RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 ECHDC2Q86YB7 292 aa17.55■□□□□ 0.4
SRRM1-207ENST00000468822 LINC01465Q8N7H1 131 aa17.55■□□□□ 0.4
SRRM1-207ENST00000468822 C12orf76Q8N812 135 aaPredicted RBP17.55■□□□□ 0.4
SRRM1-207ENST00000468822 MRPL43Q8N983 215 aaKnown RBP17.55■□□□□ 0.4
SRRM1-207ENST00000468822 ZNF558Q96NG5 402 aa17.55■□□□□ 0.4
SRRM1-207ENST00000468822 ADAM7Q9H2U9 754 aa17.55■□□□□ 0.4
SRRM1-207ENST00000468822 IPO5O00410 1097 aaKnown RBP17.54■□□□□ 0.4
SRRM1-207ENST00000468822 CLASP2O75122 1294 aaKnown RBP17.54■□□□□ 0.4
SRRM1-207ENST00000468822 ZNF76P36508 570 aa17.54■□□□□ 0.4
SRRM1-207ENST00000468822 NLRP11P59045 1033 aaKnown RBP17.54■□□□□ 0.4
SRRM1-207ENST00000468822 NECTIN1Q15223 517 aa17.54■□□□□ 0.4
SRRM1-207ENST00000468822 ODR4Q5SWX8 454 aa17.54■□□□□ 0.4
SRRM1-207ENST00000468822 JAKMIP3Q5VZ66 844 aa17.54■□□□□ 0.4
SRRM1-207ENST00000468822 SLC39A11Q8N1S5 342 aa17.54■□□□□ 0.4
SRRM1-207ENST00000468822 LRRC43Q8N309 656 aa17.54■□□□□ 0.4
SRRM1-207ENST00000468822 TCEANC2Q96MN5 208 aa17.54■□□□□ 0.4
SRRM1-207ENST00000468822 FAM217BQ9NTX9 383 aaPredicted RBP17.54■□□□□ 0.4
SRRM1-207ENST00000468822 BARHL2Q9NY43 387 aa17.54■□□□□ 0.4
SRRM1-207ENST00000468822 SPG21Q9NZD8 308 aa17.54■□□□□ 0.4
SRRM1-207ENST00000468822 SORCS3Q9UPU3 1222 aa17.54■□□□□ 0.4
SRRM1-207ENST00000468822 NT5C1B-RDH14C9J2C7 533 aa17.53■□□□□ 0.4
SRRM1-207ENST00000468822 FGFR4P22455 802 aa17.53■□□□□ 0.4
SRRM1-207ENST00000468822 AP3B2Q13367 1082 aa17.53■□□□□ 0.4
SRRM1-207ENST00000468822 MTMR3Q13615 1198 aa17.53■□□□□ 0.4
SRRM1-207ENST00000468822 ZNF598Q86UK7 904 aaKnown RBP17.53■□□□□ 0.4
SRRM1-207ENST00000468822 TMEM173Q86WV6 379 aaPredicted RBP17.53■□□□□ 0.4
SRRM1-207ENST00000468822 CKAP2LQ8IYA6 745 aa17.53■□□□□ 0.4
SRRM1-207ENST00000468822 LRRC71Q8N4P6 559 aa17.53■□□□□ 0.4
SRRM1-207ENST00000468822 RNF169Q8NCN4 708 aa17.53■□□□□ 0.4
SRRM1-207ENST00000468822 BBXQ8WY36 941 aaPredicted RBP17.53■□□□□ 0.4
SRRM1-207ENST00000468822 CASP10Q92851 521 aa17.53■□□□□ 0.4
SRRM1-207ENST00000468822 NR2E1Q9Y466 385 aa17.53■□□□□ 0.4
SRRM1-207ENST00000468822 CACNA1AO00555 2505 aa17.53■□□□□ 0.4
SRRM1-207ENST00000468822 PRR23AA6NEV1 266 aa17.52■□□□□ 0.4
SRRM1-207ENST00000468822 PPM1AP35813 382 aa17.52■□□□□ 0.4
SRRM1-207ENST00000468822 NUBP1P53384 320 aa17.52■□□□□ 0.4
SRRM1-207ENST00000468822 KRT17Q04695 432 aa17.52■□□□□ 0.4
SRRM1-207ENST00000468822 SMC1AQ14683 1233 aaKnown RBP17.52■□□□□ 0.4
SRRM1-207ENST00000468822 UBALD2Q8IYN6 164 aa17.52■□□□□ 0.4
SRRM1-207ENST00000468822 HELQQ8TDG4 1101 aa17.52■□□□□ 0.4
SRRM1-207ENST00000468822 AUTS2Q8WXX7 1259 aa17.52■□□□□ 0.4
SRRM1-207ENST00000468822 IRF2BPLQ9H1B7 796 aa17.52■□□□□ 0.4
SRRM1-207ENST00000468822 HOXA2O43364 376 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 ZNF862O60290 1169 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 CSDE1O75534 798 aaKnown RBP17.51■□□□□ 0.39
SRRM1-207ENST00000468822 CYP3A4P08684 503 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 EIF4BP23588 611 aaKnown RBP17.51■□□□□ 0.39
SRRM1-207ENST00000468822 CDC27P30260 824 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 NBL1P41271 181 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 METAP2P50579 478 aaKnown RBP eCLIP17.51■□□□□ 0.39
SRRM1-207ENST00000468822 EXOSC10Q01780 885 aaKnown RBP17.51■□□□□ 0.39
SRRM1-207ENST00000468822 ITIH3Q06033 890 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 RTN1Q16799 776 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 TPRNQ4KMQ1 711 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 RARS2Q5T160 578 aaKnown RBP17.51■□□□□ 0.39
SRRM1-207ENST00000468822 ZNF746Q6NUN9 644 aaPredicted RBP17.51■□□□□ 0.39
SRRM1-207ENST00000468822 EFCAB12Q6NXP0 572 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 TEX2Q8IWB9 1127 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 ABI1Q8IZP0 508 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 NECTIN4Q96NY8 510 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 ESYT1Q9BSJ8 1104 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 ZNF577Q9BSK1 485 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 RBM28Q9NW13 759 aaKnown RBP17.51■□□□□ 0.39
SRRM1-207ENST00000468822 GABBR1Q9UBS5 961 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 LIMD1Q9UGP4 676 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 AKT3Q9Y243 479 aa17.51■□□□□ 0.39
SRRM1-207ENST00000468822 EPCAMP16422 314 aa17.5■□□□□ 0.39
SRRM1-207ENST00000468822 BCAR1P56945 870 aa17.5■□□□□ 0.39
SRRM1-207ENST00000468822 CES5AQ6NT32 575 aa17.5■□□□□ 0.39
SRRM1-207ENST00000468822 BCL7CQ8WUZ0 217 aaPredicted RBP17.5■□□□□ 0.39
SRRM1-207ENST00000468822 LENG9Q96B70 501 aa17.5■□□□□ 0.39
SRRM1-207ENST00000468822 PCDHA10Q9Y5I2 948 aa17.5■□□□□ 0.39
SRRM1-207ENST00000468822 EP300Q09472 2414 aaPredicted RBP17.5■□□□□ 0.39
SRRM1-207ENST00000468822 MYH9P35579 1960 aaKnown RBP17.49■□□□□ 0.39
SRRM1-207ENST00000468822 A0A0U1RQF3 1178 aa17.49■□□□□ 0.39
SRRM1-207ENST00000468822 ZBTB43O43298 467 aa17.49■□□□□ 0.39
SRRM1-207ENST00000468822 EDIL3O43854 480 aa17.49■□□□□ 0.39
SRRM1-207ENST00000468822 CXCL14O95715 111 aa17.49■□□□□ 0.39
SRRM1-207ENST00000468822 DARSP14868 501 aaKnown RBP17.49■□□□□ 0.39
SRRM1-207ENST00000468822 ZSCAN20P17040 1043 aaPredicted RBP17.49■□□□□ 0.39
SRRM1-207ENST00000468822 GPC3P51654 580 aa17.49■□□□□ 0.39
SRRM1-207ENST00000468822 DRP2Q13474 957 aa17.49■□□□□ 0.39
SRRM1-207ENST00000468822 UGCGQ16739 394 aa17.49■□□□□ 0.39
SRRM1-207ENST00000468822 ASTLQ6HA08 431 aaPredicted RBP17.49■□□□□ 0.39
SRRM1-207ENST00000468822 FRMD5Q7Z6J6 570 aa17.49■□□□□ 0.39
SRRM1-207ENST00000468822 ZBP1Q9H171 429 aa17.49■□□□□ 0.39
SRRM1-207ENST00000468822 TBC1D22BQ9NU19 505 aa17.49■□□□□ 0.39
SRRM1-207ENST00000468822 hCG_1984214I3L0E3 225 aa17.48■□□□□ 0.39
SRRM1-207ENST00000468822 MAGEB2O15479 319 aa17.48■□□□□ 0.39
SRRM1-207ENST00000468822 PSAPP07602 524 aa17.48■□□□□ 0.39
SRRM1-207ENST00000468822 CA8P35219 290 aa17.48■□□□□ 0.39
SRRM1-207ENST00000468822 MTHFRP42898 656 aa17.48■□□□□ 0.39
SRRM1-207ENST00000468822 PRR16Q569H4 304 aa17.48■□□□□ 0.39
SRRM1-207ENST00000468822 CWF19L1Q69YN2 538 aaKnown RBP17.48■□□□□ 0.39
SRRM1-207ENST00000468822 KIAA1841Q6NSI8 718 aa17.48■□□□□ 0.39
SRRM1-207ENST00000468822 SYNE3Q6ZMZ3 975 aa17.48■□□□□ 0.39
SRRM1-207ENST00000468822 SMAP1Q8IYB5 467 aaPredicted RBP17.48■□□□□ 0.39
SRRM1-207ENST00000468822 ZDHHC14Q8IZN3 488 aa17.48■□□□□ 0.39
SRRM1-207ENST00000468822 VPS52Q8N1B4 723 aa17.48■□□□□ 0.39
SRRM1-207ENST00000468822 ZNF713Q8N859 430 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms