RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 OTUD7AQ8TE49 926 aaPredicted RBP16.86■□□□□ 0.29
HMGXB4-206ENST00000466438 ATRIPQ8WXE1 791 aa16.86■□□□□ 0.29
HMGXB4-206ENST00000466438 AUTS2Q8WXX7 1259 aa16.86■□□□□ 0.29
HMGXB4-206ENST00000466438 FAM227BQ96M60 508 aa16.86■□□□□ 0.29
HMGXB4-206ENST00000466438 PIGSQ96S52 555 aa16.86■□□□□ 0.29
HMGXB4-206ENST00000466438 EPC1Q9H2F5 836 aa16.86■□□□□ 0.29
HMGXB4-206ENST00000466438 SH2B1Q9NRF2 756 aaPredicted RBP16.86■□□□□ 0.29
HMGXB4-206ENST00000466438 MAD2L2Q9UI95 211 aa16.86■□□□□ 0.29
HMGXB4-206ENST00000466438 ALDH7A1P49419 539 aaKnown RBP16.85■□□□□ 0.29
HMGXB4-206ENST00000466438 METAP2P50579 478 aaKnown RBP eCLIP16.85■□□□□ 0.29
HMGXB4-206ENST00000466438 POLGP54098 1239 aaPredicted RBP16.85■□□□□ 0.29
HMGXB4-206ENST00000466438 COL9A3Q14050 684 aaPredicted RBP16.85■□□□□ 0.29
HMGXB4-206ENST00000466438 SLC35G1Q2M3R5 365 aa16.85■□□□□ 0.29
HMGXB4-206ENST00000466438 ZNF589Q86UQ0 364 aaPredicted RBP16.85■□□□□ 0.29
HMGXB4-206ENST00000466438 FAM228AQ86W67 206 aa16.85■□□□□ 0.29
HMGXB4-206ENST00000466438 EVI5LQ96CN4 794 aa16.85■□□□□ 0.29
HMGXB4-206ENST00000466438 RIOX1Q9H6W3 641 aa16.85■□□□□ 0.29
HMGXB4-206ENST00000466438 EPS15L1Q9UBC2 864 aa16.85■□□□□ 0.29
HMGXB4-206ENST00000466438 PALM3A6NDB9 673 aaPredicted RBP16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 B4E1Z4 1266 aa16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 NT5C1B-RDH14C9J2C7 533 aa16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 ZNF213O14771 459 aa16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 LAMTOR5O43504 91 aa16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 MX1P20591 662 aa16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 GBP2P32456 591 aaPredicted RBP16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 BCAR1P56945 870 aa16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 CLLU1OSQ5K130 101 aa16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 DCLRE1AQ6PJP8 1040 aa16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 ZBTB44Q8NCP5 570 aa16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 SMARCC2Q8TAQ2 1214 aa16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 FOXQ1Q9C009 403 aa16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 ZSWIM5Q9P217 1185 aa16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 ANKRD11Q6UB99 2663 aaPredicted RBP16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 LAMA4Q16363 1823 aa16.84■□□□□ 0.29
HMGXB4-206ENST00000466438 PNMA6FA0A0J9YX94 578 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 SLC30A4O14863 429 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 ITGB5P18084 799 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 KLRC1P26715 233 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 FASNP49327 2511 aaKnown RBP16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 CRYBB1P53674 252 aaPredicted RBP16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 PTPN14Q15678 1187 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 IFIT1BQ5T764 474 aaKnown RBP16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 PLPPR4Q7Z2D5 763 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 ECHDC2Q86YB7 292 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 KIAA0319LQ8IZA0 1049 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 NETO1Q8TDF5 533 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 STAMQ92783 540 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 MRPL9Q9BYD2 267 aaKnown RBP16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 JPH1Q9HDC5 661 aaPredicted RBP16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 PARD6AQ9NPB6 346 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 SLC2A4RGQ9NR83 387 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 SPATA6Q9NWH7 488 aaPredicted RBP16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 PKD2L1Q9P0L9 805 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 ANGPTL2Q9UKU9 493 aa16.83■□□□□ 0.28
HMGXB4-206ENST00000466438 PATJQ8NI35 1801 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 LILRB5O75023 590 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 LRRN2O75325 713 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 HOXB3P14651 431 aaPredicted RBP16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 STARD6P59095 220 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 MTMR1Q13613 665 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 DDX53Q86TM3 631 aaKnown RBP16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 CMASQ8NFW8 434 aaPredicted RBP16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 CUL5Q93034 780 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 COL26A1Q96A83 441 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 SHDQ96IW2 340 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 OSMRQ99650 979 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 UBAC1Q9BSL1 405 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 BCO2Q9BYV7 579 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 WDR6Q9NNW5 1121 aaKnown RBP16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 ZSCAN32Q9NX65 697 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 GMEB2Q9UKD1 530 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 MIA3Q5JRA6 1907 aa16.82■□□□□ 0.28
HMGXB4-206ENST00000466438 CLUHO75153 1309 aa16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 CARNS1A5YM72 827 aa16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 PIK3CDO00329 1044 aa16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 CYTH3O43739 400 aa16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 TBC1D4O60343 1298 aa16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 IGHDP01880 384 aa16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 STAT5BP51692 787 aa16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 CLCN4P51793 760 aa16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 CSTF1Q05048 431 aaKnown RBP16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 KIZQ2M2Z5 673 aa16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 USP17L6PQ6QN14 398 aa16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 TMEM173Q86WV6 379 aaPredicted RBP16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 RNF169Q8NCN4 708 aa16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 SLC9A2Q9UBY0 812 aa16.81■□□□□ 0.28
HMGXB4-206ENST00000466438 MEIS2O14770 477 aa16.8■□□□□ 0.28
HMGXB4-206ENST00000466438 MAFGO15525 162 aa16.8■□□□□ 0.28
HMGXB4-206ENST00000466438 ZSCAN20P17040 1043 aaPredicted RBP16.8■□□□□ 0.28
HMGXB4-206ENST00000466438 SLC26A2P50443 739 aa16.8■□□□□ 0.28
HMGXB4-206ENST00000466438 CYP26C1Q6V0L0 522 aa16.8■□□□□ 0.28
HMGXB4-206ENST00000466438 TICAM2Q86XR7 235 aa16.8■□□□□ 0.28
HMGXB4-206ENST00000466438 HELQQ8TDG4 1101 aa16.8■□□□□ 0.28
HMGXB4-206ENST00000466438 NELL1Q92832 810 aa16.8■□□□□ 0.28
HMGXB4-206ENST00000466438 IGSF21Q96ID5 467 aa16.8■□□□□ 0.28
HMGXB4-206ENST00000466438 MYADMQ96S97 322 aa16.8■□□□□ 0.28
HMGXB4-206ENST00000466438 PPP1R16BQ96T49 567 aa16.8■□□□□ 0.28
HMGXB4-206ENST00000466438 EMILIN2Q9BXX0 1053 aa16.8■□□□□ 0.28
HMGXB4-206ENST00000466438 RHOBTB2Q9BYZ6 727 aa16.8■□□□□ 0.28
HMGXB4-206ENST00000466438 UBIAD1Q9Y5Z9 338 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms