RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 EPHA7Q15375 998 aa18.38■□□□□ 0.53
GTF3C2-209ENST00000470115 NCAPH2Q6IBW4 605 aa18.38■□□□□ 0.53
GTF3C2-209ENST00000470115 ADAMTS19Q8TE59 1207 aa18.38■□□□□ 0.53
GTF3C2-209ENST00000470115 NLRP7Q8WX94 980 aa18.38■□□□□ 0.53
GTF3C2-209ENST00000470115 ZSCAN31Q96LW9 406 aaPredicted RBP18.38■□□□□ 0.53
GTF3C2-209ENST00000470115 C11orf84Q9BUA3 381 aaPredicted RBP18.38■□□□□ 0.53
GTF3C2-209ENST00000470115 RGL1Q9NZL6 768 aa18.38■□□□□ 0.53
GTF3C2-209ENST00000470115 RALGAPA2Q2PPJ7 1873 aa18.37■□□□□ 0.53
GTF3C2-209ENST00000470115 GRM6O15303 877 aa18.37■□□□□ 0.53
GTF3C2-209ENST00000470115 DKC1O60832 514 aaKnown RBP eCLIP18.37■□□□□ 0.53
GTF3C2-209ENST00000470115 DARSP14868 501 aaKnown RBP18.37■□□□□ 0.53
GTF3C2-209ENST00000470115 FGFR4P22455 802 aa18.37■□□□□ 0.53
GTF3C2-209ENST00000470115 CALCRLQ16602 461 aa18.37■□□□□ 0.53
GTF3C2-209ENST00000470115 FAM102BQ5T8I3 360 aa18.37■□□□□ 0.53
GTF3C2-209ENST00000470115 ZNF579Q8NAF0 562 aaKnown RBP18.37■□□□□ 0.53
GTF3C2-209ENST00000470115 DYDC2Q96IM9 177 aa18.37■□□□□ 0.53
GTF3C2-209ENST00000470115 LLPHQ9BRT6 129 aaKnown RBP18.37■□□□□ 0.53
GTF3C2-209ENST00000470115 CYP26B1Q9NR63 512 aa18.37■□□□□ 0.53
GTF3C2-209ENST00000470115 RNF216Q9NWF9 866 aaPredicted RBP18.37■□□□□ 0.53
GTF3C2-209ENST00000470115 SUCLA2Q9P2R7 463 aaPredicted RBP18.37■□□□□ 0.53
GTF3C2-209ENST00000470115 CDC42EP1Q00587 391 aa18.36■□□□□ 0.53
GTF3C2-209ENST00000470115 SAFBQ15424 915 aaKnown RBP eCLIP18.36■□□□□ 0.53
GTF3C2-209ENST00000470115 TIGD5Q53EQ6 642 aa18.36■□□□□ 0.53
GTF3C2-209ENST00000470115 C8orf76Q96K31 380 aa18.36■□□□□ 0.53
GTF3C2-209ENST00000470115 CEP170P1Q96L14 293 aa18.36■□□□□ 0.53
GTF3C2-209ENST00000470115 LXNQ9BS40 222 aa18.36■□□□□ 0.53
GTF3C2-209ENST00000470115 PLVAPQ9BX97 442 aa18.36■□□□□ 0.53
GTF3C2-209ENST00000470115 UBE2ZQ9H832 354 aaPredicted RBP18.36■□□□□ 0.53
GTF3C2-209ENST00000470115 ATP6V0A4Q9HBG4 840 aa18.36■□□□□ 0.53
GTF3C2-209ENST00000470115 ALG13Q9NP73 1137 aaKnown RBP18.36■□□□□ 0.53
GTF3C2-209ENST00000470115 BRWD1Q9NSI6 2320 aa18.36■□□□□ 0.53
GTF3C2-209ENST00000470115 PCDHA12Q9UN75 941 aa18.36■□□□□ 0.53
GTF3C2-209ENST00000470115 BDP1A6H8Y1 2624 aa18.36■□□□□ 0.53
GTF3C2-209ENST00000470115 A0A087WZ62 844 aa18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 TBKBP1A7MCY6 615 aa18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 ZBTB39O15060 712 aa18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 ZSCAN20P17040 1043 aaPredicted RBP18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 ATP2B1P20020 1258 aa18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 RBM25P49756 843 aaKnown RBP18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 CYP4A11Q02928 519 aa18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 CTTNQ14247 550 aaKnown RBP18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 TCEAL5Q5H9L2 206 aa18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 RHPN2Q8IUC4 686 aa18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 C4orf19Q8IY42 314 aa18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 UHRF1Q96T88 793 aaPredicted RBP18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 JPH2Q9BR39 696 aaPredicted RBP18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 FDXACB1Q9BRP7 624 aaPredicted RBP18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 GCOM2Q9BZD3 368 aaPredicted RBP18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 SH2B1Q9NRF2 756 aaPredicted RBP18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 TMEM161AQ9NX61 479 aa18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 PLAGL2Q9UPG8 496 aa18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 MYO7AQ13402 2215 aa18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 TCF20Q9UGU0 1960 aaKnown RBP18.35■□□□□ 0.53
GTF3C2-209ENST00000470115 NEMFO60524 1076 aa18.34■□□□□ 0.53
GTF3C2-209ENST00000470115 SLITRK3O94933 977 aa18.34■□□□□ 0.53
GTF3C2-209ENST00000470115 FGFR1P11362 822 aa18.34■□□□□ 0.53
GTF3C2-209ENST00000470115 TXKP42681 527 aa18.34■□□□□ 0.53
GTF3C2-209ENST00000470115 KSR1Q8IVT5 923 aa18.34■□□□□ 0.53
GTF3C2-209ENST00000470115 TPH2Q8IWU9 490 aa18.34■□□□□ 0.53
GTF3C2-209ENST00000470115 P2RX5Q93086 422 aa18.34■□□□□ 0.53
GTF3C2-209ENST00000470115 EIF2AK1Q9BQI3 630 aaKnown RBP18.34■□□□□ 0.53
GTF3C2-209ENST00000470115 LMAN2LQ9H0V9 348 aa18.34■□□□□ 0.53
GTF3C2-209ENST00000470115 NSUN3Q9H649 340 aaKnown RBP18.34■□□□□ 0.53
GTF3C2-209ENST00000470115 ELAC1Q9H777 363 aaKnown RBP18.34■□□□□ 0.53
GTF3C2-209ENST00000470115 ZSWIM4Q9H7M6 989 aa18.34■□□□□ 0.53
GTF3C2-209ENST00000470115 TTC12Q9H892 705 aaPredicted RBP18.34■□□□□ 0.53
GTF3C2-209ENST00000470115 TNFRSF10AO00220 468 aa18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 CSPG5O95196 566 aa18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 ITGB1P05556 798 aa18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 YWHABP31946 246 aaKnown RBP18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 MCM7P33993 719 aa18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 POLGP54098 1239 aaPredicted RBP18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 HMGN5P82970 282 aaKnown RBP18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 NAALADL2Q58DX5 795 aa18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 XKR9Q5GH70 373 aa18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 SPOUT1Q5T280 376 aaKnown RBP18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 OTUD6AQ7L8S5 288 aa18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 KLHL23Q8NBE8 558 aa18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 SLC7A3Q8WY07 619 aa18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 NECAB3Q96P71 396 aaPredicted RBP18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 MTMR9Q96QG7 549 aa18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 TMEM60Q9H2L4 133 aa18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 DHX33Q9H6R0 707 aaKnown RBP18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 TYW1Q9NV66 732 aaKnown RBP18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 HCSTQ9UBK5 93 aa18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 MUC3AQ02505 3323 aa18.33■□□□□ 0.52
GTF3C2-209ENST00000470115 KCNA5P22460 613 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 DNAJB1P25685 340 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 CAMK1Q14012 370 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 ZNF410Q86VK4 478 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 ECHDC2Q86YB7 292 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 EXOC8Q8IYI6 725 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 RNF169Q8NCN4 708 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 FBXO18Q8NFZ0 1043 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 SPPL3Q8TCT6 385 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 PRPF31Q8WWY3 499 aaKnown RBP18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 TMEM143Q96AN5 459 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 NLRP4Q96MN2 994 aa18.32■□□□□ 0.52
GTF3C2-209ENST00000470115 HSD17B14Q9BPX1 270 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms