RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 ADAM2Q99965 735 aa15.77■□□□□ 0.12
COMMD3-208ENST00000470045 SH2D3AQ9BRG2 576 aa15.77■□□□□ 0.12
COMMD3-208ENST00000470045 LXNQ9BS40 222 aa15.77■□□□□ 0.12
COMMD3-208ENST00000470045 FOXP1Q9H334 677 aaPredicted RBP15.77■□□□□ 0.12
COMMD3-208ENST00000470045 CYP26B1Q9NR63 512 aa15.77■□□□□ 0.12
COMMD3-208ENST00000470045 RWDD3Q9Y3V2 267 aa15.77■□□□□ 0.12
COMMD3-208ENST00000470045 DDX11L8A8MPP1 907 aa15.76■□□□□ 0.11
COMMD3-208ENST00000470045 MARCH6O60337 910 aa15.76■□□□□ 0.11
COMMD3-208ENST00000470045 BTG3Q14201 252 aaPredicted RBP15.76■□□□□ 0.11
COMMD3-208ENST00000470045 TJAP1Q5JTD0 557 aa15.76■□□□□ 0.11
COMMD3-208ENST00000470045 NCAPH2Q6IBW4 605 aa15.76■□□□□ 0.11
COMMD3-208ENST00000470045 SLC24A5Q71RS6 500 aa15.76■□□□□ 0.11
COMMD3-208ENST00000470045 JPH2Q9BR39 696 aaPredicted RBP15.76■□□□□ 0.11
COMMD3-208ENST00000470045 RGL1Q9NZL6 768 aa15.76■□□□□ 0.11
COMMD3-208ENST00000470045 PCDHA12Q9UN75 941 aa15.76■□□□□ 0.11
COMMD3-208ENST00000470045 DENND3A2RUS2 1198 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 ST18O60284 1047 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 LYPLA2O95372 231 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 RB1P06400 928 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 BMPR1AP36894 532 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 NPEPPSP55786 919 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 FAM189BP81408 668 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 CDC42EP1Q00587 391 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 ORC2Q13416 577 aaPredicted RBP15.75■□□□□ 0.11
COMMD3-208ENST00000470045 ZNF410Q86VK4 478 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 ZNF579Q8NAF0 562 aaKnown RBP15.75■□□□□ 0.11
COMMD3-208ENST00000470045 NEK9Q8TD19 979 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 MRPL38Q96DV4 380 aaKnown RBP15.75■□□□□ 0.11
COMMD3-208ENST00000470045 DYDC2Q96IM9 177 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 TBC1D32Q96NH3 1257 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 HSD17B14Q9BPX1 270 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 TMEM60Q9H2L4 133 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 DHX33Q9H6R0 707 aaKnown RBP15.75■□□□□ 0.11
COMMD3-208ENST00000470045 ELAC1Q9H777 363 aaKnown RBP15.75■□□□□ 0.11
COMMD3-208ENST00000470045 ZSWIM4Q9H7M6 989 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 TTC12Q9H892 705 aaPredicted RBP15.75■□□□□ 0.11
COMMD3-208ENST00000470045 UPF2Q9HAU5 1272 aaKnown RBP15.75■□□□□ 0.11
COMMD3-208ENST00000470045 BRWD1Q9NSI6 2320 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 PLXNA4Q9HCM2 1894 aa15.75■□□□□ 0.11
COMMD3-208ENST00000470045 VCANP13611 3396 aa15.74■□□□□ 0.11
COMMD3-208ENST00000470045 SLITRK3O94933 977 aa15.74■□□□□ 0.11
COMMD3-208ENST00000470045 CD2BP2O95400 341 aaKnown RBP15.74■□□□□ 0.11
COMMD3-208ENST00000470045 YWHABP31946 246 aaKnown RBP15.74■□□□□ 0.11
COMMD3-208ENST00000470045 CTNNB1P35222 781 aa15.74■□□□□ 0.11
COMMD3-208ENST00000470045 RFC5P40937 340 aa15.74■□□□□ 0.11
COMMD3-208ENST00000470045 DNM2P50570 870 aa15.74■□□□□ 0.11
COMMD3-208ENST00000470045 CYP4A11Q02928 519 aa15.74■□□□□ 0.11
COMMD3-208ENST00000470045 GPM6BQ13491 265 aa15.74■□□□□ 0.11
COMMD3-208ENST00000470045 FAM184AQ8NB25 1140 aa15.74■□□□□ 0.11
COMMD3-208ENST00000470045 NLRP7Q8WX94 980 aa15.74■□□□□ 0.11
COMMD3-208ENST00000470045 ZNF668Q96K58 619 aaPredicted RBP15.74■□□□□ 0.11
COMMD3-208ENST00000470045 ASB2Q96Q27 587 aa15.74■□□□□ 0.11
COMMD3-208ENST00000470045 EIF2AK1Q9BQI3 630 aaKnown RBP15.74■□□□□ 0.11
COMMD3-208ENST00000470045 TMEM161AQ9NX61 479 aa15.74■□□□□ 0.11
COMMD3-208ENST00000470045 MRPL42Q9Y6G3 142 aaKnown RBP15.74■□□□□ 0.11
COMMD3-208ENST00000470045 TTC28Q96AY4 2481 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 A0A087WZ62 844 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 GAS2O43903 313 aaKnown RBP15.73■□□□□ 0.11
COMMD3-208ENST00000470045 ATXN8OSP0DMR3 200 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 U2AF2P26368 475 aaKnown RBP eCLIP15.73■□□□□ 0.112e-8■■■□□ 15.6
COMMD3-208ENST00000470045 MCM7P33993 719 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 TXKP42681 527 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 GATMP50440 423 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 MRPS5P82675 430 aaKnown RBP15.73■□□□□ 0.11
COMMD3-208ENST00000470045 CTTNQ14247 550 aaKnown RBP15.73■□□□□ 0.11
COMMD3-208ENST00000470045 PTPROQ16827 1216 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 NOSTRINQ8IVI9 506 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 EXOC8Q8IYI6 725 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 SLC7A3Q8WY07 619 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 SYMPKQ92797 1274 aaKnown RBP15.73■□□□□ 0.11
COMMD3-208ENST00000470045 P2RX5Q93086 422 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 TMX3Q96JJ7 454 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 CEP170P1Q96L14 293 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 SCLT1Q96NL6 688 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 FDXACB1Q9BRP7 624 aaPredicted RBP15.73■□□□□ 0.11
COMMD3-208ENST00000470045 C11orf84Q9BUA3 381 aaPredicted RBP15.73■□□□□ 0.11
COMMD3-208ENST00000470045 PLVAPQ9BX97 442 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 GCOM2Q9BZD3 368 aaPredicted RBP15.73■□□□□ 0.11
COMMD3-208ENST00000470045 LMAN2LQ9H0V9 348 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 SUCLA2Q9P2R7 463 aaPredicted RBP15.73■□□□□ 0.11
COMMD3-208ENST00000470045 LRFN2Q9ULH4 789 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 COG5Q9UP83 839 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 PCDHB7Q9Y5E2 793 aa15.73■□□□□ 0.11
COMMD3-208ENST00000470045 SPTBN5Q9NRC6 3674 aaKnown RBP15.72■□□□□ 0.11
COMMD3-208ENST00000470045 POTEMA6NI47 508 aa15.72■□□□□ 0.11
COMMD3-208ENST00000470045 ZBTB39O15060 712 aa15.72■□□□□ 0.11
COMMD3-208ENST00000470045 PRR29P0C7W0 189 aa15.72■□□□□ 0.11
COMMD3-208ENST00000470045 TRAPPC10P48553 1259 aa15.72■□□□□ 0.11
COMMD3-208ENST00000470045 POLGP54098 1239 aaPredicted RBP15.72■□□□□ 0.11
COMMD3-208ENST00000470045 TIGD5Q53EQ6 642 aa15.72■□□□□ 0.11
COMMD3-208ENST00000470045 OTUD6AQ7L8S5 288 aa15.72■□□□□ 0.11
COMMD3-208ENST00000470045 XIRP2A4UGR9 3374 aa15.72■□□□□ 0.11
COMMD3-208ENST00000470045 OR52Z1P0C646 297 aa15.71■□□□□ 0.11
COMMD3-208ENST00000470045 CD44P16070 742 aaKnown RBP15.71■□□□□ 0.11
COMMD3-208ENST00000470045 FGFR4P22455 802 aa15.71■□□□□ 0.11
COMMD3-208ENST00000470045 TFF2Q03403 129 aa15.71■□□□□ 0.11
COMMD3-208ENST00000470045 COL19A1Q14993 1142 aa15.71■□□□□ 0.11
COMMD3-208ENST00000470045 EMC2Q15006 297 aa15.71■□□□□ 0.11
COMMD3-208ENST00000470045 SKIV2LQ15477 1246 aaKnown RBP15.71■□□□□ 0.11
COMMD3-208ENST00000470045 PAN2Q504Q3 1202 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms