RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 NOSTRINQ8IVI9 506 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 DIS3L2Q8IYB7 885 aaKnown RBP7.83□□□□□ -1.16
CLDN4-204ENST00000466411 SLFN12Q8IYM2 578 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 SMRP1Q8NCR6 262 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 SDF4Q9BRK5 362 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 KATNAL1Q9BW62 490 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 WDR11Q9BZH6 1224 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 FTOQ9C0B1 505 aaKnown RBP eCLIP7.83□□□□□ -1.16
CLDN4-204ENST00000466411 CLEC1BQ9P126 229 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 COL20A1Q9P218 1284 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 LIMD1Q9UGP4 676 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 CD207Q9UJ71 328 aa7.83□□□□□ -1.16
CLDN4-204ENST00000466411 NFASCO94856 1347 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 LOXHD1Q8IVV2 1947 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 CYP3A7-CYP3A51PA0A087WV96 503 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 M0R2N6 131 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 NOP56O00567 594 aaKnown RBP7.82□□□□□ -1.16
CLDN4-204ENST00000466411 JAK2O60674 1132 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 CD2BP2O95400 341 aaKnown RBP7.82□□□□□ -1.16
CLDN4-204ENST00000466411 BAG4O95429 457 aaKnown RBP7.82□□□□□ -1.16
CLDN4-204ENST00000466411 LMNAP02545 664 aaKnown RBP7.82□□□□□ -1.16
CLDN4-204ENST00000466411 LINC00271P0C7V0 271 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 FDPSP14324 419 aaKnown RBP7.82□□□□□ -1.16
CLDN4-204ENST00000466411 CYP3A7P24462 503 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 U2AF2P26368 475 aaKnown RBP eCLIP7.82□□□□□ -1.16
CLDN4-204ENST00000466411 GPM6BQ13491 265 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 UBE2SQ16763 222 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 Q4G0T1 1027 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 METTL7BQ6UX53 244 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 TLK2Q86UE8 772 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 FBXO16Q8IX29 292 aaPredicted RBP7.82□□□□□ -1.16
CLDN4-204ENST00000466411 SMAP1Q8IYB5 467 aaPredicted RBP7.82□□□□□ -1.16
CLDN4-204ENST00000466411 CRYGNQ8WXF5 182 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 RIT2Q99578 217 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 MXRA8Q9BRK3 442 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 RAB34Q9BZG1 259 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 SEMA4AQ9H3S1 761 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 ZSCAN16Q9H4T2 348 aaPredicted RBP7.82□□□□□ -1.16
CLDN4-204ENST00000466411 JADE2Q9NQC1 790 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 CEP131Q9UPN4 1083 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 INSL6Q9Y581 213 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 ATP6V1DQ9Y5K8 247 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 MYH15Q9Y2K3 1946 aa7.82□□□□□ -1.16
CLDN4-204ENST00000466411 NAV2Q8IVL1 2488 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 ABHD14A-ACY1A0A1B0GW23 586 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 SPATA31C2B4DYI2 1134 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 MEIS1O00470 390 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 HRO43593 1189 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 DKC1O60832 514 aaKnown RBP eCLIP7.81□□□□□ -1.16
CLDN4-204ENST00000466411 NBNO60934 754 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 PPFIA4O75335 1185 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 RPLP2P05387 115 aaKnown RBP7.81□□□□□ -1.16
CLDN4-204ENST00000466411 SMPD1P17405 629 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 SFNP31947 248 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 SLC26A2P50443 739 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 KRT76Q01546 638 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 COASYQ13057 564 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 CAMK1Q14012 370 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 DGKDQ16760 1214 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 JAKMIP3Q5VZ66 844 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 ATL3Q6DD88 541 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 TAPT1Q6NXT6 567 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 CCDC62Q6P9F0 684 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 CNKSR3Q6P9H4 555 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 SEPT14Q6ZU15 432 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 DHX37Q8IY37 1157 aaKnown RBP7.81□□□□□ -1.16
CLDN4-204ENST00000466411 CRIPAKQ8N1N5 446 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 DCLK2Q8N568 766 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 RDM1Q8NG50 284 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 PPTC7Q8NI37 304 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 TBCKQ8TEA7 893 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 TBC1D5Q92609 795 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 FAM20AQ96MK3 541 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 PHF7Q9BWX1 381 aaPredicted RBP7.81□□□□□ -1.16
CLDN4-204ENST00000466411 MLXIPQ9HAP2 919 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 KCNH7Q9NS40 1196 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 DDX41Q9UJV9 622 aaKnown RBP7.81□□□□□ -1.16
CLDN4-204ENST00000466411 ZNF215Q9UL58 517 aaPredicted RBP7.81□□□□□ -1.16
CLDN4-204ENST00000466411 UBIAD1Q9Y5Z9 338 aa7.81□□□□□ -1.16
CLDN4-204ENST00000466411 A6NJR5 290 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 C5orf67F2Z3F1 127 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 IPO5O00410 1097 aaKnown RBP7.8□□□□□ -1.16
CLDN4-204ENST00000466411 DYNC1LI2O43237 492 aaPredicted RBP7.8□□□□□ -1.16
CLDN4-204ENST00000466411 STX6O43752 255 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 MARCH6O60337 910 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 NEMFO60524 1076 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 CCNT1O60563 726 aaKnown RBP7.8□□□□□ -1.16
CLDN4-204ENST00000466411 UBA1P22314 1058 aaKnown RBP7.8□□□□□ -1.16
CLDN4-204ENST00000466411 GCGRP47871 477 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 CLCN5P51795 746 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 MRPS9P82933 396 aaKnown RBP7.8□□□□□ -1.16
CLDN4-204ENST00000466411 PURAQ00577 322 aaKnown RBP7.8□□□□□ -1.16
CLDN4-204ENST00000466411 PTPN11Q06124 597 aaPredicted RBP7.8□□□□□ -1.16
CLDN4-204ENST00000466411 ST3GAL1Q11201 340 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 NPY5RQ15761 445 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 TMEM266Q2M3C6 531 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 CELF3Q5SZQ8 465 aaKnown RBP7.8□□□□□ -1.16
CLDN4-204ENST00000466411 KIAA0319Q5VV43 1072 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 MCTP1Q6DN14 999 aa7.8□□□□□ -1.16
CLDN4-204ENST00000466411 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms