENST00000474215 TCP11Q8WWU5 503 aa12.49□□□□□ -0.41
CKS1B-206ENST00000474215 PSPC1Q8WXF1 523 aaKnown RBP12.49□□□□□ -0.41
CKS1B-206ENST00000474215 TMEM143Q96AN5 459 aa12.49□□□□□ -0.41
CKS1B-206ENST00000474215 CHST12Q9NRB3 414 aa12.49□□□□□ -0.41
CKS1B-206ENST00000474215 NOL7Q9UMY1 257 aaKnown RBP12.49□□□□□ -0.41
CKS1B-206ENST00000474215 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
CKS1B-206ENST00000474215 PRRC2BQ5JSZ5 2229 aaKnown RBP12.48□□□□□ -0.41
CKS1B-206ENST00000474215 A0A0U1RQF3 1178 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 POTEMA6NI47 508 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 TBKBP1A7MCY6 615 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 GRM6O15303 877 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 ASAP2O43150 1006 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 EOMESO95936 686 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 OR52Z1P0C646 297 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 SRGAP2CP0DJJ0 459 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 SPATA31C1P0DKV0 1188 aa12.48□□□□□ -0.41
CKS1B-206ENST00000474215 SFPQP23246 707 aaKnown RBP eCLIP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms