RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 ATP11BQ9Y2G3 1177 aa11.53□□□□□ -0.56
CASC3-204ENST00000474190 ADGRA3Q8IWK6 1321 aa11.53□□□□□ -0.56
CASC3-204ENST00000474190 ARHGEF35A5YM69 484 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 MAGEB2O15479 319 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 VTNP04004 478 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 EDN1P05305 212 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 IQCF3P0C7M6 154 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 CKBP12277 381 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 STAT6P42226 847 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 TBC1D8BQ0IIM8 1120 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 CUL4BQ13620 913 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 ZNF618Q5T7W0 954 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 TAS1R3Q7RTX0 852 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 GPBP1Q86WP2 473 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 SPATA20Q8TB22 786 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 PRPF31Q8WWY3 499 aaKnown RBP11.52□□□□□ -0.57
CASC3-204ENST00000474190 DDX12PQ92771 950 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 C7orf25Q9BPX7 421 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 REEP2Q9BRK0 252 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 CUEDC2Q9H467 287 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 ATP6V0A4Q9HBG4 840 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 IFT122Q9HBG6 1241 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 DACT1Q9NYF0 836 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 FAM13BQ9NYF5 915 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 CCDC39Q9UFE4 941 aa11.52□□□□□ -0.57
CASC3-204ENST00000474190 LAMA2P24043 3122 aaKnown RBP11.51□□□□□ -0.57
CASC3-204ENST00000474190 SFI1A8K8P3 1242 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 HIP1RO75146 1068 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 GPC3P51654 580 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 RAD51AP2Q09MP3 1159 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 DPYDQ12882 1025 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 CAPSQ13938 189 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 DHX8Q14562 1220 aaKnown RBP11.51□□□□□ -0.57
CASC3-204ENST00000474190 TAF2Q6P1X5 1199 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 ELOA2Q8IYF1 753 aaPredicted RBP11.51□□□□□ -0.57
CASC3-204ENST00000474190 GLIS3Q8NEA6 775 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 ERCC4Q92889 916 aaPredicted RBP11.51□□□□□ -0.57
CASC3-204ENST00000474190 KCNN1Q92952 543 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 CDK5RAP3Q96JB5 506 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 ZNF668Q96K58 619 aaPredicted RBP11.51□□□□□ -0.57
CASC3-204ENST00000474190 TIGD1Q96MW7 591 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 GBP4Q96PP9 640 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 STRA6Q9BX79 667 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 FAM49AQ9H0Q0 323 aaPredicted RBP11.51□□□□□ -0.57
CASC3-204ENST00000474190 POLR3FQ9H1D9 316 aaPredicted RBP11.51□□□□□ -0.57
CASC3-204ENST00000474190 BLZF1Q9H2G9 400 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 TNMDQ9H2S6 317 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 PRO3102Q9H379 93 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 MINDY3Q9H8M7 445 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 SUGCTQ9HAC7 445 aa11.51□□□□□ -0.57
CASC3-204ENST00000474190 SUCLA2Q9P2R7 463 aaPredicted RBP11.51□□□□□ -0.57
CASC3-204ENST00000474190 ALPK3Q96L96 1907 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 TTLL13PA6NNM8 815 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 PITPNM1O00562 1244 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 SOX1O00570 391 aaPredicted RBP11.5□□□□□ -0.57
CASC3-204ENST00000474190 NBNO60934 754 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 CLTBP09497 229 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 GNAT1P11488 350 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 TXLNAP40222 546 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 SARSP49591 514 aaKnown RBP11.5□□□□□ -0.57
CASC3-204ENST00000474190 POLGP54098 1239 aaPredicted RBP11.5□□□□□ -0.57
CASC3-204ENST00000474190 TMEM62Q0P6H9 643 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 LAMTOR4Q0VGL1 99 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 AMHR2Q16671 573 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 CSPP1Q1MSJ5 1256 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 IER5Q5VY09 327 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 CDCA2Q69YH5 1023 aaPredicted RBP11.5□□□□□ -0.57
CASC3-204ENST00000474190 SV2BQ7L1I2 683 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 C16orf59Q7L2K0 433 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 MAEAQ7L5Y9 396 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 IFNLR1Q8IU57 520 aaPredicted RBP11.5□□□□□ -0.57
CASC3-204ENST00000474190 METTL13Q8N6R0 699 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 SLC7A3Q8WY07 619 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 NTPCRQ9BSD7 190 aaKnown RBP11.5□□□□□ -0.57
CASC3-204ENST00000474190 KIFC3Q9BVG8 833 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 AGO3Q9H9G7 860 aaKnown RBP11.5□□□□□ -0.57
CASC3-204ENST00000474190 KCND2Q9NZV8 630 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 USP25Q9UHP3 1055 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 MROH7Q68CQ1 1323 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 WDR81Q562E7 1941 aa11.5□□□□□ -0.57
CASC3-204ENST00000474190 DCDC2CA8MYV0 355 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 GAS2O43903 313 aaKnown RBP11.49□□□□□ -0.57
CASC3-204ENST00000474190 CAND2O75155 1236 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 CSDE1O75534 798 aaKnown RBP11.49□□□□□ -0.57
CASC3-204ENST00000474190 PPP1R37O75864 691 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 SSBP05455 408 aaKnown RBP eCLIP11.49□□□□□ -0.57
CASC3-204ENST00000474190 BMP6P22004 513 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 CYP2C18P33260 490 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 HOXD13P35453 343 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 AFMP43652 599 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 NPTX2P47972 431 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 CASP5P51878 434 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 EPHB4P54760 987 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 MRPS6P82932 125 aaKnown RBP11.49□□□□□ -0.57
CASC3-204ENST00000474190 KIZQ2M2Z5 673 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 FAM102BQ5T8I3 360 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 DYMQ7RTS9 669 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 NME8Q8N427 588 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 MCPH1Q8NEM0 835 aa11.49□□□□□ -0.57
CASC3-204ENST00000474190 CAGE1Q8TC20 777 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms