RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 CSDE1O75534 798 aaKnown RBP16.55■□□□□ 0.24
SSR4-208ENST00000471880 CSPG5O95196 566 aa16.55■□□□□ 0.24
SSR4-208ENST00000471880 STBD1O95210 358 aa16.55■□□□□ 0.24
SSR4-208ENST00000471880 ZSCAN20P17040 1043 aaPredicted RBP16.55■□□□□ 0.24
SSR4-208ENST00000471880 GPC3P51654 580 aa16.55■□□□□ 0.24
SSR4-208ENST00000471880 HTRA4P83105 476 aaPredicted RBP16.55■□□□□ 0.24
SSR4-208ENST00000471880 SPIRE1Q08AE8 756 aa16.55■□□□□ 0.24
SSR4-208ENST00000471880 GRB10Q13322 594 aa16.55■□□□□ 0.24
SSR4-208ENST00000471880 TARBP2Q15633 366 aaKnown RBP16.55■□□□□ 0.24
SSR4-208ENST00000471880 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.55■□□□□ 0.24
SSR4-208ENST00000471880 C4orf19Q8IY42 314 aa16.55■□□□□ 0.24
SSR4-208ENST00000471880 ZNF579Q8NAF0 562 aaKnown RBP16.55■□□□□ 0.24
SSR4-208ENST00000471880 RNF169Q8NCN4 708 aa16.55■□□□□ 0.24
SSR4-208ENST00000471880 GCOM2Q9BZD3 368 aaPredicted RBP16.55■□□□□ 0.24
SSR4-208ENST00000471880 TMX1Q9H3N1 280 aa16.55■□□□□ 0.24
SSR4-208ENST00000471880 PCDHB7Q9Y5E2 793 aa16.55■□□□□ 0.24
SSR4-208ENST00000471880 TCF20Q9UGU0 1960 aaKnown RBP16.55■□□□□ 0.24
SSR4-208ENST00000471880 ADGRA3Q8IWK6 1321 aa16.54■□□□□ 0.24
SSR4-208ENST00000471880 A0A087WZ62 844 aa16.54■□□□□ 0.24
SSR4-208ENST00000471880 ZBTB39O15060 712 aa16.54■□□□□ 0.24
SSR4-208ENST00000471880 MGEA5O60502 916 aa16.54■□□□□ 0.24
SSR4-208ENST00000471880 EIF4BP23588 611 aaKnown RBP16.54■□□□□ 0.24
SSR4-208ENST00000471880 CTNNB1P35222 781 aa16.54■□□□□ 0.24
SSR4-208ENST00000471880 SPOUT1Q5T280 376 aaKnown RBP16.54■□□□□ 0.24
SSR4-208ENST00000471880 RTN4RL1Q86UN2 441 aaPredicted RBP16.54■□□□□ 0.24
SSR4-208ENST00000471880 NPAS4Q8IUM7 802 aa16.54■□□□□ 0.24
SSR4-208ENST00000471880 KSR1Q8IVT5 923 aa16.54■□□□□ 0.24
SSR4-208ENST00000471880 LINC01465Q8N7H1 131 aa16.54■□□□□ 0.24
SSR4-208ENST00000471880 ERMNQ8TAM6 284 aa16.54■□□□□ 0.24
SSR4-208ENST00000471880 NEK9Q8TD19 979 aa16.54■□□□□ 0.24
SSR4-208ENST00000471880 TMEM143Q96AN5 459 aa16.54■□□□□ 0.24
SSR4-208ENST00000471880 MTMR9Q96QG7 549 aa16.54■□□□□ 0.24
SSR4-208ENST00000471880 FDXACB1Q9BRP7 624 aaPredicted RBP16.54■□□□□ 0.24
SSR4-208ENST00000471880 TSPYL2Q9H2G4 693 aaPredicted RBP16.54■□□□□ 0.24
SSR4-208ENST00000471880 FNDC1Q4ZHG4 1894 aaPredicted RBP16.54■□□□□ 0.24
SSR4-208ENST00000471880 VCANP13611 3396 aa16.54■□□□□ 0.24
SSR4-208ENST00000471880 A0A087WWV3 80 aa16.53■□□□□ 0.24
SSR4-208ENST00000471880 LPXNO60711 386 aa16.53■□□□□ 0.24
SSR4-208ENST00000471880 SLITRK3O94933 977 aa16.53■□□□□ 0.24
SSR4-208ENST00000471880 SRGAP2CP0DJJ0 459 aa16.53■□□□□ 0.24
SSR4-208ENST00000471880 RFC5P40937 340 aa16.53■□□□□ 0.24
SSR4-208ENST00000471880 TRAPPC10P48553 1259 aa16.53■□□□□ 0.24
SSR4-208ENST00000471880 GATMP50440 423 aa16.53■□□□□ 0.24
SSR4-208ENST00000471880 ERVK-21P61565 698 aa16.53■□□□□ 0.24
SSR4-208ENST00000471880 EMC2Q15006 297 aa16.53■□□□□ 0.24
SSR4-208ENST00000471880 LARP1BQ659C4 914 aaKnown RBP16.53■□□□□ 0.24
SSR4-208ENST00000471880 PIGOQ8TEQ8 1089 aa16.53■□□□□ 0.24
SSR4-208ENST00000471880 ADAMTS10Q9H324 1103 aa16.53■□□□□ 0.24
SSR4-208ENST00000471880 C1orf112Q9NSG2 853 aa16.53■□□□□ 0.24
SSR4-208ENST00000471880 FOXD4L1Q9NU39 408 aa16.53■□□□□ 0.24
SSR4-208ENST00000471880 VPS37CA5D8V6 355 aaPredicted RBP16.52■□□□□ 0.24
SSR4-208ENST00000471880 DARSP14868 501 aaKnown RBP16.52■□□□□ 0.24
SSR4-208ENST00000471880 U2AF2P26368 475 aaKnown RBP eCLIP16.52■□□□□ 0.245e-15■■■□□ 14.8
SSR4-208ENST00000471880 SARSP49591 514 aaKnown RBP16.52■□□□□ 0.24
SSR4-208ENST00000471880 CDC42EP1Q00587 391 aa16.52■□□□□ 0.24
SSR4-208ENST00000471880 ORC2Q13416 577 aaPredicted RBP16.52■□□□□ 0.24
SSR4-208ENST00000471880 EPC2Q52LR7 807 aa16.52■□□□□ 0.24
SSR4-208ENST00000471880 TMEM192Q8IY95 271 aa16.52■□□□□ 0.24
SSR4-208ENST00000471880 EXOC8Q8IYI6 725 aa16.52■□□□□ 0.24
SSR4-208ENST00000471880 ZNF710Q8N1W2 664 aa16.52■□□□□ 0.24
SSR4-208ENST00000471880 PSPC1Q8WXF1 523 aaKnown RBP16.52■□□□□ 0.24
SSR4-208ENST00000471880 MTRQ99707 1265 aa16.52■□□□□ 0.24
SSR4-208ENST00000471880 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.24
SSR4-208ENST00000471880 PCDHB6Q9Y5E3 794 aa16.52■□□□□ 0.24
SSR4-208ENST00000471880 COL4A3BPQ9Y5P4 624 aa16.52■□□□□ 0.24
SSR4-208ENST00000471880 NCOR1O75376 2440 aa16.52■□□□□ 0.24
SSR4-208ENST00000471880 SFPQP23246 707 aaKnown RBP eCLIP16.51■□□□□ 0.23
SSR4-208ENST00000471880 GPM6BQ13491 265 aa16.51■□□□□ 0.23
SSR4-208ENST00000471880 SLC24A5Q71RS6 500 aa16.51■□□□□ 0.23
SSR4-208ENST00000471880 MAEAQ7L5Y9 396 aa16.51■□□□□ 0.23
SSR4-208ENST00000471880 CATSPER4Q7RTX7 472 aa16.51■□□□□ 0.23
SSR4-208ENST00000471880 SP7Q8TDD2 431 aaPredicted RBP16.51■□□□□ 0.23
SSR4-208ENST00000471880 TCP11Q8WWU5 503 aa16.51■□□□□ 0.23
SSR4-208ENST00000471880 PRPF31Q8WWY3 499 aaKnown RBP16.51■□□□□ 0.23
SSR4-208ENST00000471880 SAMD11Q96NU1 681 aa16.51■□□□□ 0.23
SSR4-208ENST00000471880 CEP89Q96ST8 783 aa16.51■□□□□ 0.23
SSR4-208ENST00000471880 INO80BQ9C086 356 aaPredicted RBP16.51■□□□□ 0.23
SSR4-208ENST00000471880 ATP6V0A4Q9HBG4 840 aa16.51■□□□□ 0.23
SSR4-208ENST00000471880 RGS18Q9NS28 235 aa16.51■□□□□ 0.23
SSR4-208ENST00000471880 MTCH2Q9Y6C9 303 aa16.51■□□□□ 0.23
SSR4-208ENST00000471880 IGKV6-21A0A0C4DH24 114 aa16.5■□□□□ 0.23
SSR4-208ENST00000471880 TBKBP1A7MCY6 615 aa16.5■□□□□ 0.23
SSR4-208ENST00000471880 USO1O60763 962 aaKnown RBP16.5■□□□□ 0.23
SSR4-208ENST00000471880 DGKIO75912 1065 aa16.5■□□□□ 0.23
SSR4-208ENST00000471880 CCT6AP40227 531 aaKnown RBP16.5■□□□□ 0.23
SSR4-208ENST00000471880 PTGDRQ13258 359 aa16.5■□□□□ 0.23
SSR4-208ENST00000471880 ZRSR1Q15695 479 aaKnown RBP16.5■□□□□ 0.23
SSR4-208ENST00000471880 TWF2Q6IBS0 349 aaKnown RBP16.5■□□□□ 0.23
SSR4-208ENST00000471880 POTEGQ6S5H5 508 aa16.5■□□□□ 0.23
SSR4-208ENST00000471880 ZNF410Q86VK4 478 aa16.5■□□□□ 0.23
SSR4-208ENST00000471880 ABI1Q8IZP0 508 aa16.5■□□□□ 0.23
SSR4-208ENST00000471880 HSD17B14Q9BPX1 270 aa16.5■□□□□ 0.23
SSR4-208ENST00000471880 RAB34Q9BZG1 259 aa16.5■□□□□ 0.23
SSR4-208ENST00000471880 DHX33Q9H6R0 707 aaKnown RBP16.5■□□□□ 0.23
SSR4-208ENST00000471880 LRWD1Q9UFC0 647 aa16.5■□□□□ 0.23
SSR4-208ENST00000471880 PIN4Q9Y237 131 aaKnown RBP16.5■□□□□ 0.23
SSR4-208ENST00000471880 PPME1Q9Y570 386 aa16.5■□□□□ 0.23
SSR4-208ENST00000471880 MED24O75448 989 aa16.49■□□□□ 0.23
SSR4-208ENST00000471880 LINC00271P0C7V0 271 aa16.49■□□□□ 0.23
SSR4-208ENST00000471880 FGFR1P11362 822 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms