RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 VPS52Q8N1B4 723 aa9.09□□□□□ -0.95
APP-214ENST00000466453 ZNF513Q8N8E2 541 aaPredicted RBP9.09□□□□□ -0.95
APP-214ENST00000466453 NSUN6Q8TEA1 469 aaKnown RBP9.09□□□□□ -0.95
APP-214ENST00000466453 TMEM117Q9H0C3 514 aa9.09□□□□□ -0.95
APP-214ENST00000466453 MKNK2Q9HBH9 465 aa9.09□□□□□ -0.95
APP-214ENST00000466453 C1orf112Q9NSG2 853 aa9.09□□□□□ -0.95
APP-214ENST00000466453 ZFP37Q9Y6Q3 630 aaPredicted RBP9.09□□□□□ -0.95
APP-214ENST00000466453 TSC2P49815 1807 aa9.09□□□□□ -0.95
APP-214ENST00000466453 GON4LQ3T8J9 2241 aa9.09□□□□□ -0.95
APP-214ENST00000466453 WDR81Q562E7 1941 aa9.09□□□□□ -0.95
APP-214ENST00000466453 PLIN4Q96Q06 1357 aa9.09□□□□□ -0.95
APP-214ENST00000466453 CCDC171Q6TFL3 1326 aa9.08□□□□□ -0.96
APP-214ENST00000466453 KNTC1P50748 2209 aa9.08□□□□□ -0.96
APP-214ENST00000466453 MYH7P12883 1935 aa9.08□□□□□ -0.96
APP-214ENST00000466453 MTCL1Q9Y4B5 1905 aaKnown RBP9.08□□□□□ -0.96
APP-214ENST00000466453 LNP1A1A4G5 178 aa9.08□□□□□ -0.96
APP-214ENST00000466453 C9IYK1 514 aa9.08□□□□□ -0.96
APP-214ENST00000466453 K7ESF4 209 aa9.08□□□□□ -0.96
APP-214ENST00000466453 MGEA5O60502 916 aa9.08□□□□□ -0.96
APP-214ENST00000466453 SORBS3O60504 671 aa9.08□□□□□ -0.96
APP-214ENST00000466453 PAPLNO95428 1278 aa9.08□□□□□ -0.96
APP-214ENST00000466453 RPLP2P05387 115 aaKnown RBP9.08□□□□□ -0.96
APP-214ENST00000466453 POLGP54098 1239 aaPredicted RBP9.08□□□□□ -0.96
APP-214ENST00000466453 CFHR1Q03591 330 aa9.08□□□□□ -0.96
APP-214ENST00000466453 G3BP1Q13283 466 aaKnown RBP eCLIP9.08□□□□□ -0.96
APP-214ENST00000466453 SLC24A5Q71RS6 500 aa9.08□□□□□ -0.96
APP-214ENST00000466453 CACNA2D4Q7Z3S7 1137 aa9.08□□□□□ -0.96
APP-214ENST00000466453 RAB44Q7Z6P3 723 aaPredicted RBP9.08□□□□□ -0.96
APP-214ENST00000466453 CHCHD4Q8N4Q1 142 aa9.08□□□□□ -0.96
APP-214ENST00000466453 MDM1Q8TC05 714 aa9.08□□□□□ -0.96
APP-214ENST00000466453 DNAJB3Q8WWF6 145 aa9.08□□□□□ -0.96
APP-214ENST00000466453 DDRGK1Q96HY6 314 aa9.08□□□□□ -0.96
APP-214ENST00000466453 TMEM9BQ9NQ34 198 aa9.08□□□□□ -0.96
APP-214ENST00000466453 TMEM161AQ9NX61 479 aa9.08□□□□□ -0.96
APP-214ENST00000466453 ARPP21Q9UBL0 812 aaPredicted RBP9.08□□□□□ -0.96
APP-214ENST00000466453 PNMA2Q9UL42 364 aa9.08□□□□□ -0.96
APP-214ENST00000466453 PI4KAP42356 2102 aa9.08□□□□□ -0.96
APP-214ENST00000466453 EML5Q05BV3 1969 aa9.07□□□□□ -0.96
APP-214ENST00000466453 CCDC195A0A1B0GUA6 201 aa9.07□□□□□ -0.96
APP-214ENST00000466453 MBLAC1A4D2B0 266 aaPredicted RBP9.07□□□□□ -0.96
APP-214ENST00000466453 PYCARD-AS1I3L0S3 204 aa9.07□□□□□ -0.96
APP-214ENST00000466453 CAPN9O14815 690 aa9.07□□□□□ -0.96
APP-214ENST00000466453 INPPL1O15357 1258 aa9.07□□□□□ -0.96
APP-214ENST00000466453 MBD4O95243 580 aa9.07□□□□□ -0.96
APP-214ENST00000466453 UBA1P22314 1058 aaKnown RBP9.07□□□□□ -0.96
APP-214ENST00000466453 HOXA6P31267 233 aa9.07□□□□□ -0.96
APP-214ENST00000466453 SIM1P81133 766 aaPredicted RBP9.07□□□□□ -0.96
APP-214ENST00000466453 HEATR6Q6AI08 1181 aaKnown RBP9.07□□□□□ -0.96
APP-214ENST00000466453 MTSS1LQ765P7 747 aa9.07□□□□□ -0.96
APP-214ENST00000466453 WDR5BQ86VZ2 330 aa9.07□□□□□ -0.96
APP-214ENST00000466453 WDR63Q8IWG1 891 aa9.07□□□□□ -0.96
APP-214ENST00000466453 RGS22Q8NE09 1264 aa9.07□□□□□ -0.96
APP-214ENST00000466453 SMG7Q92540 1137 aaKnown RBP9.07□□□□□ -0.96
APP-214ENST00000466453 ZNF707Q96C28 371 aaPredicted RBP9.07□□□□□ -0.96
APP-214ENST00000466453 CHMP4CQ96CF2 233 aa9.07□□□□□ -0.96
APP-214ENST00000466453 TMEM169Q96HH4 297 aa9.07□□□□□ -0.96
APP-214ENST00000466453 CASD1Q96PB1 797 aa9.07□□□□□ -0.96
APP-214ENST00000466453 MAF1Q9H063 256 aa9.07□□□□□ -0.96
APP-214ENST00000466453 ATP6V0A4Q9HBG4 840 aa9.07□□□□□ -0.96
APP-214ENST00000466453 MAN1C1Q9NR34 630 aa9.07□□□□□ -0.96
APP-214ENST00000466453 RGS18Q9NS28 235 aa9.07□□□□□ -0.96
APP-214ENST00000466453 TLR7Q9NYK1 1049 aaKnown RBP9.07□□□□□ -0.96
APP-214ENST00000466453 DKK4Q9UBT3 224 aa9.07□□□□□ -0.96
APP-214ENST00000466453 TUBE1Q9UJT0 475 aa9.07□□□□□ -0.96
APP-214ENST00000466453 ZNF215Q9UL58 517 aaPredicted RBP9.07□□□□□ -0.96
APP-214ENST00000466453 NF1P21359 2839 aa9.07□□□□□ -0.96
APP-214ENST00000466453 WDR19Q8NEZ3 1342 aa9.06□□□□□ -0.96
APP-214ENST00000466453 SPAARA0A1B0GVQ0 90 aa9.06□□□□□ -0.96
APP-214ENST00000466453 HOXA2O43364 376 aa9.06□□□□□ -0.96
APP-214ENST00000466453 RDXP35241 583 aaKnown RBP9.06□□□□□ -0.96
APP-214ENST00000466453 GAS6Q14393 721 aa9.06□□□□□ -0.96
APP-214ENST00000466453 COLEC12Q5KU26 742 aa9.06□□□□□ -0.96
APP-214ENST00000466453 IER5Q5VY09 327 aa9.06□□□□□ -0.96
APP-214ENST00000466453 KCNV1Q6PIU1 500 aa9.06□□□□□ -0.96
APP-214ENST00000466453 BTNL9Q6UXG8 535 aa9.06□□□□□ -0.96
APP-214ENST00000466453 KBTBD6Q86V97 674 aa9.06□□□□□ -0.96
APP-214ENST00000466453 TRIM50Q86XT4 487 aa9.06□□□□□ -0.96
APP-214ENST00000466453 SPEM1Q8N4L4 309 aa9.06□□□□□ -0.96
APP-214ENST00000466453 GAB3Q8WWW8 586 aa9.06□□□□□ -0.96
APP-214ENST00000466453 TAAR1Q96RJ0 339 aa9.06□□□□□ -0.96
APP-214ENST00000466453 RMDN3Q96TC7 470 aa9.06□□□□□ -0.96
APP-214ENST00000466453 SLC32A1Q9H598 525 aa9.06□□□□□ -0.96
APP-214ENST00000466453 ELAC1Q9H777 363 aaKnown RBP9.06□□□□□ -0.96
APP-214ENST00000466453 SMC4Q9NTJ3 1288 aa9.06□□□□□ -0.96
APP-214ENST00000466453 RNF19AQ9NV58 838 aa9.06□□□□□ -0.96
APP-214ENST00000466453 COL20A1Q9P218 1284 aa9.06□□□□□ -0.96
APP-214ENST00000466453 NDRG2Q9UN36 371 aaKnown RBP9.06□□□□□ -0.96
APP-214ENST00000466453 TRPV2Q9Y5S1 764 aa9.06□□□□□ -0.96
APP-214ENST00000466453 DOCK5Q9H7D0 1870 aa9.06□□□□□ -0.96
APP-214ENST00000466453 PCNX1Q96RV3 2341 aa9.05□□□□□ -0.96
APP-214ENST00000466453 DENND3A2RUS2 1198 aa9.05□□□□□ -0.96
APP-214ENST00000466453 CDX4O14627 284 aaPredicted RBP9.05□□□□□ -0.96
APP-214ENST00000466453 KLRC2P26717 231 aa9.05□□□□□ -0.96
APP-214ENST00000466453 ALDH7A1P49419 539 aaKnown RBP9.05□□□□□ -0.96
APP-214ENST00000466453 SP2Q02086 613 aa9.05□□□□□ -0.96
APP-214ENST00000466453 TTF1Q15361 905 aaPredicted RBP9.05□□□□□ -0.96
APP-214ENST00000466453 SYDE2Q5VT97 1194 aa9.05□□□□□ -0.96
APP-214ENST00000466453 TMEM173Q86WV6 379 aaPredicted RBP9.05□□□□□ -0.96
APP-214ENST00000466453 SCUBE3Q8IX30 993 aa9.05□□□□□ -0.96
APP-214ENST00000466453 SYTL5Q8TDW5 730 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms