RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	ESPNL	Q6ZVH7	1005 aa		6.22	□□□□□ -1.41
BBX-223	ENST00000473542	NOL8	Q76FK4	1167 aa	Known RBP	6.22	□□□□□ -1.41
BBX-223	ENST00000473542	LIMS2	Q7Z4I7	341 aa		6.22	□□□□□ -1.41
BBX-223	ENST00000473542	RTN4RL1	Q86UN2	441 aa	Predicted RBP	6.22	□□□□□ -1.41
BBX-223	ENST00000473542	RAVER1	Q8IY67	606 aa	Known RBP	6.22	□□□□□ -1.41
BBX-223	ENST00000473542		Q8N1X5	172 aa		6.22	□□□□□ -1.41
BBX-223	ENST00000473542	FAM26E	Q8N5C1	309 aa		6.22	□□□□□ -1.41
BBX-223	ENST00000473542	FOXRED1	Q96CU9	486 aa	Predicted RBP	6.22	□□□□□ -1.41
BBX-223	ENST00000473542	HOOK2	Q96ED9	719 aa		6.22	□□□□□ -1.41
BBX-223	ENST00000473542	FAXDC2	Q96IV6	333 aa		6.22	□□□□□ -1.41
BBX-223	ENST00000473542	GBP4	Q96PP9	640 aa		6.22	□□□□□ -1.41
BBX-223	ENST00000473542	FOXB1	Q99853	325 aa		6.22	□□□□□ -1.41
BBX-223	ENST00000473542	PCDH18	Q9HCL0	1135 aa		6.22	□□□□□ -1.41
BBX-223	ENST00000473542	BTBD7	Q9P203	1132 aa		6.22	□□□□□ -1.41
BBX-223	ENST00000473542	UBA6	A0AVT1	1052 aa	Predicted RBP	6.21	□□□□□ -1.42
BBX-223	ENST00000473542	GOLGA8A	A7E2F4	631 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	GOLGA8B	A8MQT2	603 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	LRG1	P02750	347 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	U2AF1L5	P0DN76	240 aa	Predicted RBP	6.21	□□□□□ -1.42
BBX-223	ENST00000473542	MYBL2	P10244	700 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	THBS2	P35442	1172 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	IARS	P41252	1262 aa	Known RBP	6.21	□□□□□ -1.42
BBX-223	ENST00000473542	RECQL	P46063	649 aa	Predicted RBP	6.21	□□□□□ -1.42
BBX-223	ENST00000473542	GPR3	P46089	330 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	U2AF1	Q01081	240 aa	Known RBP eCLIP	6.21	□□□□□ -1.42
BBX-223	ENST00000473542	GRIN1	Q05586	938 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	FSCN1	Q16658	493 aa	Known RBP	6.21	□□□□□ -1.42
BBX-223	ENST00000473542	PTPN21	Q16825	1174 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	ABCB5	Q2M3G0	1257 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	TTC38	Q5R3I4	469 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	NXN	Q6DKJ4	435 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	TEPP	Q6URK8	271 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	SPRED1	Q7Z699	444 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	TTC9B	Q8N6N2	239 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	C7orf31	Q8N865	590 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	ZNF496	Q96IT1	587 aa	Predicted RBP	6.21	□□□□□ -1.42
BBX-223	ENST00000473542	CCDC136	Q96JN2	1154 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	C11orf84	Q9BUA3	381 aa	Predicted RBP	6.21	□□□□□ -1.42
BBX-223	ENST00000473542	ZIM2	Q9NZV7	527 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	SRRD	Q9UH36	339 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	MSRA	Q9UJ68	235 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	MRFAP1	Q9Y605	127 aa		6.21	□□□□□ -1.42
BBX-223	ENST00000473542	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	6.2	□□□□□ -1.42
BBX-223	ENST00000473542	SNUPN	O95149	360 aa	Known RBP	6.2	□□□□□ -1.42
BBX-223	ENST00000473542	MME	P08473	750 aa		6.2	□□□□□ -1.42
BBX-223	ENST00000473542	CYP2C8	P10632	490 aa		6.2	□□□□□ -1.42
BBX-223	ENST00000473542	PDCD1	Q15116	288 aa		6.2	□□□□□ -1.42
BBX-223	ENST00000473542	CD276	Q5ZPR3	534 aa		6.2	□□□□□ -1.42
BBX-223	ENST00000473542	MCTP2	Q6DN12	878 aa		6.2	□□□□□ -1.42
BBX-223	ENST00000473542	TIGD7	Q6NT04	549 aa	Predicted RBP	6.2	□□□□□ -1.42
BBX-223	ENST00000473542	ZC3H18	Q86VM9	953 aa	Known RBP	6.2	□□□□□ -1.42
BBX-223	ENST00000473542	CXorf67	Q86X51	503 aa	Predicted RBP	6.2	□□□□□ -1.42
BBX-223	ENST00000473542	AMOTL1	Q8IY63	956 aa		6.2	□□□□□ -1.42
BBX-223	ENST00000473542	CHPF	Q8IZ52	775 aa		6.2	□□□□□ -1.42
BBX-223	ENST00000473542	RSAD2	Q8WXG1	361 aa		6.2	□□□□□ -1.42
BBX-223	ENST00000473542	RTF1	Q92541	710 aa	Known RBP	6.2	□□□□□ -1.42
BBX-223	ENST00000473542	SORCS2	Q96PQ0	1159 aa		6.2	□□□□□ -1.42
BBX-223	ENST00000473542	MAF	O75444	373 aa	Predicted RBP	6.19	□□□□□ -1.42
BBX-223	ENST00000473542	SCGB1D2	O95969	90 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	PRL	P01236	227 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	SLPI	P03973	132 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	ENO2	P09104	434 aa	Predicted RBP	6.19	□□□□□ -1.42
BBX-223	ENST00000473542	C6	P13671	934 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	VCAM1	P19320	739 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	ENPP1	P22413	925 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	PTGS1	P23219	599 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	CCND1	P24385	295 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	RPL13	P26373	211 aa	Known RBP	6.19	□□□□□ -1.42
BBX-223	ENST00000473542	SCAND1	P57086	179 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	NKX3-2	P78367	333 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	ALDH6A1	Q02252	535 aa	Known RBP	6.19	□□□□□ -1.42
BBX-223	ENST00000473542	CDSN	Q15517	529 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	PGM2L1	Q6PCE3	622 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	KANSL1	Q7Z3B3	1105 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	TCEAL8	Q8IYN2	117 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	HIPK4	Q8NE63	616 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	CALML6	Q8TD86	181 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	6.19	□□□□□ -1.42
BBX-223	ENST00000473542	NUP88	Q99567	741 aa	Predicted RBP	6.19	□□□□□ -1.42
BBX-223	ENST00000473542	RTFDC1	Q9BY42	306 aa	Predicted RBP	6.19	□□□□□ -1.42
BBX-223	ENST00000473542	MKS1	Q9NXB0	559 aa		6.19	□□□□□ -1.42
BBX-223	ENST00000473542	PNMA8B	Q9ULN7	279 aa	Predicted RBP	6.19	□□□□□ -1.42
BBX-223	ENST00000473542	MROH6	A6NGR9	719 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	ZNF839	A8K0R7	811 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	KIF3B	O15066	747 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	MT-CO1	P00395	513 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	MTHFD2	P13995	350 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	MANF	P55145	182 aa	Known RBP	6.18	□□□□□ -1.42
BBX-223	ENST00000473542	ROM1	Q03395	351 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	HLTF	Q14527	1009 aa	Known RBP eCLIP	6.18	□□□□□ -1.42
BBX-223	ENST00000473542	CR1L	Q2VPA4	569 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	FAM102B	Q5T8I3	360 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	CXorf57	Q6NSI4	855 aa	Known RBP	6.18	□□□□□ -1.42
BBX-223	ENST00000473542	PROSER1	Q86XN7	944 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	CPA6	Q8N4T0	437 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	IGDCC4	Q8TDY8	1250 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	RAX2	Q96IS3	184 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	RHOBTB2	Q9BYZ6	727 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	MS4A5	Q9H3V2	200 aa		6.18	□□□□□ -1.42
BBX-223	ENST00000473542	CCM2L	Q9NUG4	571 aa	Predicted RBP	6.18	□□□□□ -1.42

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