RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 GLB1LQ6UWU2 654 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 GPR155Q7Z3F1 870 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 PASD1Q8IV76 773 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 OR2W6PQ8NHA6 318 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 MAML3Q96JK9 1138 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 RBM15Q96T37 977 aaKnown RBP eCLIP5.8□□□□□ -1.48
COL9A1-206ENST00000470652 TOMM22Q9NS69 142 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 MAPRE3Q9UPY8 281 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 SLC4A7Q9Y6M7 1214 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 SHROOM2Q13796 1616 aa5.8□□□□□ -1.48
COL9A1-206ENST00000470652 ZNF891A8MT65 544 aaPredicted RBP5.79□□□□□ -1.48
COL9A1-206ENST00000470652 PDE8AO60658 829 aa5.79□□□□□ -1.48
COL9A1-206ENST00000470652 ZNF888P0CJ79 500 aaPredicted RBP5.79□□□□□ -1.48
COL9A1-206ENST00000470652 KPNA1P52294 538 aaPredicted RBP5.79□□□□□ -1.48
COL9A1-206ENST00000470652 ZXDAP98168 799 aa5.79□□□□□ -1.48
COL9A1-206ENST00000470652 SLC6A3Q01959 620 aa5.79□□□□□ -1.48
COL9A1-206ENST00000470652 SLFN13Q68D06 897 aa5.79□□□□□ -1.48
COL9A1-206ENST00000470652 SMC1BQ8NDV3 1235 aa5.79□□□□□ -1.48
COL9A1-206ENST00000470652 CHTF18Q8WVB6 975 aa5.79□□□□□ -1.48
COL9A1-206ENST00000470652 TUBGCP5Q96RT8 1024 aa5.79□□□□□ -1.48
COL9A1-206ENST00000470652 SEC61A2Q9H9S3 476 aa5.79□□□□□ -1.48
COL9A1-206ENST00000470652 THG1LQ9NWX6 298 aaKnown RBP5.79□□□□□ -1.48
COL9A1-206ENST00000470652 CDC42EP3Q9UKI2 254 aa5.79□□□□□ -1.48
COL9A1-206ENST00000470652 FHOD3Q2V2M9 1422 aa5.79□□□□□ -1.48
COL9A1-206ENST00000470652 DISP1Q96F81 1524 aa5.79□□□□□ -1.48
COL9A1-206ENST00000470652 ARAP1Q96P48 1450 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 ARHGAP35Q9NRY4 1499 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 RIMBP3CA6NJZ7 1639 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 RIMBP3BA6NNM3 1639 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 RIMBP3Q9UFD9 1639 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 NPEPPSL1A6NEC2 478 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 RGS3P49796 1198 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 MEOX1P50221 254 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 SEPT7Q16181 437 aaKnown RBP5.78□□□□□ -1.48
COL9A1-206ENST00000470652 SAMD9Q5K651 1589 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 CEP162Q5TB80 1403 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 TRIM68Q6AZZ1 485 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 SLFN12LQ6IEE8 588 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 TIGD7Q6NT04 549 aaPredicted RBP5.78□□□□□ -1.48
COL9A1-206ENST00000470652 PHYKPLQ8IUZ5 450 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 LEO1Q8WVC0 666 aaPredicted RBP5.78□□□□□ -1.48
COL9A1-206ENST00000470652 LRRIQ1Q96JM4 1722 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 H2AFY2Q9P0M6 372 aaPredicted RBP5.78□□□□□ -1.48
COL9A1-206ENST00000470652 PPP4R1LQ9P1A2 415 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 KIAA0586Q9BVV6 1533 aa5.78□□□□□ -1.48
COL9A1-206ENST00000470652 KIAA0556O60303 1618 aa5.77□□□□□ -1.48
COL9A1-206ENST00000470652 PRG4Q92954 1404 aaPredicted RBP5.77□□□□□ -1.49
COL9A1-206ENST00000470652 MAFGO15525 162 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 IGSF3O75054 1194 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 CNOT4O95628 575 aaKnown RBP5.77□□□□□ -1.49
COL9A1-206ENST00000470652 CD40P25942 277 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 RRADP55042 308 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 SMAD3P84022 425 aaKnown RBP5.77□□□□□ -1.49
COL9A1-206ENST00000470652 LRRC32Q14392 662 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 GPR158Q5T848 1215 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 PRAMEF9Q5VWM5 478 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 ESRP1Q6NXG1 681 aaKnown RBP5.77□□□□□ -1.49
COL9A1-206ENST00000470652 C11orf74Q86VG3 221 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 RTKN2Q8IZC4 609 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 C7orf31Q8N865 590 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 RPGRQ92834 1020 aaKnown RBP5.77□□□□□ -1.49
COL9A1-206ENST00000470652 SAMD11Q96NU1 681 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 SSBP3Q9BWW4 388 aaPredicted RBP5.77□□□□□ -1.49
COL9A1-206ENST00000470652 SMPD4Q9NXE4 827 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 PTPN22Q9Y2R2 807 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 VWA7Q9Y334 891 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 TNIKQ9UKE5 1360 aa5.77□□□□□ -1.49
COL9A1-206ENST00000470652 ARHGEF11O15085 1522 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 UGGT2Q9NYU1 1516 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 SUV39H1O43463 412 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 TNFRSF1AP19438 455 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 LSSP48449 732 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 BCAR1P56945 870 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 IL2P60568 153 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 RAC3P60763 192 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 ADAM17P78536 824 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 DHCR24Q15392 516 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 USP30Q70CQ3 517 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 LARP4Q71RC2 724 aaKnown RBP eCLIP5.76□□□□□ -1.49
COL9A1-206ENST00000470652 LIMS2Q7Z4I7 341 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 CIR1Q86X95 450 aaPredicted RBP5.76□□□□□ -1.49
COL9A1-206ENST00000470652 GPR101Q96P66 508 aaPredicted RBP5.76□□□□□ -1.49
COL9A1-206ENST00000470652 LMF1Q96S06 567 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 ZMAT4Q9H898 229 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 KCMF1Q9P0J7 381 aa5.76□□□□□ -1.49
COL9A1-206ENST00000470652 SAE1Q9UBE0 346 aaPredicted RBP5.76□□□□□ -1.49
COL9A1-206ENST00000470652 CLIP1P30622 1438 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 FKBP9O95302 570 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 FSHBP01225 129 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 MRE11P49959 708 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 STAT5BP51692 787 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 SESN2P58004 480 aaPredicted RBP5.75□□□□□ -1.49
COL9A1-206ENST00000470652 PHC1P78364 1004 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 ADCY2Q08462 1091 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 NFYCQ13952 458 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 NOLC1Q14978 699 aaKnown RBP eCLIP5.75□□□□□ -1.49
COL9A1-206ENST00000470652 PCOLCEQ15113 449 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 DGKDQ16760 1214 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 AGBL4Q5VU57 503 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 FKBP9P1Q75LS8 142 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms