RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 CDCA3Q99618 268 aaPredicted RBP19.49■□□□□ 0.71
TRIM56-203ENST00000467847 TMEM117Q9H0C3 514 aa19.49■□□□□ 0.71
TRIM56-203ENST00000467847 SH3GLB2Q9NR46 395 aa19.49■□□□□ 0.71
TRIM56-203ENST00000467847 USP15Q9Y4E8 981 aaPredicted RBP19.49■□□□□ 0.71
TRIM56-203ENST00000467847 ZNF318Q5VUA4 2279 aa19.49■□□□□ 0.71
TRIM56-203ENST00000467847 REC8O95072 547 aa19.48■□□□□ 0.71
TRIM56-203ENST00000467847 EIF4BP23588 611 aaKnown RBP19.48■□□□□ 0.71
TRIM56-203ENST00000467847 PDIA3P30101 505 aaKnown RBP19.48■□□□□ 0.71
TRIM56-203ENST00000467847 SFNP31947 248 aa19.48■□□□□ 0.71
TRIM56-203ENST00000467847 USP11P51784 963 aa19.48■□□□□ 0.71
TRIM56-203ENST00000467847 NLRP5P59047 1200 aa19.48■□□□□ 0.71
TRIM56-203ENST00000467847 RBM10P98175 930 aaKnown RBP19.48■□□□□ 0.71
TRIM56-203ENST00000467847 UGCGQ16739 394 aa19.48■□□□□ 0.71
TRIM56-203ENST00000467847 DUSP6Q16828 381 aa19.48■□□□□ 0.71
TRIM56-203ENST00000467847 LRCH2Q5VUJ6 765 aa19.48■□□□□ 0.71
TRIM56-203ENST00000467847 ABI1Q8IZP0 508 aa19.48■□□□□ 0.71
TRIM56-203ENST00000467847 SLC5A5Q92911 643 aa19.48■□□□□ 0.71
TRIM56-203ENST00000467847 ZNF668Q96K58 619 aaPredicted RBP19.48■□□□□ 0.71
TRIM56-203ENST00000467847 CASD1Q96PB1 797 aa19.48■□□□□ 0.71
TRIM56-203ENST00000467847 TEKT3Q9BXF9 490 aa19.48■□□□□ 0.71
TRIM56-203ENST00000467847 TECTAO75443 2155 aa19.48■□□□□ 0.71
TRIM56-203ENST00000467847 FSCN2O14926 492 aa19.47■□□□□ 0.71
TRIM56-203ENST00000467847 EDIL3O43854 480 aa19.47■□□□□ 0.71
TRIM56-203ENST00000467847 EVCP57679 992 aa19.47■□□□□ 0.71
TRIM56-203ENST00000467847 TBC1D8BQ0IIM8 1120 aa19.47■□□□□ 0.71
TRIM56-203ENST00000467847 PLPP4Q5VZY2 271 aa19.47■□□□□ 0.71
TRIM56-203ENST00000467847 TRIM22Q8IYM9 498 aa19.47■□□□□ 0.71
TRIM56-203ENST00000467847 LRRC43Q8N309 656 aa19.47■□□□□ 0.71
TRIM56-203ENST00000467847 RNF169Q8NCN4 708 aa19.47■□□□□ 0.71
TRIM56-203ENST00000467847 VN1R2Q8NFZ6 395 aa19.47■□□□□ 0.71
TRIM56-203ENST00000467847 GJA10Q969M2 543 aa19.47■□□□□ 0.71
TRIM56-203ENST00000467847 UNC45AQ9H3U1 944 aa19.47■□□□□ 0.71
TRIM56-203ENST00000467847 PUF60Q9UHX1 559 aaKnown RBP19.47■□□□□ 0.71
TRIM56-203ENST00000467847 LZTS1Q9Y250 596 aa19.47■□□□□ 0.71
TRIM56-203ENST00000467847 LOC730098B7Z3J9 87 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 SRGAP2BP0DMP2 458 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 DARSP14868 501 aaKnown RBP19.46■□□□□ 0.71
TRIM56-203ENST00000467847 GPC3P51654 580 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 PTPN5P54829 565 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 PLCB3Q01970 1234 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 KCNT2Q6UVM3 1135 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 LRRC55Q6ZSA7 311 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 ECHDC2Q86YB7 292 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 TBCKQ8TEA7 893 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 NLRP7Q8WX94 980 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 MRPS27Q92552 414 aaKnown RBP19.46■□□□□ 0.71
TRIM56-203ENST00000467847 EDAQ92838 391 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 TCF25Q9BQ70 676 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 PHF7Q9BWX1 381 aaPredicted RBP19.46■□□□□ 0.71
TRIM56-203ENST00000467847 ENTPD7Q9NQZ7 604 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 RNF19AQ9NV58 838 aa19.46■□□□□ 0.71
TRIM56-203ENST00000467847 ST18O60284 1047 aa19.45■□□□□ 0.7
TRIM56-203ENST00000467847 PPM1AP35813 382 aa19.45■□□□□ 0.7
TRIM56-203ENST00000467847 PBX3P40426 434 aa19.45■□□□□ 0.7
TRIM56-203ENST00000467847 SSRP1Q08945 709 aaKnown RBP19.45■□□□□ 0.7
TRIM56-203ENST00000467847 RUFY3Q7L099 469 aa19.45■□□□□ 0.7
TRIM56-203ENST00000467847 ZNF558Q96NG5 402 aa19.45■□□□□ 0.7
TRIM56-203ENST00000467847 C22orf23Q9BZE7 217 aa19.45■□□□□ 0.7
TRIM56-203ENST00000467847 SEPT9Q9UHD8 586 aaPredicted RBP19.45■□□□□ 0.7
TRIM56-203ENST00000467847 PCDHA4Q9UN74 947 aa19.45■□□□□ 0.7
TRIM56-203ENST00000467847 PSMD10O75832 226 aa19.44■□□□□ 0.7
TRIM56-203ENST00000467847 FGFR4P22455 802 aa19.44■□□□□ 0.7
TRIM56-203ENST00000467847 KRT17Q04695 432 aa19.44■□□□□ 0.7
TRIM56-203ENST00000467847 TOB2Q14106 344 aaPredicted RBP19.44■□□□□ 0.7
TRIM56-203ENST00000467847 CBX2Q14781 532 aaPredicted RBP19.44■□□□□ 0.7
TRIM56-203ENST00000467847 Q4G0T1 1027 aa19.44■□□□□ 0.7
TRIM56-203ENST00000467847 MIER3Q7Z3K6 550 aa19.44■□□□□ 0.7
TRIM56-203ENST00000467847 RDM1Q8NG50 284 aa19.44■□□□□ 0.7
TRIM56-203ENST00000467847 RPGRIP1Q96KN7 1286 aa19.44■□□□□ 0.7
TRIM56-203ENST00000467847 PHOX2BQ99453 314 aa19.44■□□□□ 0.7
TRIM56-203ENST00000467847 SPG21Q9NZD8 308 aa19.44■□□□□ 0.7
TRIM56-203ENST00000467847 A0A0U1RQF3 1178 aa19.43■□□□□ 0.7
TRIM56-203ENST00000467847 CPLX1O14810 134 aa19.43■□□□□ 0.7
TRIM56-203ENST00000467847 TDP2O95551 362 aa19.43■□□□□ 0.7
TRIM56-203ENST00000467847 ATF7P17544 494 aaPredicted RBP19.43■□□□□ 0.7
TRIM56-203ENST00000467847 TECP42680 631 aa19.43■□□□□ 0.7
TRIM56-203ENST00000467847 TARBP2Q15633 366 aaKnown RBP19.43■□□□□ 0.7
TRIM56-203ENST00000467847 MTERF2Q49AM1 385 aa19.43■□□□□ 0.7
TRIM56-203ENST00000467847 XKR3Q5GH77 459 aa19.43■□□□□ 0.7
TRIM56-203ENST00000467847 CLLU1OSQ5K130 101 aa19.43■□□□□ 0.7
TRIM56-203ENST00000467847 LLGL2Q6P1M3 1020 aa19.43■□□□□ 0.7
TRIM56-203ENST00000467847 TMEM184AQ6ZMB5 413 aa19.43■□□□□ 0.7
TRIM56-203ENST00000467847 SUGP1Q8IWZ8 645 aaKnown RBP19.43■□□□□ 0.7
TRIM56-203ENST00000467847 SUSD6Q92537 303 aa19.43■□□□□ 0.7
TRIM56-203ENST00000467847 PRRX2Q99811 253 aa19.43■□□□□ 0.7
TRIM56-203ENST00000467847 NGRNQ9NPE2 291 aaKnown RBP19.43■□□□□ 0.7
TRIM56-203ENST00000467847 DACT1Q9NYF0 836 aa19.43■□□□□ 0.7
TRIM56-203ENST00000467847 CYP3A7-CYP3A51PA0A087WV96 503 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 TMEM150BA6NC51 233 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 HIDE1A8MVS5 230 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 CSDE1O75534 798 aaKnown RBP19.42■□□□□ 0.7
TRIM56-203ENST00000467847 DEXIO95424 95 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 EOMESO95936 686 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 CYP3A7P24462 503 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 DNM2P50570 870 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 DRP2Q13474 957 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 KCNC3Q14003 757 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 ANKRD54Q6NXT1 300 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 TRIM67Q6ZTA4 783 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 TMC7Q7Z402 723 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms