RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 H2AFY2Q9P0M6 372 aaPredicted RBP6.81□□□□□ -1.32
CACNA1C-223ENST00000465278 SRPK3Q9UPE1 567 aa6.81□□□□□ -1.32
CACNA1C-223ENST00000465278 ATP23Q9Y6H3 246 aa6.81□□□□□ -1.32
CACNA1C-223ENST00000465278 ALS2Q96Q42 1657 aa6.81□□□□□ -1.32
CACNA1C-223ENST00000465278 GAS7O60861 476 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 ATP2A2P16615 1042 aaKnown RBP6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 POU3F3P20264 500 aaPredicted RBP6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 STAT5AP42229 794 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 ID4P47928 161 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 ARHGAP44Q17R89 818 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 TRIM48Q8IWZ4 208 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 NLGN4XQ8N0W4 816 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 FAM26EQ8N5C1 309 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 CHTF18Q8WVB6 975 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 KCNN1Q92952 543 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 TSPAN17Q96FV3 270 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 SYT3Q9BQG1 590 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 YIPF4Q9BSR8 244 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 CNTD2Q9H8S5 307 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 ZNF652Q9Y2D9 606 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 BTAF1O14981 1849 aa6.8□□□□□ -1.32
CACNA1C-223ENST00000465278 TRPM1Q7Z4N2 1603 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 SLC9A1P19634 815 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 IBSPP21815 317 aaPredicted RBP6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 PMLP29590 882 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 IL2P60568 153 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 IRF9Q00978 393 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 TMEM132BQ14DG7 1078 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 CYP4F22Q6NT55 531 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 HHIPL2Q6UWX4 724 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 CD300LDQ6UXZ3 194 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 LDHDQ86WU2 507 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 DDX42Q86XP3 938 aaKnown RBP eCLIP6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 KIF18BQ86Y91 864 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 OR2W6PQ8NHA6 318 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 ATL2Q8NHH9 583 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 PHOSPHO1Q8TCT1 267 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 USP7Q93009 1102 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 FAM122AQ96E09 287 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 OXSMQ9NWU1 459 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 NUB1Q9Y5A7 615 aa6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 N4BP2Q86UW6 1770 aaPredicted RBP6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 TRPM3Q9HCF6 1732 aaPredicted RBP6.79□□□□□ -1.32
CACNA1C-223ENST00000465278 TRIOBPQ9H2D6 2365 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 ACOT7O00154 380 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 NEMP1O14524 444 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 DVL2O14641 736 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 ASGR2P07307 311 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 PTPN1P18031 435 aaKnown RBP6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 MC3RP41968 323 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 EPHA5P54756 1037 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 DSG1Q02413 1049 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 OLFML2BQ68BL8 750 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 LHFPL2Q6ZUX7 228 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 OTOP1Q7RTM1 612 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 PTF1AQ7RTS3 328 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 ZCRB1Q8TBF4 217 aaKnown RBP6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 ORAI3Q9BRQ5 295 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 BOCQ9BWV1 1114 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 TMX1Q9H3N1 280 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 SPTLC3Q9NUV7 552 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 RBPJLQ9UBG7 517 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 TIAM2Q8IVF5 1701 aa6.78□□□□□ -1.32
CACNA1C-223ENST00000465278 PKD1L2Q7Z442 2459 aa6.77□□□□□ -1.32
CACNA1C-223ENST00000465278 COL18A1P39060 1754 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 BUB1BO60566 1050 aaPredicted RBP6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 CLASP2O75122 1294 aaKnown RBP6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 FKBP9O95302 570 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 LRG1P02750 347 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 ATF2P15336 505 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 ADCYAP1R1P41586 468 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 CDR1P51861 262 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 MAP2K1Q02750 393 aaPredicted RBP6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 DHCR24Q15392 516 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 ZNF827Q17R98 1081 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 PAN2Q504Q3 1202 aaKnown RBP6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 XP32Q5T750 250 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 FKBP9P1Q75LS8 142 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 STK32CQ86UX6 486 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 NOSTRINQ8IVI9 506 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 AFAP1L2Q8N4X5 818 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 TOE1Q96GM8 510 aaKnown RBP6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 MBD1Q9UIS9 605 aaPredicted RBP6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 ATP8A1Q9Y2Q0 1164 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 CCDC18Q5T9S5 1454 aa6.77□□□□□ -1.33
CACNA1C-223ENST00000465278 IGSF1Q8N6C5 1336 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 BCL9O00512 1426 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 H7C1D1 291 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 PEX10O60683 326 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 EYA4O95677 639 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 NCAM1P13591 858 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 FAHP16930 419 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 KPNA1P52294 538 aaPredicted RBP6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 KIF11P52732 1056 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 EPHB3P54753 998 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 FIGNQ5HY92 759 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 MCTP1Q6DN14 999 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 ETV3LQ6ZN32 361 aa6.76□□□□□ -1.33
CACNA1C-223ENST00000465278 AMIGO3Q86WK7 504 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms